Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.42□□□□□ -2.02
MS4A3Q96HJ5 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
MS4A3Q96HJ5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MS4A3Q96HJ5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
MS4A3Q96HJ5 Z82195.2-201ENST00000612348 18351 ntBASIC2.41□□□□□ -2.02
MS4A3Q96HJ5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MS4A3Q96HJ5 AC062016.1-201ENST00000355719 319 ntBASIC2.41□□□□□ -2.02
MS4A3Q96HJ5 SNORD18A-201ENST00000363753 72 ntBASIC2.41□□□□□ -2.02
MS4A3Q96HJ5 RNU1-112P-201ENST00000364401 164 ntBASIC2.41□□□□□ -2.02
MS4A3Q96HJ5 MIR30A-201ENST00000385092 71 ntBASIC2.41□□□□□ -2.02
MS4A3Q96HJ5 AL591806.2-201ENST00000433122 173 ntBASIC2.41□□□□□ -2.02
MS4A3Q96HJ5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
MS4A3Q96HJ5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
MS4A3Q96HJ5 AL138827.1-201ENST00000402666 306 ntBASIC2.4□□□□□ -2.03
MS4A3Q96HJ5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.4□□□□□ -2.03
MS4A3Q96HJ5 RNU6-1206P-201ENST00000516339 103 ntBASIC2.4□□□□□ -2.03
MS4A3Q96HJ5 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
MS4A3Q96HJ5 AC243829.3-201ENST00000622177 108 ntBASIC2.4□□□□□ -2.03
MS4A3Q96HJ5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
MS4A3Q96HJ5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
MS4A3Q96HJ5 MIR516B1-201ENST00000385211 90 ntBASIC2.39□□□□□ -2.03
MS4A3Q96HJ5 MIR1255B2-201ENST00000408618 67 ntBASIC2.39□□□□□ -2.03
MS4A3Q96HJ5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
MS4A3Q96HJ5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
MS4A3Q96HJ5 Y_RNA.109-201ENST00000363215 102 ntBASIC2.38□□□□□ -2.03
MS4A3Q96HJ5 AC090617.8-201ENST00000623339 167 ntBASIC2.38□□□□□ -2.03
MS4A3Q96HJ5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MS4A3Q96HJ5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MS4A3Q96HJ5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 MIR26A1-201ENST00000362205 77 ntBASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 SNORA5B-201ENST00000363786 132 ntBASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 RNU6-1204P-201ENST00000363948 107 ntBASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 MIR23A-201ENST00000385245 73 ntBASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 SNORD79.1-201ENST00000516069 84 ntBASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 AL162376.1-201ENST00000624117 175 ntBASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.37□□□□□ -2.03
MS4A3Q96HJ5 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
MS4A3Q96HJ5 RNU6-910P-201ENST00000390844 107 ntBASIC2.36□□□□□ -2.03
MS4A3Q96HJ5 RNA5SP21-201ENST00000410917 96 ntBASIC2.36□□□□□ -2.03
MS4A3Q96HJ5 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
MS4A3Q96HJ5 AC012493.3-201ENST00000604494 112 ntBASIC2.36□□□□□ -2.03
MS4A3Q96HJ5 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
MS4A3Q96HJ5 RNA5SP356-201ENST00000515972 94 ntBASIC2.35□□□□□ -2.03
MS4A3Q96HJ5 RNU7-154P-201ENST00000516194 62 ntBASIC2.35□□□□□ -2.03
MS4A3Q96HJ5 MIR4319-201ENST00000577285 85 ntBASIC2.35□□□□□ -2.03
MS4A3Q96HJ5 MIR548AE1-201ENST00000583292 70 ntBASIC2.35□□□□□ -2.03
MS4A3Q96HJ5 AC243829.6-201ENST00000612652 106 ntBASIC2.35□□□□□ -2.03
MS4A3Q96HJ5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MS4A3Q96HJ5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
MS4A3Q96HJ5 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
MS4A3Q96HJ5 MIR221-201ENST00000385135 110 ntBASIC2.34□□□□□ -2.03
MS4A3Q96HJ5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MS4A3Q96HJ5 SNORD109B-201ENST00000458961 67 ntBASIC2.34□□□□□ -2.03
MS4A3Q96HJ5 SNORD109A-201ENST00000459128 67 ntBASIC2.34□□□□□ -2.03
MS4A3Q96HJ5 SCARNA16.5-201ENST00000517114 183 ntBASIC2.34□□□□□ -2.03
MS4A3Q96HJ5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.34□□□□□ -2.03
MS4A3Q96HJ5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.33□□□□□ -2.04
MS4A3Q96HJ5 Y_RNA.500-201ENST00000384466 111 ntBASIC2.33□□□□□ -2.04
MS4A3Q96HJ5 MIR5194-201ENST00000582634 120 ntBASIC2.33□□□□□ -2.04
MS4A3Q96HJ5 MIR4781-201ENST00000585250 76 ntBASIC2.33□□□□□ -2.04
MS4A3Q96HJ5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
MS4A3Q96HJ5 MIR6073-201ENST00000352083 89 ntBASIC2.32□□□□□ -2.04
MS4A3Q96HJ5 RNU6-822P-201ENST00000362707 106 ntBASIC2.32□□□□□ -2.04
MS4A3Q96HJ5 Y_RNA.69-201ENST00000362885 109 ntBASIC2.32□□□□□ -2.04
MS4A3Q96HJ5 MIR9-1-201ENST00000385198 89 ntBASIC2.32□□□□□ -2.04
MS4A3Q96HJ5 SUMO1P4-201ENST00000429430 302 ntBASIC2.32□□□□□ -2.04
MS4A3Q96HJ5 MIR4299-201ENST00000577899 72 ntBASIC2.32□□□□□ -2.04
MS4A3Q96HJ5 RNU6-859P-201ENST00000362728 107 ntBASIC2.31□□□□□ -2.04
MS4A3Q96HJ5 RNA5SP210-201ENST00000391034 120 ntBASIC2.31□□□□□ -2.04
MS4A3Q96HJ5 AC098934.3-201ENST00000430450 190 ntBASIC2.31□□□□□ -2.04
MS4A3Q96HJ5 MIR548AG1-201ENST00000579932 66 ntBASIC2.31□□□□□ -2.04
MS4A3Q96HJ5 MIR4473-201ENST00000583731 91 ntBASIC2.31□□□□□ -2.04
MS4A3Q96HJ5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MS4A3Q96HJ5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
MS4A3Q96HJ5 RNU6-458P-201ENST00000384179 107 ntBASIC2.3□□□□□ -2.04
MS4A3Q96HJ5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.3□□□□□ -2.04
MS4A3Q96HJ5 U6.58-201ENST00000613107 107 ntBASIC2.3□□□□□ -2.04
MS4A3Q96HJ5 MIR196B-201ENST00000384852 84 ntBASIC2.29□□□□□ -2.04
MS4A3Q96HJ5 MIR634-201ENST00000385208 97 ntBASIC2.29□□□□□ -2.04
MS4A3Q96HJ5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.29□□□□□ -2.04
MS4A3Q96HJ5 RNA5SP184-201ENST00000411071 108 ntBASIC2.29□□□□□ -2.04
MS4A3Q96HJ5 RNA5SP82-201ENST00000516707 92 ntBASIC2.29□□□□□ -2.04
MS4A3Q96HJ5 RNU1-92P-201ENST00000517017 135 ntBASIC2.29□□□□□ -2.04
MS4A3Q96HJ5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
MS4A3Q96HJ5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MS4A3Q96HJ5 MIR579-201ENST00000385221 98 ntBASIC2.28□□□□□ -2.04
MS4A3Q96HJ5 AC006210.1-201ENST00000424882 111 ntBASIC2.28□□□□□ -2.04
MS4A3Q96HJ5 AL451105.1-201ENST00000450005 189 ntBASIC2.28□□□□□ -2.04
MS4A3Q96HJ5 U7.7-201ENST00000459276 60 ntBASIC2.28□□□□□ -2.04
MS4A3Q96HJ5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MS4A3Q96HJ5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
MS4A3Q96HJ5 RNA5SP432-201ENST00000362480 116 ntBASIC2.27□□□□□ -2.05
MS4A3Q96HJ5 MIR329-2-201ENST00000385029 84 ntBASIC2.27□□□□□ -2.05
MS4A3Q96HJ5 RNU6-894P-201ENST00000517094 105 ntBASIC2.27□□□□□ -2.05
MS4A3Q96HJ5 RNU7-151P-201ENST00000516930 53 ntBASIC2.26□□□□□ -2.05
MS4A3Q96HJ5 MIR3678-201ENST00000578455 94 ntBASIC2.26□□□□□ -2.05
MS4A3Q96HJ5 SNORD115-25-201ENST00000362619 82 ntBASIC2.25□□□□□ -2.05
MS4A3Q96HJ5 RNU6-742P-201ENST00000365289 107 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 348.4 ms