Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU4-45P-201ENST00000365469 141 ntBASIC1.12□□□□□ -2.23
BRF1Q92994 SNORD99-201ENST00000408612 74 ntBASIC1.12□□□□□ -2.23
BRF1Q92994 AC244098.3-201ENST00000424803 96 ntBASIC1.12□□□□□ -2.23
BRF1Q92994 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.12□□□□□ -2.23
BRF1Q92994 MIR3678-201ENST00000578455 94 ntBASIC1.12□□□□□ -2.23
BRF1Q92994 MIR3920-201ENST00000581751 86 ntBASIC1.12□□□□□ -2.23
BRF1Q92994 SNORA63.2-201ENST00000362603 126 ntBASIC1.11□□□□□ -2.23
BRF1Q92994 RNU6-129P-201ENST00000391022 107 ntBASIC1.11□□□□□ -2.23
BRF1Q92994 FGF7P7-201ENST00000514120 227 ntBASIC1.11□□□□□ -2.23
BRF1Q92994 RNU6-1053P-201ENST00000515930 101 ntBASIC1.11□□□□□ -2.23
BRF1Q92994 RNU6-287P-201ENST00000516230 98 ntBASIC1.11□□□□□ -2.23
BRF1Q92994 RNA5SP47-201ENST00000517230 109 ntBASIC1.11□□□□□ -2.23
BRF1Q92994 AC244669.1-204ENST00000621564 178 ntBASIC1.11□□□□□ -2.23
BRF1Q92994 RNU6-315P-201ENST00000362666 107 ntBASIC1.1□□□□□ -2.23
BRF1Q92994 SNORD114-27-201ENST00000363766 70 ntBASIC1.1□□□□□ -2.23
BRF1Q92994 Y_RNA.660-201ENST00000516002 120 ntBASIC1.1□□□□□ -2.23
BRF1Q92994 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.1□□□□□ -2.23
BRF1Q92994 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.1□□□□□ -2.23
BRF1Q92994 AC067863.3-201ENST00000624172 122 ntBASIC1.1□□□□□ -2.23
BRF1Q92994 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
BRF1Q92994 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
BRF1Q92994 RNU6-1229P-201ENST00000364295 107 ntBASIC1.09□□□□□ -2.23
BRF1Q92994 RNY4P3-201ENST00000365254 95 ntBASIC1.09□□□□□ -2.23
BRF1Q92994 RNU6-1051P-201ENST00000365471 102 ntBASIC1.09□□□□□ -2.23
BRF1Q92994 RNU7-104P-201ENST00000459398 79 ntBASIC1.09□□□□□ -2.23
BRF1Q92994 RNU6-638P-201ENST00000516582 104 ntBASIC1.09□□□□□ -2.23
BRF1Q92994 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.09□□□□□ -2.23
BRF1Q92994 AC011195.1-201ENST00000578177 177 ntBASIC1.09□□□□□ -2.23
BRF1Q92994 AL353765.1-201ENST00000605514 183 ntBASIC1.09□□□□□ -2.23
BRF1Q92994 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.09□□□□□ -2.23
BRF1Q92994 MIR18A-201ENST00000362310 71 ntBASIC1.08□□□□□ -2.24
BRF1Q92994 Y_RNA.94-201ENST00000363068 106 ntBASIC1.08□□□□□ -2.24
BRF1Q92994 RNU6-1126P-201ENST00000384002 107 ntBASIC1.08□□□□□ -2.24
BRF1Q92994 MIR4712-201ENST00000583750 82 ntBASIC1.08□□□□□ -2.24
BRF1Q92994 RNU6-478P-201ENST00000363904 110 ntBASIC1.07□□□□□ -2.24
BRF1Q92994 SNORD41.1-201ENST00000391000 69 ntBASIC1.07□□□□□ -2.24
BRF1Q92994 SNORD90-201ENST00000391145 111 ntBASIC1.07□□□□□ -2.24
BRF1Q92994 U3.27-201ENST00000391237 200 ntBASIC1.07□□□□□ -2.24
BRF1Q92994 RNA5SP225-201ENST00000410874 135 ntBASIC1.07□□□□□ -2.24
BRF1Q92994 AL450471.1-201ENST00000447509 127 ntBASIC1.07□□□□□ -2.24
BRF1Q92994 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
BRF1Q92994 Y_RNA.264-201ENST00000364665 102 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 SNORA25.9-201ENST00000365087 128 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 MIR617-201ENST00000385030 97 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 MIR2113-201ENST00000459007 91 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 Y_RNA.676-201ENST00000516393 96 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 RNU6-1057P-201ENST00000517162 102 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 MIR548AG2-201ENST00000581228 64 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 MIR6828-201ENST00000636181 60 ntBASIC1.06□□□□□ -2.24
BRF1Q92994 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 RNU6-686P-201ENST00000364839 107 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 RNU6-24P-201ENST00000384440 107 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 MIR451A-201ENST00000385059 72 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 SNORD77.2-201ENST00000391045 68 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 RNU6-857P-201ENST00000515893 110 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 SCARNA16.5-201ENST00000517114 183 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
BRF1Q92994 RNU6-726P-201ENST00000364680 107 ntBASIC1.04□□□□□ -2.24
BRF1Q92994 MIRLET7A1-201ENST00000362295 80 ntBASIC1.03□□□□□ -2.24
BRF1Q92994 RNU5F-1-201ENST00000362507 117 ntBASIC1.03□□□□□ -2.24
BRF1Q92994 MIR216B-201ENST00000390186 82 ntBASIC1.03□□□□□ -2.24
BRF1Q92994 RNU7-74P-201ENST00000459104 62 ntBASIC1.03□□□□□ -2.24
BRF1Q92994 MIR3973-201ENST00000579824 107 ntBASIC1.03□□□□□ -2.24
BRF1Q92994 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.02□□□□□ -2.25
BRF1Q92994 MIR96-201ENST00000362288 78 ntBASIC1.02□□□□□ -2.25
BRF1Q92994 RNU6-208P-201ENST00000362431 107 ntBASIC1.02□□□□□ -2.25
BRF1Q92994 RNU6-161P-201ENST00000363051 106 ntBASIC1.02□□□□□ -2.25
BRF1Q92994 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
BRF1Q92994 snoU13.17-201ENST00000458802 104 ntBASIC1.02□□□□□ -2.25
BRF1Q92994 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
BRF1Q92994 MIR3140-201ENST00000583685 90 ntBASIC1.02□□□□□ -2.25
BRF1Q92994 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.02□□□□□ -2.25
BRF1Q92994 SNORA24B-201ENST00000384176 131 ntBASIC1.01□□□□□ -2.25
BRF1Q92994 MIR519E-201ENST00000385075 84 ntBASIC1.01□□□□□ -2.25
BRF1Q92994 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.01□□□□□ -2.25
BRF1Q92994 Y_RNA.164-201ENST00000363709 102 ntBASIC1□□□□□ -2.25
BRF1Q92994 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
BRF1Q92994 RNU6-1108P-201ENST00000516308 104 ntBASIC1□□□□□ -2.25
BRF1Q92994 RNA5SP102-201ENST00000516865 106 ntBASIC1□□□□□ -2.25
BRF1Q92994 IST1-227ENST00000626438 126 ntTSL 5 BASIC1□□□□□ -2.25
BRF1Q92994 MIR373-201ENST00000362273 69 ntBASIC0.99□□□□□ -2.25
BRF1Q92994 RNU6-1094P-201ENST00000362416 104 ntBASIC0.99□□□□□ -2.25
BRF1Q92994 RNU6-380P-201ENST00000410207 107 ntBASIC0.99□□□□□ -2.25
BRF1Q92994 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.99□□□□□ -2.25
BRF1Q92994 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
BRF1Q92994 RNA5SP94-201ENST00000516917 108 ntBASIC0.99□□□□□ -2.25
BRF1Q92994 SNORA36.1-201ENST00000363424 132 ntBASIC0.98□□□□□ -2.25
BRF1Q92994 MIR548L-201ENST00000408303 86 ntBASIC0.98□□□□□ -2.25
BRF1Q92994 RNA5SP222-201ENST00000411039 105 ntBASIC0.98□□□□□ -2.25
BRF1Q92994 SNORD114-2-201ENST00000363953 78 ntBASIC0.97□□□□□ -2.25
BRF1Q92994 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
BRF1Q92994 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.97□□□□□ -2.25
BRF1Q92994 RNU2-59P-201ENST00000410482 191 ntBASIC0.97□□□□□ -2.25
BRF1Q92994 AC093423.1-201ENST00000440817 142 ntBASIC0.97□□□□□ -2.25
BRF1Q92994 AC097510.1-201ENST00000510945 133 ntBASIC0.97□□□□□ -2.25
BRF1Q92994 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
BRF1Q92994 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.25
BRF1Q92994 RNU6-716P-201ENST00000365621 103 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms