Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MIR4752-201ENST00000579672 72 ntBASIC0.47□□□□□ -2.33
LINC00479Q96M42 MTRNR2L2-201ENST00000604882 87 ntBASIC0.47□□□□□ -2.33
LINC00479Q96M42 RNU6-664P-201ENST00000362381 107 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 Y_RNA.207-201ENST00000364142 106 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 Y_RNA.220-201ENST00000364244 109 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 RNU4-45P-201ENST00000365469 141 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 RNU6-269P-201ENST00000391077 97 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 SNORD90-201ENST00000391145 111 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 RNU6-466P-201ENST00000391224 103 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC00479Q96M42 RNA5SP227-201ENST00000516184 113 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 RNU6-65P-201ENST00000516332 98 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 RNU7-13P-201ENST00000516413 62 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 RNU6-135P-201ENST00000516769 101 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 MIR5000-201ENST00000577717 103 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC00479Q96M42 AC092634.7-201ENST00000621022 103 ntBASIC0.46□□□□□ -2.34
LINC00479Q96M42 RNU4-32P-201ENST00000363404 141 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 RNU6-1126P-201ENST00000384002 107 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 SNORD41.1-201ENST00000391000 69 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 Y_RNA.596-201ENST00000410462 109 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 RNU6-402P-201ENST00000410678 103 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 RNU7-153P-201ENST00000516455 62 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.45□□□□□ -2.34
LINC00479Q96M42 MIR4668-201ENST00000582284 70 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 MIR6515-201ENST00000619843 57 ntBASIC0.45□□□□□ -2.34
LINC00479Q96M42 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
LINC00479Q96M42 Y_RNA.17-201ENST00000362433 111 ntBASIC0.44□□□□□ -2.34
LINC00479Q96M42 RNU6-1255P-201ENST00000363434 112 ntBASIC0.44□□□□□ -2.34
LINC00479Q96M42 RNU6-219P-201ENST00000364728 107 ntBASIC0.44□□□□□ -2.34
LINC00479Q96M42 Y_RNA.369-201ENST00000365568 117 ntBASIC0.44□□□□□ -2.34
LINC00479Q96M42 SNORD101-201ENST00000384027 73 ntBASIC0.44□□□□□ -2.34
LINC00479Q96M42 MIR3064-201ENST00000581130 66 ntBASIC0.44□□□□□ -2.34
LINC00479Q96M42 RNU6-294P-201ENST00000364999 102 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 MIR519E-201ENST00000385075 84 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
LINC00479Q96M42 MIR548L-201ENST00000408303 86 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 Y_RNA.593-201ENST00000410292 98 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 Y_RNA.620-201ENST00000411009 88 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 RNU6-1052P-201ENST00000411398 104 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 MIR2113-201ENST00000459007 91 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 RNU6-719P-201ENST00000516671 104 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.43□□□□□ -2.34
LINC00479Q96M42 SNORD116-22-201ENST00000384430 92 ntBASIC0.42□□□□□ -2.34
LINC00479Q96M42 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
LINC00479Q96M42 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
LINC00479Q96M42 RNU6-1232P-201ENST00000516299 86 ntBASIC0.42□□□□□ -2.34
LINC00479Q96M42 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
LINC00479Q96M42 RNU1-29P-201ENST00000606574 126 ntBASIC0.42□□□□□ -2.34
LINC00479Q96M42 AL162376.1-201ENST00000624117 175 ntBASIC0.42□□□□□ -2.34
LINC00479Q96M42 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 RNU6-1134P-201ENST00000365156 101 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
LINC00479Q96M42 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 SNORA40.8-201ENST00000411034 126 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 AC098934.3-201ENST00000430450 190 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 SNORA18.5-201ENST00000516616 101 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 MIR3140-201ENST00000583685 90 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 AC104996.3-201ENST00000590718 94 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 SNORA70.25-201ENST00000612741 95 ntBASIC0.41□□□□□ -2.34
LINC00479Q96M42 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.41□□□□□ -2.34
LINC00479Q96M42 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
LINC00479Q96M42 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 Y_RNA.73-201ENST00000362910 113 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 SNORD44.1-201ENST00000363202 61 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 RNU6-811P-201ENST00000384069 107 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
LINC00479Q96M42 RNA5SP484-201ENST00000458857 111 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 RNU6-762P-201ENST00000517107 102 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 MIR6755-201ENST00000619993 66 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
LINC00479Q96M42 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
LINC00479Q96M42 RNU6-633P-201ENST00000362612 103 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 Y_RNA.43-201ENST00000362670 111 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 Y_RNA.239-201ENST00000364444 113 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 RNU6-497P-201ENST00000365316 104 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 Y_RNA.491-201ENST00000384417 107 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 MIR617-201ENST00000385030 97 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 AC093423.1-201ENST00000440817 142 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 AC022709.1-201ENST00000615967 87 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.39□□□□□ -2.35
LINC00479Q96M42 RNU6-509P-201ENST00000363519 107 ntBASIC0.38□□□□□ -2.35
LINC00479Q96M42 RNU1-141P-201ENST00000364623 158 ntBASIC0.38□□□□□ -2.35
LINC00479Q96M42 SNORD115-44-201ENST00000365391 82 ntBASIC0.38□□□□□ -2.35
LINC00479Q96M42 Y_RNA.423-201ENST00000384057 113 ntBASIC0.38□□□□□ -2.35
LINC00479Q96M42 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
LINC00479Q96M42 RNU6-675P-201ENST00000384236 104 ntBASIC0.38□□□□□ -2.35
LINC00479Q96M42 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.38□□□□□ -2.35
LINC00479Q96M42 MIR548BB-201ENST00000626714 66 ntBASIC0.38□□□□□ -2.35
LINC00479Q96M42 MIR494-201ENST00000349529 81 ntBASIC0.37□□□□□ -2.35
LINC00479Q96M42 MIR451A-201ENST00000385059 72 ntBASIC0.37□□□□□ -2.35
LINC00479Q96M42 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms