Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 MIR5000-201ENST00000577717 103 ntBASIC1.34□□□□□ -2.19
PTPN18Q99952 MIR1297-201ENST00000637311 77 ntBASIC1.34□□□□□ -2.19
PTPN18Q99952 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
PTPN18Q99952 RNU6-664P-201ENST00000362381 107 ntBASIC1.33□□□□□ -2.2
PTPN18Q99952 RNU6-161P-201ENST00000363051 106 ntBASIC1.33□□□□□ -2.2
PTPN18Q99952 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PTPN18Q99952 RNU7-56P-201ENST00000458744 62 ntBASIC1.33□□□□□ -2.2
PTPN18Q99952 RNU6-523P-201ENST00000516304 54 ntBASIC1.33□□□□□ -2.2
PTPN18Q99952 RNU6-1265P-201ENST00000516342 103 ntBASIC1.33□□□□□ -2.2
PTPN18Q99952 MIR4696-201ENST00000581431 70 ntBASIC1.33□□□□□ -2.2
PTPN18Q99952 AC027335.2-201ENST00000624030 375 ntBASIC1.33□□□□□ -2.2
PTPN18Q99952 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PTPN18Q99952 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
PTPN18Q99952 Y_RNA.239-201ENST00000364444 113 ntBASIC1.32□□□□□ -2.2
PTPN18Q99952 Y_RNA.374-201ENST00000365606 101 ntBASIC1.32□□□□□ -2.2
PTPN18Q99952 RNU6-291P-201ENST00000384720 107 ntBASIC1.32□□□□□ -2.2
PTPN18Q99952 AL606490.4-201ENST00000423117 127 ntBASIC1.32□□□□□ -2.2
PTPN18Q99952 MIR4804-201ENST00000581683 73 ntBASIC1.32□□□□□ -2.2
PTPN18Q99952 RNU6-208P-201ENST00000362431 107 ntBASIC1.31□□□□□ -2.2
PTPN18Q99952 MIR599-201ENST00000385069 95 ntBASIC1.31□□□□□ -2.2
PTPN18Q99952 MIR889-201ENST00000401280 79 ntBASIC1.31□□□□□ -2.2
PTPN18Q99952 Y_RNA.596-201ENST00000410462 109 ntBASIC1.31□□□□□ -2.2
PTPN18Q99952 AC074348.1-201ENST00000426503 132 ntBASIC1.31□□□□□ -2.2
PTPN18Q99952 AC015818.7-201ENST00000428754 109 ntBASIC1.31□□□□□ -2.2
PTPN18Q99952 RNU6-1108P-201ENST00000516308 104 ntBASIC1.31□□□□□ -2.2
PTPN18Q99952 RNY4P3-201ENST00000365254 95 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 RNU6-1051P-201ENST00000365471 102 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 SNORD101-201ENST00000384027 73 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 RNU6-364P-201ENST00000384387 107 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 Y_RNA.565-201ENST00000384719 101 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 RNU6-535P-201ENST00000384722 107 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 AC067940.1-201ENST00000458411 300 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 RNU6-807P-201ENST00000516805 107 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 RNU6-303P-201ENST00000517091 106 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 AC008608.1-201ENST00000603910 127 ntBASIC1.3□□□□□ -2.2
PTPN18Q99952 RNA5SP245-201ENST00000364239 121 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 Y_RNA.532-201ENST00000384590 113 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 SNORD90-201ENST00000391145 111 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 AC002429.1-201ENST00000437672 148 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 SCARNA18B-201ENST00000458806 135 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 RNU7-102P-201ENST00000458948 62 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 YWHAEP2-201ENST00000580066 112 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 YWHAEP3-201ENST00000582767 121 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 U6.100-201ENST00000636230 99 ntBASIC1.29□□□□□ -2.2
PTPN18Q99952 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PTPN18Q99952 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.28□□□□□ -2.2
PTPN18Q99952 Y_RNA.788-201ENST00000622394 112 ntBASIC1.28□□□□□ -2.2
PTPN18Q99952 MIR1-1-201ENST00000362147 71 ntBASIC1.27□□□□□ -2.21
PTPN18Q99952 MIR1827-201ENST00000408549 66 ntBASIC1.27□□□□□ -2.21
PTPN18Q99952 snoU13.17-201ENST00000458802 104 ntBASIC1.27□□□□□ -2.21
PTPN18Q99952 RNU6-977P-201ENST00000516411 103 ntBASIC1.27□□□□□ -2.21
PTPN18Q99952 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.27□□□□□ -2.21
PTPN18Q99952 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.27□□□□□ -2.21
PTPN18Q99952 RNU5F-1-201ENST00000362507 117 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 Y_RNA.174-201ENST00000363781 105 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 SNORD115-44-201ENST00000365391 82 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 RNU6-411P-201ENST00000384451 107 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 RNU1-119P-201ENST00000391122 165 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 RNU6-935P-201ENST00000410371 100 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 Y_RNA.606-201ENST00000410579 103 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 MIR3134-201ENST00000579433 74 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 MIR3973-201ENST00000579824 107 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 uc_338.16-201ENST00000621804 95 ntBASIC1.26□□□□□ -2.21
PTPN18Q99952 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
PTPN18Q99952 Y_RNA.207-201ENST00000364142 106 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 SNORA24B-201ENST00000384176 131 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 RNU6-788P-201ENST00000390967 104 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 U3.27-201ENST00000391237 200 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 MIR942-201ENST00000401111 86 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 RNU2-59P-201ENST00000410482 191 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 RN7SL793P-201ENST00000583259 296 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 AC211469.2-201ENST00000605461 205 ntBASIC1.25□□□□□ -2.21
PTPN18Q99952 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PTPN18Q99952 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PTPN18Q99952 Y_RNA.12-201ENST00000362393 112 ntBASIC1.24□□□□□ -2.21
PTPN18Q99952 MIR100-201ENST00000385259 80 ntBASIC1.24□□□□□ -2.21
PTPN18Q99952 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
PTPN18Q99952 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.24□□□□□ -2.21
PTPN18Q99952 RNA5SP403-201ENST00000363598 108 ntBASIC1.23□□□□□ -2.21
PTPN18Q99952 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
PTPN18Q99952 AC097510.1-201ENST00000510945 133 ntBASIC1.23□□□□□ -2.21
PTPN18Q99952 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
PTPN18Q99952 RNU6-340P-201ENST00000364005 107 ntBASIC1.22□□□□□ -2.21
PTPN18Q99952 AC114801.3-201ENST00000510231 177 ntBASIC1.22□□□□□ -2.21
PTPN18Q99952 Y_RNA.681-201ENST00000516445 113 ntBASIC1.22□□□□□ -2.21
PTPN18Q99952 CYP3A137P-201ENST00000562436 69 ntBASIC1.22□□□□□ -2.21
PTPN18Q99952 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PTPN18Q99952 RNU6-681P-201ENST00000364012 104 ntBASIC1.21□□□□□ -2.22
PTPN18Q99952 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
PTPN18Q99952 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PTPN18Q99952 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PTPN18Q99952 FABP5P4-201ENST00000437203 171 ntBASIC1.21□□□□□ -2.22
PTPN18Q99952 RNU6-287P-201ENST00000516230 98 ntBASIC1.21□□□□□ -2.22
PTPN18Q99952 RNU6-687P-201ENST00000516443 89 ntBASIC1.21□□□□□ -2.22
PTPN18Q99952 RNU6-1110P-201ENST00000516462 101 ntBASIC1.21□□□□□ -2.22
PTPN18Q99952 SNORA31.14-201ENST00000516728 116 ntBASIC1.21□□□□□ -2.22
PTPN18Q99952 MIR3140-201ENST00000583685 90 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms