Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 RNY3P2-201ENST00000362918 102 ntBASIC0.18□□□□□ -2.38
USP38Q8NB14 RNU6-22P-201ENST00000384355 107 ntBASIC0.18□□□□□ -2.38
USP38Q8NB14 MIR181B2-201ENST00000385004 89 ntBASIC0.18□□□□□ -2.38
USP38Q8NB14 MTRNR2L2-201ENST00000604882 87 ntBASIC0.18□□□□□ -2.38
USP38Q8NB14 RNU6-86P-201ENST00000606534 107 ntBASIC0.18□□□□□ -2.38
USP38Q8NB14 SNORD114-31-201ENST00000363219 75 ntBASIC0.17□□□□□ -2.38
USP38Q8NB14 RNU6-957P-201ENST00000363652 99 ntBASIC0.17□□□□□ -2.38
USP38Q8NB14 RNU6-1168P-201ENST00000390831 104 ntBASIC0.17□□□□□ -2.38
USP38Q8NB14 Y_RNA.659-201ENST00000515994 113 ntBASIC0.17□□□□□ -2.38
USP38Q8NB14 TRDV1-202ENST00000621643 102 ntBASIC0.17□□□□□ -2.38
USP38Q8NB14 Y_RNA.163-201ENST00000363702 113 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNU6-1107P-201ENST00000364817 104 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNA5SP128-201ENST00000365305 116 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNU6-1014P-201ENST00000383940 103 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNU6-880P-201ENST00000384526 107 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 AL603908.1-201ENST00000406098 201 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNA5SP484-201ENST00000458857 111 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNU6-848P-201ENST00000515948 107 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNU6-617P-201ENST00000516147 107 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNU6-473P-201ENST00000516164 107 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNU6-1049P-201ENST00000516414 107 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 AC141557.1-201ENST00000540982 400 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 uc_338.28-201ENST00000612082 187 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 AC132825.6-201ENST00000638861 357 ntBASIC0.16□□□□□ -2.38
USP38Q8NB14 RNU6-1244P-201ENST00000363614 108 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 RNA5SP205-201ENST00000364653 136 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 RNU6-1144P-201ENST00000384247 104 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 RNU6-1117P-201ENST00000384525 104 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 MIR643-201ENST00000385267 97 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 RNU6-127P-201ENST00000390897 107 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.15□□□□□ -2.39
USP38Q8NB14 snoU13.11-201ENST00000459219 104 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 NAMPTP3-201ENST00000569273 224 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 MIR548Z-201ENST00000584743 97 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 AC025521.1-201ENST00000621624 286 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 U6.100-201ENST00000636230 99 ntBASIC0.15□□□□□ -2.39
USP38Q8NB14 Y_RNA.78-201ENST00000362970 110 ntBASIC0.14□□□□□ -2.39
USP38Q8NB14 MIR501-201ENST00000390204 84 ntBASIC0.14□□□□□ -2.39
USP38Q8NB14 SNORA19.1-201ENST00000410656 129 ntBASIC0.14□□□□□ -2.39
USP38Q8NB14 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
USP38Q8NB14 AC073869.9-201ENST00000641610 120 ntBASIC0.14□□□□□ -2.39
USP38Q8NB14 RNU6-509P-201ENST00000363519 107 ntBASIC0.13□□□□□ -2.39
USP38Q8NB14 RNU6-476P-201ENST00000384726 107 ntBASIC0.13□□□□□ -2.39
USP38Q8NB14 MIR519E-201ENST00000385075 84 ntBASIC0.13□□□□□ -2.39
USP38Q8NB14 AC006210.1-201ENST00000424882 111 ntBASIC0.13□□□□□ -2.39
USP38Q8NB14 RNU6-287P-201ENST00000516230 98 ntBASIC0.13□□□□□ -2.39
USP38Q8NB14 MIR6129-201ENST00000616087 109 ntBASIC0.13□□□□□ -2.39
USP38Q8NB14 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 RNU6-1125P-201ENST00000363601 107 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 Y_RNA.467-201ENST00000384297 102 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 RNU6-480P-201ENST00000384332 107 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 RNU6-1154P-201ENST00000391001 104 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 RNU6-1064P-201ENST00000410626 104 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.12□□□□□ -2.39
USP38Q8NB14 RNU7-74P-201ENST00000459104 62 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 RNU6-62P-201ENST00000516526 102 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 MIR5706-201ENST00000579841 80 ntBASIC0.12□□□□□ -2.39
USP38Q8NB14 RNU1-141P-201ENST00000364623 158 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 Y_RNA.457-201ENST00000384237 111 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 MIR617-201ENST00000385030 97 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 SNORD110-201ENST00000408189 75 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 MIR2113-201ENST00000459007 91 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 RNU6-795P-201ENST00000516323 103 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 RNU6-412P-201ENST00000516434 106 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 MIR4777-201ENST00000583710 86 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 MIR4723-201ENST00000585070 81 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
USP38Q8NB14 MIR101-1-201ENST00000362265 75 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 Y_RNA.95-201ENST00000363079 95 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 SNORD114-9-201ENST00000364370 72 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 SNORD115-44-201ENST00000365391 82 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 SNORA51.5-201ENST00000384126 131 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 MIR548H2-201ENST00000408874 88 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 Y_RNA.596-201ENST00000410462 109 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 HMGN2P22-201ENST00000427588 175 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 AL513043.2-201ENST00000573941 143 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 U7.6-201ENST00000610841 64 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 AC012531.4-201ENST00000616509 177 ntBASIC0.1□□□□□ -2.39
USP38Q8NB14 SNORA42.1-201ENST00000363515 137 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 Y_RNA.207-201ENST00000364142 106 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 SNORD45B-201ENST00000364617 72 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 Y_RNA.283-201ENST00000364798 112 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 SNORD113-1-201ENST00000365321 69 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 AL606753.1-201ENST00000427435 87 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 AC093423.1-201ENST00000440817 142 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 RNU6-479P-201ENST00000516348 105 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 RNA5SP67-201ENST00000516422 131 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 MIR4667-201ENST00000578933 66 ntBASIC0.09□□□□□ -2.4
USP38Q8NB14 MIR610-201ENST00000385139 96 ntBASIC0.08□□□□□ -2.4
USP38Q8NB14 Y_RNA.601-201ENST00000410500 113 ntBASIC0.08□□□□□ -2.4
USP38Q8NB14 Y_RNA.610-201ENST00000410681 103 ntBASIC0.08□□□□□ -2.4
USP38Q8NB14 RNU6-75P-201ENST00000515944 104 ntBASIC0.08□□□□□ -2.4
USP38Q8NB14 MIR4696-201ENST00000581431 70 ntBASIC0.08□□□□□ -2.4
USP38Q8NB14 MIR4677-201ENST00000584153 80 ntBASIC0.08□□□□□ -2.4
USP38Q8NB14 MIR3925-201ENST00000584674 77 ntBASIC0.08□□□□□ -2.4
USP38Q8NB14 MIR548AD-201ENST00000584780 82 ntBASIC0.08□□□□□ -2.4
USP38Q8NB14 AC103810.7-201ENST00000607821 91 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms