Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.03□□□□□ -2.57
ECHDC3Q96DC8 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.03□□□□□ -2.57
ECHDC3Q96DC8 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.03□□□□□ -2.57
ECHDC3Q96DC8 MIR3658-201ENST00000636291 56 ntBASIC-1.03□□□□□ -2.57
ECHDC3Q96DC8 MIR1255B1-201ENST00000636325 63 ntBASIC-1.03□□□□□ -2.57
ECHDC3Q96DC8 SNORD115-25-201ENST00000362619 82 ntBASIC-1.04□□□□□ -2.58
ECHDC3Q96DC8 RNU6-867P-201ENST00000364956 107 ntBASIC-1.04□□□□□ -2.58
ECHDC3Q96DC8 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.04□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.04□□□□□ -2.58
ECHDC3Q96DC8 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 SNORD114-3-201ENST00000364969 75 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 RNU6-901P-201ENST00000384593 106 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 MIR204-201ENST00000385200 110 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 SNORA40.17-201ENST00000517256 115 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 MIR4696-201ENST00000581431 70 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.05□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.06□□□□□ -2.58
ECHDC3Q96DC8 MIR548G-201ENST00000408442 89 ntBASIC-1.06□□□□□ -2.58
ECHDC3Q96DC8 SNORA13-201ENST00000458790 133 ntBASIC-1.06□□□□□ -2.58
ECHDC3Q96DC8 AC021146.6-201ENST00000514659 117 ntBASIC-1.06□□□□□ -2.58
ECHDC3Q96DC8 MIR3121-201ENST00000579680 77 ntBASIC-1.06□□□□□ -2.58
ECHDC3Q96DC8 RNU6-90P-201ENST00000606352 106 ntBASIC-1.06□□□□□ -2.58
ECHDC3Q96DC8 AC021753.1-201ENST00000635724 168 ntBASIC-1.06□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.07□□□□□ -2.58
ECHDC3Q96DC8 SNORD101-201ENST00000384027 73 ntBASIC-1.07□□□□□ -2.58
ECHDC3Q96DC8 snoU13.13-201ENST00000458842 104 ntBASIC-1.07□□□□□ -2.58
ECHDC3Q96DC8 RNU6-664P-201ENST00000362381 107 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 SNORD114-25-201ENST00000363742 72 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 SNORD38.1-201ENST00000363863 68 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 MIR1207-201ENST00000408249 87 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 AL353813.1-201ENST00000440700 253 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 SNORD2-201ENST00000459163 69 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 AL117351.2-201ENST00000513571 157 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.08□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 RNU4-36P-201ENST00000364294 144 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 SNORD37.2-201ENST00000391075 66 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 SNORD38.3-201ENST00000516599 73 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 RNU6-881P-201ENST00000516813 102 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 RNU6-706P-201ENST00000517229 104 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 AC026421.1-201ENST00000519101 163 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 AC130289.1-201ENST00000577321 73 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 MIR1246-201ENST00000636535 73 ntBASIC-1.09□□□□□ -2.58
ECHDC3Q96DC8 RNU6-363P-201ENST00000362895 105 ntBASIC-1.1□□□□□ -2.59
ECHDC3Q96DC8 RNU6-797P-201ENST00000363101 109 ntBASIC-1.1□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.1□□□□□ -2.59
ECHDC3Q96DC8 SNORA7.5-201ENST00000410672 110 ntBASIC-1.1□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.1□□□□□ -2.59
ECHDC3Q96DC8 RNU6-111P-201ENST00000517179 105 ntBASIC-1.1□□□□□ -2.59
ECHDC3Q96DC8 MIR3128-201ENST00000581957 66 ntBASIC-1.1□□□□□ -2.59
ECHDC3Q96DC8 RNY4P27-201ENST00000363341 96 ntBASIC-1.11□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.11□□□□□ -2.59
ECHDC3Q96DC8 RNU6-973P-201ENST00000364690 107 ntBASIC-1.11□□□□□ -2.59
ECHDC3Q96DC8 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.11□□□□□ -2.59
ECHDC3Q96DC8 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.11□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.11□□□□□ -2.59
ECHDC3Q96DC8 RNU6-86P-201ENST00000606534 107 ntBASIC-1.11□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 MIR582-201ENST00000365731 98 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 RNU6-466P-201ENST00000391224 103 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 MIR548E-201ENST00000408287 88 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 RNU6-935P-201ENST00000410371 100 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 RNU7-197P-201ENST00000458836 62 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 AP002392.1-201ENST00000537692 208 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 AP001094.1-201ENST00000579805 193 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 AL512310.12-203ENST00000640543 90 ntBASIC-1.12□□□□□ -2.59
ECHDC3Q96DC8 RNU6-502P-201ENST00000362419 108 ntBASIC-1.13□□□□□ -2.59
ECHDC3Q96DC8 RNY4P6-201ENST00000363667 96 ntBASIC-1.13□□□□□ -2.59
ECHDC3Q96DC8 RNU6-226P-201ENST00000363778 107 ntBASIC-1.13□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.13□□□□□ -2.59
ECHDC3Q96DC8 SCARNA18B-201ENST00000458806 135 ntBASIC-1.13□□□□□ -2.59
ECHDC3Q96DC8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.13□□□□□ -2.59
ECHDC3Q96DC8 AC008737.2-201ENST00000599446 118 ntBASIC-1.13□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.14□□□□□ -2.59
ECHDC3Q96DC8 MIR606-201ENST00000384851 96 ntBASIC-1.14□□□□□ -2.59
ECHDC3Q96DC8 MIR548D2-201ENST00000384955 97 ntBASIC-1.14□□□□□ -2.59
ECHDC3Q96DC8 AC021146.9-201ENST00000512503 156 ntBASIC-1.14□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.14□□□□□ -2.59
ECHDC3Q96DC8 AC022559.1-201ENST00000520905 205 ntBASIC-1.14□□□□□ -2.59
ECHDC3Q96DC8 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.15□□□□□ -2.59
ECHDC3Q96DC8 RNU6-476P-201ENST00000384726 107 ntBASIC-1.15□□□□□ -2.59
ECHDC3Q96DC8 U3.27-201ENST00000391237 200 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms