Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC021753.1-201ENST00000635724 168 ntBASIC-1.42□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 RNU6-713P-201ENST00000384761 107 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 MT-TD-201ENST00000387419 68 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 MIR3646-201ENST00000578301 84 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 MIR382-201ENST00000637119 76 ntBASIC-1.43□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.44□□□□□ -2.64
CCDC112Q8NEF3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.44□□□□□ -2.64
CCDC112Q8NEF3 SNORA7.5-201ENST00000410672 110 ntBASIC-1.44□□□□□ -2.64
CCDC112Q8NEF3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.44□□□□□ -2.64
CCDC112Q8NEF3 AL512310.12-203ENST00000640543 90 ntBASIC-1.44□□□□□ -2.64
CCDC112Q8NEF3 MIR1302-6-201ENST00000408466 90 ntBASIC-1.45□□□□□ -2.64
CCDC112Q8NEF3 AC107027.2-201ENST00000512197 115 ntBASIC-1.45□□□□□ -2.64
CCDC112Q8NEF3 RN7SKP19-201ENST00000516016 252 ntBASIC-1.45□□□□□ -2.64
CCDC112Q8NEF3 MIR8062-201ENST00000621515 85 ntBASIC-1.45□□□□□ -2.64
CCDC112Q8NEF3 MIR198-201ENST00000637333 62 ntBASIC-1.45□□□□□ -2.64
CCDC112Q8NEF3 MIR548P-201ENST00000408336 84 ntBASIC-1.46□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.46□□□□□ -2.64
CCDC112Q8NEF3 RNU6-75P-201ENST00000515944 104 ntBASIC-1.47□□□□□ -2.64
CCDC112Q8NEF3 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.47□□□□□ -2.64
CCDC112Q8NEF3 AL160413.1-201ENST00000622780 310 ntBASIC-1.47□□□□□ -2.64
CCDC112Q8NEF3 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.48□□□□□ -2.65
CCDC112Q8NEF3 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.48□□□□□ -2.65
CCDC112Q8NEF3 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.48□□□□□ -2.65
CCDC112Q8NEF3 MIR4723-201ENST00000585070 81 ntBASIC-1.48□□□□□ -2.65
CCDC112Q8NEF3 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.48□□□□□ -2.65
CCDC112Q8NEF3 U6.104-201ENST00000637979 90 ntBASIC-1.48□□□□□ -2.65
CCDC112Q8NEF3 RNU6-363P-201ENST00000362895 105 ntBASIC-1.49□□□□□ -2.65
CCDC112Q8NEF3 SNORA63.6-201ENST00000364921 119 ntBASIC-1.49□□□□□ -2.65
CCDC112Q8NEF3 SNORD127-201ENST00000458892 86 ntBASIC-1.49□□□□□ -2.65
CCDC112Q8NEF3 MIR3171-201ENST00000584270 74 ntBASIC-1.49□□□□□ -2.65
CCDC112Q8NEF3 RNU6-647P-201ENST00000364243 107 ntBASIC-1.5□□□□□ -2.65
CCDC112Q8NEF3 RNU6-312P-201ENST00000364629 107 ntBASIC-1.5□□□□□ -2.65
CCDC112Q8NEF3 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.5□□□□□ -2.65
CCDC112Q8NEF3 MIR124-2-201ENST00000385081 109 ntBASIC-1.5□□□□□ -2.65
CCDC112Q8NEF3 RNU6-918P-201ENST00000391219 106 ntBASIC-1.5□□□□□ -2.65
CCDC112Q8NEF3 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.5□□□□□ -2.65
CCDC112Q8NEF3 RNU6-719P-201ENST00000516671 104 ntBASIC-1.5□□□□□ -2.65
CCDC112Q8NEF3 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.5□□□□□ -2.65
CCDC112Q8NEF3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.51□□□□□ -2.65
CCDC112Q8NEF3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.51□□□□□ -2.65
CCDC112Q8NEF3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.51□□□□□ -2.65
CCDC112Q8NEF3 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.51□□□□□ -2.65
CCDC112Q8NEF3 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.51□□□□□ -2.65
CCDC112Q8NEF3 AC020661.2-201ENST00000560114 134 ntBASIC-1.51□□□□□ -2.65
CCDC112Q8NEF3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.51□□□□□ -2.65
CCDC112Q8NEF3 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.52□□□□□ -2.65
CCDC112Q8NEF3 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.52□□□□□ -2.65
CCDC112Q8NEF3 SNORD58.1-201ENST00000391313 66 ntBASIC-1.52□□□□□ -2.65
CCDC112Q8NEF3 MTND2P23-201ENST00000422990 651 ntBASIC-1.52□□□□□ -2.65
CCDC112Q8NEF3 MIR3115-201ENST00000577915 68 ntBASIC-1.52□□□□□ -2.65
CCDC112Q8NEF3 MIR759-201ENST00000390224 91 ntBASIC-1.53□□□□□ -2.65
CCDC112Q8NEF3 AC022028.1-201ENST00000412054 408 ntBASIC-1.53□□□□□ -2.65
CCDC112Q8NEF3 RNU6-635P-201ENST00000516651 102 ntBASIC-1.53□□□□□ -2.65
CCDC112Q8NEF3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.53□□□□□ -2.65
CCDC112Q8NEF3 MIR3658-201ENST00000636291 56 ntBASIC-1.53□□□□□ -2.65
CCDC112Q8NEF3 RNU6-495P-201ENST00000362995 107 ntBASIC-1.54□□□□□ -2.66
CCDC112Q8NEF3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.54□□□□□ -2.66
CCDC112Q8NEF3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.54□□□□□ -2.66
CCDC112Q8NEF3 FGF7P7-201ENST00000514120 227 ntBASIC-1.54□□□□□ -2.66
CCDC112Q8NEF3 RNU7-121P-201ENST00000516604 62 ntBASIC-1.54□□□□□ -2.66
CCDC112Q8NEF3 MIR3121-201ENST00000579680 77 ntBASIC-1.54□□□□□ -2.66
CCDC112Q8NEF3 MIR3165-201ENST00000579874 75 ntBASIC-1.54□□□□□ -2.66
CCDC112Q8NEF3 AL442128.1-201ENST00000615151 90 ntBASIC-1.54□□□□□ -2.66
CCDC112Q8NEF3 RNU6-238P-201ENST00000363313 106 ntBASIC-1.55□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.55□□□□□ -2.66
CCDC112Q8NEF3 MIR548D2-201ENST00000384955 97 ntBASIC-1.55□□□□□ -2.66
CCDC112Q8NEF3 MIR548H3-201ENST00000408771 118 ntBASIC-1.55□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.55□□□□□ -2.66
CCDC112Q8NEF3 MIR4464-201ENST00000580818 92 ntBASIC-1.55□□□□□ -2.66
CCDC112Q8NEF3 MIR548S-201ENST00000581352 82 ntBASIC-1.55□□□□□ -2.66
CCDC112Q8NEF3 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 RNU6-208P-201ENST00000362431 107 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 RNU6-409P-201ENST00000384114 104 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 RNY3P14-201ENST00000384309 102 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 RNU6-239P-201ENST00000390990 99 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 RNU2-38P-201ENST00000410856 79 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 MIR4306-201ENST00000583390 91 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.56□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.57□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.57□□□□□ -2.66
CCDC112Q8NEF3 SNORD37.2-201ENST00000391075 66 ntBASIC-1.57□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.58□□□□□ -2.66
CCDC112Q8NEF3 SNORA33.2-201ENST00000365413 134 ntBASIC-1.58□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.58□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.58□□□□□ -2.66
CCDC112Q8NEF3 MIR4536-1-201ENST00000583537 88 ntBASIC-1.58□□□□□ -2.66
CCDC112Q8NEF3 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.59□□□□□ -2.66
CCDC112Q8NEF3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.59□□□□□ -2.66
CCDC112Q8NEF3 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.59□□□□□ -2.66
CCDC112Q8NEF3 MTATP8P1-201ENST00000467115 207 ntBASIC-1.59□□□□□ -2.66
CCDC112Q8NEF3 RNU6-65P-201ENST00000516332 98 ntBASIC-1.59□□□□□ -2.66
CCDC112Q8NEF3 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms