Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 MIR6857-201ENST00000613267 93 ntBASIC1.16□□□□□ -2.22
SHCBP1Q8NEM2 uc_338.16-201ENST00000621804 95 ntBASIC1.16□□□□□ -2.22
SHCBP1Q8NEM2 U6.100-201ENST00000636230 99 ntBASIC1.16□□□□□ -2.22
SHCBP1Q8NEM2 MIR532-201ENST00000385025 91 ntBASIC1.15□□□□□ -2.23
SHCBP1Q8NEM2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.15□□□□□ -2.23
SHCBP1Q8NEM2 AC244505.6-201ENST00000452829 130 ntBASIC1.15□□□□□ -2.23
SHCBP1Q8NEM2 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
SHCBP1Q8NEM2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.15□□□□□ -2.23
SHCBP1Q8NEM2 SNORA18.5-201ENST00000516616 101 ntBASIC1.15□□□□□ -2.23
SHCBP1Q8NEM2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.15□□□□□ -2.23
SHCBP1Q8NEM2 MIR548U-201ENST00000390728 81 ntBASIC1.14□□□□□ -2.23
SHCBP1Q8NEM2 RNU6-279P-201ENST00000391297 101 ntBASIC1.14□□□□□ -2.23
SHCBP1Q8NEM2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
SHCBP1Q8NEM2 RNA5SP436-201ENST00000516020 115 ntBASIC1.14□□□□□ -2.23
SHCBP1Q8NEM2 RNU6-1265P-201ENST00000516342 103 ntBASIC1.14□□□□□ -2.23
SHCBP1Q8NEM2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
SHCBP1Q8NEM2 Y_RNA.221-201ENST00000364248 96 ntBASIC1.13□□□□□ -2.23
SHCBP1Q8NEM2 Y_RNA.491-201ENST00000384417 107 ntBASIC1.13□□□□□ -2.23
SHCBP1Q8NEM2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SHCBP1Q8NEM2 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
SHCBP1Q8NEM2 FABP5P4-201ENST00000437203 171 ntBASIC1.13□□□□□ -2.23
SHCBP1Q8NEM2 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
SHCBP1Q8NEM2 SNORD105-201ENST00000386910 85 ntBASIC1.12□□□□□ -2.23
SHCBP1Q8NEM2 MIR942-201ENST00000401111 86 ntBASIC1.12□□□□□ -2.23
SHCBP1Q8NEM2 U7.7-201ENST00000459276 60 ntBASIC1.12□□□□□ -2.23
SHCBP1Q8NEM2 AL136317.1-201ENST00000612653 226 ntBASIC1.12□□□□□ -2.23
SHCBP1Q8NEM2 Y_RNA.94-201ENST00000363068 106 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 RNU6-624P-201ENST00000363411 107 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 MIR200A-201ENST00000384875 90 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 AC002350.1-201ENST00000490759 375 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 RNU6-857P-201ENST00000515893 110 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 MIR4696-201ENST00000581431 70 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 MTRNR2L2-201ENST00000604882 87 ntBASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SHCBP1Q8NEM2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SHCBP1Q8NEM2 RNU6-664P-201ENST00000362381 107 ntBASIC1.1□□□□□ -2.23
SHCBP1Q8NEM2 SNORD101-201ENST00000384027 73 ntBASIC1.1□□□□□ -2.23
SHCBP1Q8NEM2 SNORD90-201ENST00000391145 111 ntBASIC1.1□□□□□ -2.23
SHCBP1Q8NEM2 AL450471.1-201ENST00000447509 127 ntBASIC1.1□□□□□ -2.23
SHCBP1Q8NEM2 MIR3973-201ENST00000579824 107 ntBASIC1.1□□□□□ -2.23
SHCBP1Q8NEM2 RN7SL793P-201ENST00000583259 296 ntBASIC1.1□□□□□ -2.23
SHCBP1Q8NEM2 MIR4712-201ENST00000583750 82 ntBASIC1.1□□□□□ -2.23
SHCBP1Q8NEM2 RNU6-478P-201ENST00000363904 110 ntBASIC1.09□□□□□ -2.23
SHCBP1Q8NEM2 Y_RNA.596-201ENST00000410462 109 ntBASIC1.09□□□□□ -2.23
SHCBP1Q8NEM2 CYP3A137P-201ENST00000562436 69 ntBASIC1.09□□□□□ -2.23
SHCBP1Q8NEM2 SNORD115-24-201ENST00000363528 82 ntBASIC1.08□□□□□ -2.24
SHCBP1Q8NEM2 Y_RNA.239-201ENST00000364444 113 ntBASIC1.08□□□□□ -2.24
SHCBP1Q8NEM2 MIR644A-201ENST00000385262 94 ntBASIC1.08□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-129P-201ENST00000391022 107 ntBASIC1.08□□□□□ -2.24
SHCBP1Q8NEM2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.08□□□□□ -2.24
SHCBP1Q8NEM2 SNORA63.2-201ENST00000362603 126 ntBASIC1.07□□□□□ -2.24
SHCBP1Q8NEM2 RNA5SP403-201ENST00000363598 108 ntBASIC1.07□□□□□ -2.24
SHCBP1Q8NEM2 Y_RNA.244-201ENST00000364484 109 ntBASIC1.07□□□□□ -2.24
SHCBP1Q8NEM2 MIR216A-201ENST00000385063 110 ntBASIC1.07□□□□□ -2.24
SHCBP1Q8NEM2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.07□□□□□ -2.24
SHCBP1Q8NEM2 RNU7-161P-201ENST00000517289 62 ntBASIC1.07□□□□□ -2.24
SHCBP1Q8NEM2 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
SHCBP1Q8NEM2 RNA5SP117-201ENST00000365294 118 ntBASIC1.06□□□□□ -2.24
SHCBP1Q8NEM2 Y_RNA.374-201ENST00000365606 101 ntBASIC1.06□□□□□ -2.24
SHCBP1Q8NEM2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-315P-201ENST00000362666 107 ntBASIC1.05□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-161P-201ENST00000363051 106 ntBASIC1.05□□□□□ -2.24
SHCBP1Q8NEM2 Y_RNA.207-201ENST00000364142 106 ntBASIC1.05□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-24P-201ENST00000384440 107 ntBASIC1.05□□□□□ -2.24
SHCBP1Q8NEM2 MIR573-201ENST00000384964 99 ntBASIC1.05□□□□□ -2.24
SHCBP1Q8NEM2 FGF7P7-201ENST00000514120 227 ntBASIC1.05□□□□□ -2.24
SHCBP1Q8NEM2 RNA5SP255-201ENST00000516370 107 ntBASIC1.05□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-557P-201ENST00000516842 110 ntBASIC1.05□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-1051P-201ENST00000365471 102 ntBASIC1.04□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-935P-201ENST00000410371 100 ntBASIC1.04□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-1108P-201ENST00000516308 104 ntBASIC1.04□□□□□ -2.24
SHCBP1Q8NEM2 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.04□□□□□ -2.24
SHCBP1Q8NEM2 RNU7-104P-201ENST00000459398 79 ntBASIC1.03□□□□□ -2.24
SHCBP1Q8NEM2 RNU6-287P-201ENST00000516230 98 ntBASIC1.03□□□□□ -2.24
SHCBP1Q8NEM2 RNU7-13P-201ENST00000516413 62 ntBASIC1.03□□□□□ -2.24
SHCBP1Q8NEM2 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
SHCBP1Q8NEM2 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
SHCBP1Q8NEM2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
SHCBP1Q8NEM2 SNORD115-44-201ENST00000365391 82 ntBASIC1.02□□□□□ -2.25
SHCBP1Q8NEM2 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
SHCBP1Q8NEM2 MIR3920-201ENST00000581751 86 ntBASIC1.02□□□□□ -2.25
SHCBP1Q8NEM2 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
SHCBP1Q8NEM2 MIR3140-201ENST00000583685 90 ntBASIC1.02□□□□□ -2.25
SHCBP1Q8NEM2 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
SHCBP1Q8NEM2 MIRLET7A1-201ENST00000362295 80 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-686P-201ENST00000364839 107 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 SNORD28-201ENST00000384706 75 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 MIR451A-201ENST00000385059 72 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 SNORD77.2-201ENST00000391045 68 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 snoU13.17-201ENST00000458802 104 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-469P-201ENST00000516253 101 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-135P-201ENST00000516769 101 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 MIR548AG2-201ENST00000581228 64 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 MIR4639-201ENST00000584938 69 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.01□□□□□ -2.25
SHCBP1Q8NEM2 RNU6-208P-201ENST00000362431 107 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms