Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 Y_RNA.348-201ENST00000365403 103 ntBASIC0.65□□□□□ -2.31
SNX27Q96L92 MIR488-201ENST00000365739 83 ntBASIC0.65□□□□□ -2.31
SNX27Q96L92 RNU6-905P-201ENST00000384434 107 ntBASIC0.65□□□□□ -2.31
SNX27Q96L92 MIR548G-201ENST00000408442 89 ntBASIC0.65□□□□□ -2.31
SNX27Q96L92 MIR4777-201ENST00000583710 86 ntBASIC0.65□□□□□ -2.31
SNX27Q96L92 RNU6-90P-201ENST00000606352 106 ntBASIC0.65□□□□□ -2.31
SNX27Q96L92 RNU7-10P-201ENST00000607194 63 ntBASIC0.65□□□□□ -2.31
SNX27Q96L92 RNU6-640P-201ENST00000363693 105 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 SNORD38.1-201ENST00000363863 68 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 RNU6-1163P-201ENST00000364516 107 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 SNORD45B-201ENST00000364617 72 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 SNORD38.2-201ENST00000384470 69 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 Y_RNA.567-201ENST00000384736 106 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 MIR635-201ENST00000384830 98 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 Y_RNA.601-201ENST00000410500 113 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 SNORA40.13-201ENST00000516379 120 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 RNU6-135P-201ENST00000516769 101 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 AC103810.7-201ENST00000607821 91 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.64□□□□□ -2.31
SNX27Q96L92 RNU6-1298P-201ENST00000362456 101 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 Y_RNA.95-201ENST00000363079 95 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 SNORD114-31-201ENST00000363219 75 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 Y_RNA.190-201ENST00000363964 101 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 RNU6-49P-201ENST00000384256 107 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 Y_RNA.544-201ENST00000384650 113 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 RNU6-1018P-201ENST00000516577 106 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 RNU6-850P-201ENST00000516934 103 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 RNA5SP170-201ENST00000517150 101 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 AC138869.1-201ENST00000568623 124 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 U7.3-201ENST00000616123 62 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 AC092634.7-201ENST00000621022 103 ntBASIC0.63□□□□□ -2.31
SNX27Q96L92 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SNX27Q96L92 Y_RNA.10-201ENST00000362371 110 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 Y_RNA.78-201ENST00000362970 110 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 RNU6-1229P-201ENST00000364295 107 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 MIR181B2-201ENST00000385004 89 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 MTATP8P2-201ENST00000435212 202 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 AL161932.1-201ENST00000437408 146 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 RPS29P8-201ENST00000445109 171 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 MIR5582-201ENST00000579697 68 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 AC025521.1-201ENST00000621624 286 ntBASIC0.62□□□□□ -2.31
SNX27Q96L92 Y_RNA.57-201ENST00000362806 113 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 RNA5SP517-201ENST00000364724 117 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 Y_RNA.290-201ENST00000364879 114 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 Y_RNA.342-201ENST00000365352 113 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 Y_RNA.377-201ENST00000365644 108 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 MIR516A2-201ENST00000384888 90 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 MIR516A1-201ENST00000385033 90 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.61□□□□□ -2.31
SNX27Q96L92 MALAT1.1-201ENST00000618249 95 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 Y_RNA.818-201ENST00000618813 71 ntBASIC0.61□□□□□ -2.31
SNX27Q96L92 Y_RNA.93-201ENST00000363066 109 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 SNORD49B-201ENST00000365172 72 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 RNU6-571P-201ENST00000384128 107 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 RNU6-813P-201ENST00000384691 107 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 RNU7-195P-201ENST00000458793 62 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 RNU7-106P-201ENST00000459514 67 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 TRAJ51-201ENST00000504127 63 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 MIR548AX-201ENST00000580117 73 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 MIR5190-201ENST00000581537 80 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 MIR4639-201ENST00000584938 69 ntBASIC0.6□□□□□ -2.31
SNX27Q96L92 RNU6-1255P-201ENST00000363434 112 ntBASIC0.59□□□□□ -2.31
SNX27Q96L92 RNU6-1244P-201ENST00000363614 108 ntBASIC0.59□□□□□ -2.31
SNX27Q96L92 Y_RNA.468-201ENST00000384298 102 ntBASIC0.59□□□□□ -2.31
SNX27Q96L92 Y_RNA.514-201ENST00000384528 112 ntBASIC0.59□□□□□ -2.31
SNX27Q96L92 SNORD28-201ENST00000384706 75 ntBASIC0.59□□□□□ -2.31
SNX27Q96L92 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
SNX27Q96L92 SNORD63B-201ENST00000411005 70 ntBASIC0.59□□□□□ -2.31
SNX27Q96L92 SNORA36.1-201ENST00000363424 132 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 Y_RNA.173-201ENST00000363776 113 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 AC244505.6-201ENST00000452829 130 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 Y_RNA.705-201ENST00000516862 110 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 RNA5SP47-201ENST00000517230 109 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 AL513043.2-201ENST00000573941 143 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 AC244669.1-204ENST00000621564 178 ntBASIC0.58□□□□□ -2.32
SNX27Q96L92 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
SNX27Q96L92 SNORD115-24-201ENST00000363528 82 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 Y_RNA.220-201ENST00000364244 109 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 Y_RNA.221-201ENST00000364248 96 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 RNU6-1134P-201ENST00000365156 101 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 SNORA8.2-201ENST00000384372 139 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 RNU6-887P-201ENST00000410660 100 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 Y_RNA.609-201ENST00000410669 89 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 SNORA40.8-201ENST00000411034 126 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 SCARNA16.5-201ENST00000517114 183 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 AC026421.1-201ENST00000519101 163 ntBASIC0.57□□□□□ -2.32
SNX27Q96L92 RNU6-294P-201ENST00000364999 102 ntBASIC0.56□□□□□ -2.32
SNX27Q96L92 RNU6-46P-201ENST00000383860 107 ntBASIC0.56□□□□□ -2.32
SNX27Q96L92 SNORD58A-201ENST00000383875 65 ntBASIC0.56□□□□□ -2.32
SNX27Q96L92 SNORD71-201ENST00000411292 86 ntBASIC0.56□□□□□ -2.32
SNX27Q96L92 RNA5SP268-201ENST00000516828 124 ntBASIC0.56□□□□□ -2.32
SNX27Q96L92 SNORA25.18-201ENST00000607153 114 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms