Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC090617.8-201ENST00000623339 167 ntBASIC-2.53□□□□□ -2.81
CCDC42Q96M95 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.54□□□□□ -2.82
CCDC42Q96M95 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.54□□□□□ -2.82
CCDC42Q96M95 SNORA7.5-201ENST00000410672 110 ntBASIC-2.54□□□□□ -2.82
CCDC42Q96M95 MIR6129-201ENST00000616087 109 ntBASIC-2.54□□□□□ -2.82
CCDC42Q96M95 RNU6-990P-201ENST00000364385 104 ntBASIC-2.55□□□□□ -2.82
CCDC42Q96M95 RNU6-275P-201ENST00000364910 107 ntBASIC-2.55□□□□□ -2.82
CCDC42Q96M95 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.55□□□□□ -2.82
CCDC42Q96M95 MIR889-201ENST00000401280 79 ntBASIC-2.55□□□□□ -2.82
CCDC42Q96M95 MIR548H3-201ENST00000408771 118 ntBASIC-2.55□□□□□ -2.82
CCDC42Q96M95 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.55□□□□□ -2.82
CCDC42Q96M95 MIR3149-201ENST00000584629 83 ntBASIC-2.55□□□□□ -2.82
CCDC42Q96M95 SNORD18B-201ENST00000365659 72 ntBASIC-2.56□□□□□ -2.82
CCDC42Q96M95 MIR601-201ENST00000385256 79 ntBASIC-2.56□□□□□ -2.82
CCDC42Q96M95 AC022028.1-201ENST00000412054 408 ntBASIC-2.56□□□□□ -2.82
CCDC42Q96M95 RNU6-508P-201ENST00000363231 103 ntBASIC-2.57□□□□□ -2.82
CCDC42Q96M95 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.57□□□□□ -2.82
CCDC42Q96M95 RNA5SP331-201ENST00000364986 107 ntBASIC-2.57□□□□□ -2.82
CCDC42Q96M95 MIR4520-1-201ENST00000582609 70 ntBASIC-2.57□□□□□ -2.82
CCDC42Q96M95 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.58□□□□□ -2.82
CCDC42Q96M95 MT-TI-201ENST00000387365 69 ntBASIC-2.58□□□□□ -2.82
CCDC42Q96M95 SNORA75.5-201ENST00000391291 81 ntBASIC-2.58□□□□□ -2.82
CCDC42Q96M95 AC107027.2-201ENST00000512197 115 ntBASIC-2.58□□□□□ -2.82
CCDC42Q96M95 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.58□□□□□ -2.82
CCDC42Q96M95 AC108081.1-201ENST00000604358 221 ntBASIC-2.58□□□□□ -2.82
CCDC42Q96M95 AC021753.1-201ENST00000635724 168 ntBASIC-2.58□□□□□ -2.82
CCDC42Q96M95 MIR365A-201ENST00000362260 87 ntBASIC-2.59□□□□□ -2.82
CCDC42Q96M95 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.59□□□□□ -2.82
CCDC42Q96M95 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.59□□□□□ -2.82
CCDC42Q96M95 RNU6-309P-201ENST00000364573 106 ntBASIC-2.59□□□□□ -2.82
CCDC42Q96M95 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.59□□□□□ -2.82
CCDC42Q96M95 SNORA63.2-201ENST00000362603 126 ntBASIC-2.6□□□□□ -2.83
CCDC42Q96M95 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.6□□□□□ -2.83
CCDC42Q96M95 RNU7-24P-201ENST00000458867 62 ntBASIC-2.6□□□□□ -2.83
CCDC42Q96M95 RNU6-65P-201ENST00000516332 98 ntBASIC-2.6□□□□□ -2.83
CCDC42Q96M95 RNU6-158P-201ENST00000517104 100 ntBASIC-2.6□□□□□ -2.83
CCDC42Q96M95 MIR4441-201ENST00000582623 100 ntBASIC-2.6□□□□□ -2.83
CCDC42Q96M95 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.61□□□□□ -2.83
CCDC42Q96M95 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.61□□□□□ -2.83
CCDC42Q96M95 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.61□□□□□ -2.83
CCDC42Q96M95 AC026407.1-201ENST00000518369 204 ntBASIC-2.61□□□□□ -2.83
CCDC42Q96M95 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.62□□□□□ -2.83
CCDC42Q96M95 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.62□□□□□ -2.83
CCDC42Q96M95 RNU2-51P-201ENST00000410708 197 ntBASIC-2.62□□□□□ -2.83
CCDC42Q96M95 RNY3P16-201ENST00000516338 101 ntBASIC-2.62□□□□□ -2.83
CCDC42Q96M95 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.62□□□□□ -2.83
CCDC42Q96M95 MIR4536-1-201ENST00000583537 88 ntBASIC-2.62□□□□□ -2.83
CCDC42Q96M95 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.63□□□□□ -2.83
CCDC42Q96M95 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.63□□□□□ -2.83
CCDC42Q96M95 RNU6-363P-201ENST00000362895 105 ntBASIC-2.64□□□□□ -2.83
CCDC42Q96M95 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.64□□□□□ -2.83
CCDC42Q96M95 MIR548A1-201ENST00000385041 97 ntBASIC-2.64□□□□□ -2.83
CCDC42Q96M95 SNORD75.2-201ENST00000408784 58 ntBASIC-2.64□□□□□ -2.83
CCDC42Q96M95 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.64□□□□□ -2.83
CCDC42Q96M95 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.64□□□□□ -2.83
CCDC42Q96M95 MIR335-201ENST00000362173 94 ntBASIC-2.65□□□□□ -2.83
CCDC42Q96M95 RNA5SP26-201ENST00000362406 119 ntBASIC-2.65□□□□□ -2.83
CCDC42Q96M95 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.65□□□□□ -2.83
CCDC42Q96M95 RNU6-493P-201ENST00000391321 108 ntBASIC-2.65□□□□□ -2.83
CCDC42Q96M95 MTND1P19-201ENST00000511780 315 ntBASIC-2.65□□□□□ -2.83
CCDC42Q96M95 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.66□□□□□ -2.84
CCDC42Q96M95 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.66□□□□□ -2.84
CCDC42Q96M95 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.66□□□□□ -2.84
CCDC42Q96M95 AL589823.1-201ENST00000429577 183 ntBASIC-2.66□□□□□ -2.84
CCDC42Q96M95 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.66□□□□□ -2.84
CCDC42Q96M95 MIR6502-201ENST00000617296 76 ntBASIC-2.66□□□□□ -2.84
CCDC42Q96M95 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.66□□□□□ -2.84
CCDC42Q96M95 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.67□□□□□ -2.84
CCDC42Q96M95 MIR1255B2-201ENST00000408618 67 ntBASIC-2.67□□□□□ -2.84
CCDC42Q96M95 AL353691.2-201ENST00000443795 59 ntBASIC-2.67□□□□□ -2.84
CCDC42Q96M95 AC091912.2-201ENST00000624798 167 ntBASIC-2.67□□□□□ -2.84
CCDC42Q96M95 MIR6844-201ENST00000637122 62 ntBASIC-2.67□□□□□ -2.84
CCDC42Q96M95 SNORD115-22-201ENST00000364456 82 ntBASIC-2.68□□□□□ -2.84
CCDC42Q96M95 RNU6-164P-201ENST00000364604 103 ntBASIC-2.68□□□□□ -2.84
CCDC42Q96M95 SNORA24B-201ENST00000384176 131 ntBASIC-2.68□□□□□ -2.84
CCDC42Q96M95 MIR759-201ENST00000390224 91 ntBASIC-2.68□□□□□ -2.84
CCDC42Q96M95 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.68□□□□□ -2.84
CCDC42Q96M95 MIR3140-201ENST00000583685 90 ntBASIC-2.68□□□□□ -2.84
CCDC42Q96M95 AL442128.1-201ENST00000615151 90 ntBASIC-2.68□□□□□ -2.84
CCDC42Q96M95 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.69□□□□□ -2.84
CCDC42Q96M95 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.69□□□□□ -2.84
CCDC42Q96M95 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.69□□□□□ -2.84
CCDC42Q96M95 MIR3646-201ENST00000578301 84 ntBASIC-2.69□□□□□ -2.84
CCDC42Q96M95 AC113195.1-201ENST00000579952 141 ntBASIC-2.69□□□□□ -2.84
CCDC42Q96M95 U6.106-201ENST00000636360 105 ntBASIC-2.69□□□□□ -2.84
CCDC42Q96M95 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.7□□□□□ -2.84
CCDC42Q96M95 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.7□□□□□ -2.84
CCDC42Q96M95 Z83846.1-201ENST00000446798 265 ntBASIC-2.7□□□□□ -2.84
CCDC42Q96M95 MIR4643-201ENST00000577473 78 ntBASIC-2.7□□□□□ -2.84
CCDC42Q96M95 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.71□□□□□ -2.84
CCDC42Q96M95 SNORD50.2-201ENST00000365465 70 ntBASIC-2.71□□□□□ -2.84
CCDC42Q96M95 RNU6-409P-201ENST00000384114 104 ntBASIC-2.71□□□□□ -2.84
CCDC42Q96M95 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.71□□□□□ -2.84
CCDC42Q96M95 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.71□□□□□ -2.84
CCDC42Q96M95 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.72□□□□□ -2.84
CCDC42Q96M95 SNORA33.1-201ENST00000364957 130 ntBASIC-2.72□□□□□ -2.84
CCDC42Q96M95 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.72□□□□□ -2.84
CCDC42Q96M95 MIR6874-201ENST00000635894 71 ntBASIC-2.72□□□□□ -2.84
CCDC42Q96M95 RNU6-132P-201ENST00000383863 107 ntBASIC-2.73□□□□□ -2.85
CCDC42Q96M95 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.73□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms