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Protein–RNA interactions for Protein: Q92854
SEMA4D, Semaphorin-4D, human
Predictions only
Length
862 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SEMA4D
Q92854
AL513043.2-201
ENST00000573941
143 nt
BASIC
0.31
□□□□□ -2.36
SEMA4D
Q92854
MIR450A1-201
ENST00000362262
91 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
RNU6-755P-201
ENST00000364400
103 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
VTRNA1-3-201
ENST00000365645
89 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
AL035461.1-201
ENST00000421490
332 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
AL357793.1-201
ENST00000448412
401 nt
TSL 5
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
AL031737.1-201
ENST00000450125
223 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
SNORA62.5-201
ENST00000516634
120 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
RNU4ATAC9P-201
ENST00000517146
126 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
MIR4752-201
ENST00000579672
72 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
RNU1-29P-201
ENST00000606574
126 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
MIR6755-201
ENST00000619993
66 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
MIR924-201
ENST00000638017
53 nt
BASIC
0.3
□□□□□ -2.36
SEMA4D
Q92854
CEP290-203
ENST00000547691
5968 nt
TSL 1 (best)
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
SNORA63.4-201
ENST00000362763
126 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
Y_RNA.205-201
ENST00000364128
113 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
RNU6-269P-201
ENST00000391077
97 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
RNU6-466P-201
ENST00000391224
103 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
Y_RNA.648-201
ENST00000459455
110 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
RNA5SP134-201
ENST00000516492
96 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
ZNRD1-AS1_1.6-201
ENST00000610339
68 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
Y_RNA.818-201
ENST00000618813
71 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
U6.100-201
ENST00000636230
99 nt
BASIC
0.29
□□□□□ -2.36
SEMA4D
Q92854
Y_RNA.283-201
ENST00000364798
112 nt
BASIC
0.28
□□□□□ -2.36
SEMA4D
Q92854
Y_RNA.423-201
ENST00000384057
113 nt
BASIC
0.28
□□□□□ -2.36
SEMA4D
Q92854
Y_RNA.540-201
ENST00000384638
111 nt
BASIC
0.28
□□□□□ -2.36
SEMA4D
Q92854
RNU6-644P-201
ENST00000391155
98 nt
BASIC
0.28
□□□□□ -2.36
SEMA4D
Q92854
Y_RNA.705-201
ENST00000516862
110 nt
BASIC
0.28
□□□□□ -2.36
SEMA4D
Q92854
MIR548AG2-201
ENST00000581228
64 nt
BASIC
0.28
□□□□□ -2.36
SEMA4D
Q92854
MIR6779-201
ENST00000617283
64 nt
BASIC
0.28
□□□□□ -2.36
SEMA4D
Q92854
Y_RNA.93-201
ENST00000363066
109 nt
BASIC
0.27
□□□□□ -2.37
SEMA4D
Q92854
Y_RNA.107-201
ENST00000363190
121 nt
BASIC
0.27
□□□□□ -2.37
SEMA4D
Q92854
SNORD115-44-201
ENST00000365391
82 nt
BASIC
0.27
□□□□□ -2.37
SEMA4D
Q92854
RNU6-44P-201
ENST00000384045
107 nt
BASIC
0.27
□□□□□ -2.37
SEMA4D
Q92854
Y_RNA.596-201
ENST00000410462
109 nt
BASIC
0.27
□□□□□ -2.37
SEMA4D
Q92854
RNA5SP62-201
ENST00000363457
110 nt
BASIC
0.26
□□□□□ -2.37
SEMA4D
Q92854
Y_RNA.544-201
ENST00000384650
113 nt
BASIC
0.26
□□□□□ -2.37
SEMA4D
Q92854
RNU6-972P-201
ENST00000391208
107 nt
BASIC
0.26
□□□□□ -2.37
SEMA4D
Q92854
RNU6-887P-201
ENST00000410660
100 nt
BASIC
0.26
□□□□□ -2.37
SEMA4D
Q92854
RNU7-61P-201
ENST00000515897
61 nt
BASIC
0.26
□□□□□ -2.37
SEMA4D
Q92854
RNU6-287P-201
ENST00000516230
98 nt
BASIC
0.26
□□□□□ -2.37
SEMA4D
Q92854
MTRNR2L2-201
ENST00000604882
87 nt
BASIC
0.26
□□□□□ -2.37
SEMA4D
Q92854
ST7-OT3_3.1-201
ENST00000611709
115 nt
BASIC
0.26
□□□□□ -2.37
SEMA4D
Q92854
Y_RNA.96-201
ENST00000363092
109 nt
BASIC
0.25
□□□□□ -2.37
SEMA4D
Q92854
SNORD58A-201
ENST00000383875
65 nt
BASIC
0.25
□□□□□ -2.37
SEMA4D
Q92854
MIR2113-201
ENST00000459007
91 nt
BASIC
0.25
□□□□□ -2.37
SEMA4D
Q92854
RNU6-75P-201
ENST00000515944
104 nt
BASIC
0.25
□□□□□ -2.37
SEMA4D
Q92854
AC069113.3-201
ENST00000521019
150 nt
BASIC
0.25
□□□□□ -2.37
SEMA4D
Q92854
SNORA70.25-201
ENST00000612741
95 nt
BASIC
0.25
□□□□□ -2.37
SEMA4D
Q92854
RNU6-509P-201
ENST00000363519
107 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
Y_RNA.207-201
ENST00000364142
106 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
RNU6-815P-201
ENST00000384080
113 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
MIR617-201
ENST00000385030
97 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
MIR519E-201
ENST00000385075
84 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
AC073261.1-201
ENST00000429409
121 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
RNU7-85P-201
ENST00000458851
63 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
RNU7-74P-201
ENST00000459104
62 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
MIR4536-1-201
ENST00000583537
88 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
AC073869.9-201
ENST00000641610
120 nt
BASIC
0.24
□□□□□ -2.37
SEMA4D
Q92854
RNU6-664P-201
ENST00000362381
107 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
SNORA2A-201
ENST00000383885
135 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
RNU6-147P-201
ENST00000383983
107 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
SNORD101-201
ENST00000384027
73 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
MTATP8P2-201
ENST00000435212
202 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
RNA5SP484-201
ENST00000458857
111 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
RNU6-1232P-201
ENST00000516299
86 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
RNU6-65P-201
ENST00000516332
98 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
MIR5706-201
ENST00000579841
80 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
MIR4696-201
ENST00000581431
70 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
MIR8087-201
ENST00000612745
78 nt
BASIC
0.23
□□□□□ -2.37
SEMA4D
Q92854
RNU1-141P-201
ENST00000364623
158 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
MIR760-201
ENST00000390220
80 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
RNU6-162P-201
ENST00000516228
103 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
RNU6-158P-201
ENST00000517104
100 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
NAMPTP3-201
ENST00000569273
224 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
MIR5093-201
ENST00000583199
100 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
Evf-2_5p.1-201
ENST00000614213
142 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
U7.3-201
ENST00000616123
62 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
AP001318.4-201
ENST00000616637
121 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
MIR4315-1-201
ENST00000636800
73 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
MIR4315-2-201
ENST00000640925
73 nt
BASIC
0.22
□□□□□ -2.37
SEMA4D
Q92854
MIR330-201
ENST00000362196
94 nt
BASIC
0.21
□□□□□ -2.38
SEMA4D
Q92854
RNU6-519P-201
ENST00000410590
108 nt
BASIC
0.21
□□□□□ -2.38
SEMA4D
Q92854
SNORD4B-201
ENST00000459083
72 nt
BASIC
0.21
□□□□□ -2.38
SEMA4D
Q92854
SNORD116-10-201
ENST00000363791
102 nt
BASIC
0.2
□□□□□ -2.38
SEMA4D
Q92854
RNA5SP128-201
ENST00000365305
116 nt
BASIC
0.2
□□□□□ -2.38
SEMA4D
Q92854
RNU6ATAC4P-201
ENST00000387446
126 nt
BASIC
0.2
□□□□□ -2.38
SEMA4D
Q92854
SNORD110-201
ENST00000408189
75 nt
BASIC
0.2
□□□□□ -2.38
SEMA4D
Q92854
AC006210.1-201
ENST00000424882
111 nt
BASIC
0.2
□□□□□ -2.38
SEMA4D
Q92854
AC093423.1-201
ENST00000440817
142 nt
BASIC
0.2
□□□□□ -2.38
SEMA4D
Q92854
RNU7-129P-201
ENST00000516128
62 nt
BASIC
0.2
□□□□□ -2.38
SEMA4D
Q92854
HOTAIR_3.1-201
ENST00000611352
97 nt
BASIC
0.2
□□□□□ -2.38
SEMA4D
Q92854
MIRLET7F1-201
ENST00000362202
87 nt
BASIC
0.19
□□□□□ -2.38
SEMA4D
Q92854
SNORA9.1-201
ENST00000362412
131 nt
BASIC
0.19
□□□□□ -2.38
SEMA4D
Q92854
Y_RNA.190-201
ENST00000363964
101 nt
BASIC
0.19
□□□□□ -2.38
SEMA4D
Q92854
RNU6-32P-201
ENST00000383948
107 nt
BASIC
0.19
□□□□□ -2.38
SEMA4D
Q92854
RNU6-13P-201
ENST00000384248
107 nt
BASIC
0.19
□□□□□ -2.38
SEMA4D
Q92854
Y_RNA.495-201
ENST00000384435
112 nt
BASIC
0.19
□□□□□ -2.38
SEMA4D
Q92854
RNU6-12P-201
ENST00000384604
107 nt
BASIC
0.19
□□□□□ -2.38
SEMA4D
Q92854
RNU6-41P-201
ENST00000384741
107 nt
BASIC
0.19
□□□□□ -2.38
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