Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 MIR151B-201ENST00000584249 96 ntBASIC1.56□□□□□ -2.16
DDX54Q8TDD1 MIR4295-201ENST00000585286 85 ntBASIC1.56□□□□□ -2.16
DDX54Q8TDD1 Y_RNA.239-201ENST00000364444 113 ntBASIC1.55□□□□□ -2.16
DDX54Q8TDD1 AC087343.1-201ENST00000477341 475 ntBASIC1.55□□□□□ -2.16
DDX54Q8TDD1 RNU6-557P-201ENST00000516842 110 ntBASIC1.55□□□□□ -2.16
DDX54Q8TDD1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
DDX54Q8TDD1 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
DDX54Q8TDD1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.55□□□□□ -2.16
DDX54Q8TDD1 RNU6-1094P-201ENST00000362416 104 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 RNU6-1051P-201ENST00000365471 102 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 MIR520H-201ENST00000385126 88 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 SNORD89-201ENST00000390981 114 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 AC067940.1-201ENST00000458411 300 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 FGF7P7-201ENST00000514120 227 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 RNU6-719P-201ENST00000516671 104 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 AC145423.2-201ENST00000610631 239 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 uc_338.16-201ENST00000621804 95 ntBASIC1.54□□□□□ -2.16
DDX54Q8TDD1 Y_RNA.565-201ENST00000384719 101 ntBASIC1.53□□□□□ -2.16
DDX54Q8TDD1 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
DDX54Q8TDD1 SNORD77.2-201ENST00000391045 68 ntBASIC1.53□□□□□ -2.16
DDX54Q8TDD1 RNA5SP436-201ENST00000516020 115 ntBASIC1.53□□□□□ -2.16
DDX54Q8TDD1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.53□□□□□ -2.16
DDX54Q8TDD1 RNU6-208P-201ENST00000362431 107 ntBASIC1.52□□□□□ -2.17
DDX54Q8TDD1 MIR598-201ENST00000384868 97 ntBASIC1.52□□□□□ -2.17
DDX54Q8TDD1 Y_RNA.596-201ENST00000410462 109 ntBASIC1.52□□□□□ -2.17
DDX54Q8TDD1 AC244505.6-201ENST00000452829 130 ntBASIC1.52□□□□□ -2.17
DDX54Q8TDD1 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.52□□□□□ -2.17
DDX54Q8TDD1 Y_RNA.207-201ENST00000364142 106 ntBASIC1.51□□□□□ -2.17
DDX54Q8TDD1 SNORD12-201ENST00000391002 90 ntBASIC1.51□□□□□ -2.17
DDX54Q8TDD1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.51□□□□□ -2.17
DDX54Q8TDD1 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
DDX54Q8TDD1 MTRNR2L2-201ENST00000604882 87 ntBASIC1.51□□□□□ -2.17
DDX54Q8TDD1 U7.4-201ENST00000614961 63 ntBASIC1.51□□□□□ -2.17
DDX54Q8TDD1 SNORD115-24-201ENST00000363528 82 ntBASIC1.5□□□□□ -2.17
DDX54Q8TDD1 AL136317.1-201ENST00000612653 226 ntBASIC1.5□□□□□ -2.17
DDX54Q8TDD1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
DDX54Q8TDD1 MIR644A-201ENST00000385262 94 ntBASIC1.49□□□□□ -2.17
DDX54Q8TDD1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
DDX54Q8TDD1 SNORD124-201ENST00000459577 104 ntBASIC1.49□□□□□ -2.17
DDX54Q8TDD1 MIR3134-201ENST00000579433 74 ntBASIC1.49□□□□□ -2.17
DDX54Q8TDD1 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.49□□□□□ -2.17
DDX54Q8TDD1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.48□□□□□ -2.17
DDX54Q8TDD1 RNU6-287P-201ENST00000516230 98 ntBASIC1.48□□□□□ -2.17
DDX54Q8TDD1 MIR664A-201ENST00000626086 82 ntBASIC1.48□□□□□ -2.17
DDX54Q8TDD1 Y_RNA.12-201ENST00000362393 112 ntBASIC1.47□□□□□ -2.17
DDX54Q8TDD1 MIR451A-201ENST00000385059 72 ntBASIC1.47□□□□□ -2.17
DDX54Q8TDD1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.47□□□□□ -2.17
DDX54Q8TDD1 Y_RNA.660-201ENST00000516002 120 ntBASIC1.47□□□□□ -2.17
DDX54Q8TDD1 RNU7-161P-201ENST00000517289 62 ntBASIC1.47□□□□□ -2.17
DDX54Q8TDD1 Y_RNA.371-201ENST00000365591 113 ntBASIC1.46□□□□□ -2.18
DDX54Q8TDD1 RNU6-935P-201ENST00000410371 100 ntBASIC1.46□□□□□ -2.18
DDX54Q8TDD1 Y_RNA.36-201ENST00000362602 112 ntBASIC1.45□□□□□ -2.18
DDX54Q8TDD1 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
DDX54Q8TDD1 RNU7-104P-201ENST00000459398 79 ntBASIC1.45□□□□□ -2.18
DDX54Q8TDD1 AC002350.1-201ENST00000490759 375 ntBASIC1.45□□□□□ -2.18
DDX54Q8TDD1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.45□□□□□ -2.18
DDX54Q8TDD1 RNU5F-1-201ENST00000362507 117 ntBASIC1.44□□□□□ -2.18
DDX54Q8TDD1 MIR548AG2-201ENST00000581228 64 ntBASIC1.44□□□□□ -2.18
DDX54Q8TDD1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
DDX54Q8TDD1 MIR373-201ENST00000362273 69 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 RNU6-330P-201ENST00000363015 107 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 RNA5SP403-201ENST00000363598 108 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 Y_RNA.264-201ENST00000364665 102 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 SNORD105-201ENST00000386910 85 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 MIR942-201ENST00000401111 86 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 RNU6-380P-201ENST00000410207 107 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 RNU6-523P-201ENST00000516304 54 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 RNU7-13P-201ENST00000516413 62 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.43□□□□□ -2.18
DDX54Q8TDD1 Y_RNA.174-201ENST00000363781 105 ntBASIC1.42□□□□□ -2.18
DDX54Q8TDD1 RNA5SP117-201ENST00000365294 118 ntBASIC1.42□□□□□ -2.18
DDX54Q8TDD1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
DDX54Q8TDD1 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 SNORA24B-201ENST00000384176 131 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 MIR2113-201ENST00000459007 91 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 RNU6-303P-201ENST00000517091 106 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 YWHAEP2-201ENST00000580066 112 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 MIR3920-201ENST00000581751 86 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 YWHAEP3-201ENST00000582767 121 ntBASIC1.41□□□□□ -2.18
DDX54Q8TDD1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
DDX54Q8TDD1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
DDX54Q8TDD1 RNU6-824P-201ENST00000363724 104 ntBASIC1.4□□□□□ -2.19
DDX54Q8TDD1 RNY4P3-201ENST00000365254 95 ntBASIC1.4□□□□□ -2.19
DDX54Q8TDD1 SNORD114-21-201ENST00000606412 72 ntBASIC1.4□□□□□ -2.19
DDX54Q8TDD1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.39□□□□□ -2.19
DDX54Q8TDD1 Y_RNA.374-201ENST00000365606 101 ntBASIC1.39□□□□□ -2.19
DDX54Q8TDD1 Y_RNA.545-201ENST00000384652 105 ntBASIC1.39□□□□□ -2.19
DDX54Q8TDD1 MIR19B1-201ENST00000384829 87 ntBASIC1.39□□□□□ -2.19
DDX54Q8TDD1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
DDX54Q8TDD1 RNU6-1057P-201ENST00000517162 102 ntBASIC1.39□□□□□ -2.19
DDX54Q8TDD1 RNU6-340P-201ENST00000364005 107 ntBASIC1.38□□□□□ -2.19
DDX54Q8TDD1 RNU6-1126P-201ENST00000384002 107 ntBASIC1.38□□□□□ -2.19
DDX54Q8TDD1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.38□□□□□ -2.19
DDX54Q8TDD1 AC074348.1-201ENST00000426503 132 ntBASIC1.38□□□□□ -2.19
DDX54Q8TDD1 AC073261.1-201ENST00000429409 121 ntBASIC1.38□□□□□ -2.19
DDX54Q8TDD1 FABP5P4-201ENST00000437203 171 ntBASIC1.38□□□□□ -2.19
DDX54Q8TDD1 U7.7-201ENST00000459276 60 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms