Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR652-201ENST00000385278 98 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 MIR1263-201ENST00000408324 86 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 RNU7-120P-201ENST00000459334 63 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 RNU7-55P-201ENST00000459426 62 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 AP000676.1-201ENST00000533307 52 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.77□□□□□ -2.53
VPS35Q96QK1 RNU6-682P-201ENST00000363843 106 ntBASIC-0.78□□□□□ -2.53
VPS35Q96QK1 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.78□□□□□ -2.53
VPS35Q96QK1 AL445193.1-201ENST00000441183 141 ntBASIC-0.78□□□□□ -2.53
VPS35Q96QK1 AC244090.1-201ENST00000441884 93 ntBASIC-0.78□□□□□ -2.53
VPS35Q96QK1 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.78□□□□□ -2.53
VPS35Q96QK1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.78□□□□□ -2.53
VPS35Q96QK1 MIR6851-201ENST00000617060 67 ntBASIC-0.78□□□□□ -2.53
VPS35Q96QK1 RNU6-363P-201ENST00000362895 105 ntBASIC-0.79□□□□□ -2.54
VPS35Q96QK1 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.79□□□□□ -2.54
VPS35Q96QK1 AC096720.1-201ENST00000604441 183 ntBASIC-0.79□□□□□ -2.54
VPS35Q96QK1 SNORD114-15-201ENST00000364687 72 ntBASIC-0.8□□□□□ -2.54
VPS35Q96QK1 RNU6-466P-201ENST00000391224 103 ntBASIC-0.8□□□□□ -2.54
VPS35Q96QK1 MIR513C-201ENST00000401352 84 ntBASIC-0.8□□□□□ -2.54
VPS35Q96QK1 AL353813.1-201ENST00000440700 253 ntBASIC-0.8□□□□□ -2.54
VPS35Q96QK1 snoU13.13-201ENST00000458842 104 ntBASIC-0.8□□□□□ -2.54
VPS35Q96QK1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.8□□□□□ -2.54
VPS35Q96QK1 AP001328.1-201ENST00000528550 176 ntBASIC-0.8□□□□□ -2.54
VPS35Q96QK1 RNU6-86P-201ENST00000606534 107 ntBASIC-0.8□□□□□ -2.54
VPS35Q96QK1 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 SNORD95.1-201ENST00000364099 68 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 SNORD101-201ENST00000384027 73 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 SNORA81.3-201ENST00000517283 198 ntBASIC-0.81□□□□□ -2.54
VPS35Q96QK1 RNU6-409P-201ENST00000384114 104 ntBASIC-0.82□□□□□ -2.54
VPS35Q96QK1 MIR216B-201ENST00000390186 82 ntBASIC-0.82□□□□□ -2.54
VPS35Q96QK1 SNORD115-25-201ENST00000362619 82 ntBASIC-0.83□□□□□ -2.54
VPS35Q96QK1 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.83□□□□□ -2.54
VPS35Q96QK1 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.83□□□□□ -2.54
VPS35Q96QK1 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.83□□□□□ -2.54
VPS35Q96QK1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.83□□□□□ -2.54
VPS35Q96QK1 AP001340.1-201ENST00000624405 217 ntBASIC-0.83□□□□□ -2.54
VPS35Q96QK1 RNU6-200P-201ENST00000364743 107 ntBASIC-0.84□□□□□ -2.54
VPS35Q96QK1 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.84□□□□□ -2.54
VPS35Q96QK1 RNU6-901P-201ENST00000384593 106 ntBASIC-0.84□□□□□ -2.54
VPS35Q96QK1 MIR4696-201ENST00000581431 70 ntBASIC-0.84□□□□□ -2.54
VPS35Q96QK1 MIR548O2-201ENST00000616090 70 ntBASIC-0.84□□□□□ -2.54
VPS35Q96QK1 RNU6-664P-201ENST00000362381 107 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 RNY4P3-201ENST00000365254 95 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 MIR582-201ENST00000365731 98 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 SNORD116-18-201ENST00000383961 92 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 RNU6-463P-201ENST00000384340 107 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 MIR204-201ENST00000385200 110 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 snoU13.19-201ENST00000459148 104 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 RNU6-138P-201ENST00000515952 107 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.85□□□□□ -2.55
VPS35Q96QK1 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 RNU6-935P-201ENST00000410371 100 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 AL158147.1-201ENST00000443970 75 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 snoU13.11-201ENST00000459219 104 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 AC097510.1-201ENST00000510945 133 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 AC021146.6-201ENST00000514659 117 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 RNU6-781P-201ENST00000516377 101 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 RNU6-881P-201ENST00000516813 102 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 AL442128.1-201ENST00000615151 90 ntBASIC-0.86□□□□□ -2.55
VPS35Q96QK1 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.87□□□□□ -2.55
VPS35Q96QK1 RNU6-235P-201ENST00000362644 107 ntBASIC-0.87□□□□□ -2.55
VPS35Q96QK1 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.87□□□□□ -2.55
VPS35Q96QK1 MIR548E-201ENST00000408287 88 ntBASIC-0.87□□□□□ -2.55
VPS35Q96QK1 RNU6-721P-201ENST00000410155 105 ntBASIC-0.87□□□□□ -2.55
VPS35Q96QK1 SNORA13-201ENST00000458790 133 ntBASIC-0.87□□□□□ -2.55
VPS35Q96QK1 SNORA40.17-201ENST00000517256 115 ntBASIC-0.87□□□□□ -2.55
VPS35Q96QK1 RNU6-973P-201ENST00000364690 107 ntBASIC-0.88□□□□□ -2.55
VPS35Q96QK1 RNU6-476P-201ENST00000384726 107 ntBASIC-0.88□□□□□ -2.55
VPS35Q96QK1 MT-TQ-201ENST00000387372 72 ntBASIC-0.88□□□□□ -2.55
VPS35Q96QK1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.88□□□□□ -2.55
VPS35Q96QK1 MIR548X2-201ENST00000579776 100 ntBASIC-0.88□□□□□ -2.55
VPS35Q96QK1 MIR3681-201ENST00000580089 72 ntBASIC-0.88□□□□□ -2.55
VPS35Q96QK1 U7.2-201ENST00000607576 63 ntBASIC-0.88□□□□□ -2.55
VPS35Q96QK1 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.89□□□□□ -2.55
VPS35Q96QK1 RNY4P6-201ENST00000363667 96 ntBASIC-0.89□□□□□ -2.55
VPS35Q96QK1 RNU4-36P-201ENST00000364294 144 ntBASIC-0.89□□□□□ -2.55
VPS35Q96QK1 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.89□□□□□ -2.55
VPS35Q96QK1 RNU6-816P-201ENST00000390914 107 ntBASIC-0.89□□□□□ -2.55
VPS35Q96QK1 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.89□□□□□ -2.55
VPS35Q96QK1 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.89□□□□□ -2.55
VPS35Q96QK1 MIR5704-201ENST00000584029 77 ntBASIC-0.89□□□□□ -2.55
VPS35Q96QK1 RNU6-502P-201ENST00000362419 108 ntBASIC-0.9□□□□□ -2.55
VPS35Q96QK1 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.9□□□□□ -2.55
VPS35Q96QK1 RNU6-379P-201ENST00000363813 104 ntBASIC-0.9□□□□□ -2.55
VPS35Q96QK1 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.9□□□□□ -2.55
VPS35Q96QK1 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.9□□□□□ -2.55
VPS35Q96QK1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
VPS35Q96QK1 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.9□□□□□ -2.55
VPS35Q96QK1 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms