Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU6-65P-201ENST00000516332 98 ntBASIC1.07□□□□□ -2.24
SLC44A3Q8N4M1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.07□□□□□ -2.24
SLC44A3Q8N4M1 RNU6-638P-201ENST00000516582 104 ntBASIC1.07□□□□□ -2.24
SLC44A3Q8N4M1 AC104996.3-201ENST00000590718 94 ntBASIC1.07□□□□□ -2.24
SLC44A3Q8N4M1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC44A3Q8N4M1 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
SLC44A3Q8N4M1 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
SLC44A3Q8N4M1 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
SLC44A3Q8N4M1 SNORA25.13-201ENST00000516395 103 ntBASIC1.06□□□□□ -2.24
SLC44A3Q8N4M1 SNORA31.14-201ENST00000516728 116 ntBASIC1.06□□□□□ -2.24
SLC44A3Q8N4M1 MIR3973-201ENST00000579824 107 ntBASIC1.06□□□□□ -2.24
SLC44A3Q8N4M1 U6.100-201ENST00000636230 99 ntBASIC1.06□□□□□ -2.24
SLC44A3Q8N4M1 MIRLET7F1-201ENST00000362202 87 ntBASIC1.05□□□□□ -2.24
SLC44A3Q8N4M1 RNU6-624P-201ENST00000363411 107 ntBASIC1.05□□□□□ -2.24
SLC44A3Q8N4M1 CYP3A137P-201ENST00000562436 69 ntBASIC1.05□□□□□ -2.24
SLC44A3Q8N4M1 Y_RNA.94-201ENST00000363068 106 ntBASIC1.04□□□□□ -2.24
SLC44A3Q8N4M1 RNU6-652P-201ENST00000365488 107 ntBASIC1.04□□□□□ -2.24
SLC44A3Q8N4M1 MIR520H-201ENST00000385126 88 ntBASIC1.04□□□□□ -2.24
SLC44A3Q8N4M1 MIR4796-201ENST00000580742 81 ntBASIC1.04□□□□□ -2.24
SLC44A3Q8N4M1 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
SLC44A3Q8N4M1 SNORD115-37-201ENST00000363768 82 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 Y_RNA.491-201ENST00000384417 107 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 MIR200A-201ENST00000384875 90 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 MIR193B-201ENST00000384907 83 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 U7.7-201ENST00000459276 60 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 AC002350.1-201ENST00000490759 375 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 SNORA18.5-201ENST00000516616 101 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 MIR4712-201ENST00000583750 82 ntBASIC1.03□□□□□ -2.24
SLC44A3Q8N4M1 Y_RNA.174-201ENST00000363781 105 ntBASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 RNU6-478P-201ENST00000363904 110 ntBASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 MIR548U-201ENST00000390728 81 ntBASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 SNORD89-201ENST00000390981 114 ntBASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 RNU6-857P-201ENST00000515893 110 ntBASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 MIR1273G-201ENST00000577677 100 ntBASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 MIR4696-201ENST00000581431 70 ntBASIC1.02□□□□□ -2.25
SLC44A3Q8N4M1 RNA5SP403-201ENST00000363598 108 ntBASIC1.01□□□□□ -2.25
SLC44A3Q8N4M1 RNA5SP457-201ENST00000363657 124 ntBASIC1.01□□□□□ -2.25
SLC44A3Q8N4M1 SNORD105-201ENST00000386910 85 ntBASIC1.01□□□□□ -2.25
SLC44A3Q8N4M1 SNORD90-201ENST00000391145 111 ntBASIC1.01□□□□□ -2.25
SLC44A3Q8N4M1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.01□□□□□ -2.25
SLC44A3Q8N4M1 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
SLC44A3Q8N4M1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SLC44A3Q8N4M1 RNU6-664P-201ENST00000362381 107 ntBASIC1□□□□□ -2.25
SLC44A3Q8N4M1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1□□□□□ -2.25
SLC44A3Q8N4M1 RNU6-557P-201ENST00000516842 110 ntBASIC1□□□□□ -2.25
SLC44A3Q8N4M1 AL136317.1-201ENST00000612653 226 ntBASIC1□□□□□ -2.25
SLC44A3Q8N4M1 Y_RNA.221-201ENST00000364248 96 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 SNORD101-201ENST00000384027 73 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 MIR573-201ENST00000384964 99 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 MIR942-201ENST00000401111 86 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 Y_RNA.596-201ENST00000410462 109 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 RNA5SP255-201ENST00000516370 107 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 RNU7-161P-201ENST00000517289 62 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 AL590095.2-201ENST00000604136 117 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
SLC44A3Q8N4M1 SNORA63.2-201ENST00000362603 126 ntBASIC0.98□□□□□ -2.25
SLC44A3Q8N4M1 RNU6-315P-201ENST00000362666 107 ntBASIC0.98□□□□□ -2.25
SLC44A3Q8N4M1 Y_RNA.68-201ENST00000362881 102 ntBASIC0.98□□□□□ -2.25
SLC44A3Q8N4M1 AL450471.1-201ENST00000447509 127 ntBASIC0.98□□□□□ -2.25
SLC44A3Q8N4M1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SLC44A3Q8N4M1 SNORD115-24-201ENST00000363528 82 ntBASIC0.97□□□□□ -2.25
SLC44A3Q8N4M1 SNORD114-24-201ENST00000365029 72 ntBASIC0.97□□□□□ -2.25
SLC44A3Q8N4M1 RNU6-129P-201ENST00000391022 107 ntBASIC0.97□□□□□ -2.25
SLC44A3Q8N4M1 FGF7P7-201ENST00000514120 227 ntBASIC0.97□□□□□ -2.25
SLC44A3Q8N4M1 Y_RNA.207-201ENST00000364142 106 ntBASIC0.96□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-24P-201ENST00000384440 107 ntBASIC0.96□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-935P-201ENST00000410371 100 ntBASIC0.96□□□□□ -2.26
SLC44A3Q8N4M1 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
SLC44A3Q8N4M1 MIR548AG2-201ENST00000581228 64 ntBASIC0.96□□□□□ -2.26
SLC44A3Q8N4M1 MIRLET7A1-201ENST00000362295 80 ntBASIC0.95□□□□□ -2.26
SLC44A3Q8N4M1 Y_RNA.239-201ENST00000364444 113 ntBASIC0.95□□□□□ -2.26
SLC44A3Q8N4M1 MIR644A-201ENST00000385262 94 ntBASIC0.95□□□□□ -2.26
SLC44A3Q8N4M1 Y_RNA.681-201ENST00000516445 113 ntBASIC0.95□□□□□ -2.26
SLC44A3Q8N4M1 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.95□□□□□ -2.26
SLC44A3Q8N4M1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 SNORD18A-201ENST00000363753 72 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 Y_RNA.244-201ENST00000364484 109 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 SNORD115-44-201ENST00000365391 82 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-1051P-201ENST00000365471 102 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 SNORA24B-201ENST00000384176 131 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-135P-201ENST00000516769 101 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 MIR3612-201ENST00000579753 87 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 MIR3920-201ENST00000581751 86 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 MIR4639-201ENST00000584938 69 ntBASIC0.94□□□□□ -2.26
SLC44A3Q8N4M1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.93□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.93□□□□□ -2.26
SLC44A3Q8N4M1 Y_RNA.532-201ENST00000384590 113 ntBASIC0.93□□□□□ -2.26
SLC44A3Q8N4M1 SNORD28-201ENST00000384706 75 ntBASIC0.93□□□□□ -2.26
SLC44A3Q8N4M1 Y_RNA.660-201ENST00000516002 120 ntBASIC0.93□□□□□ -2.26
SLC44A3Q8N4M1 RNU6-287P-201ENST00000516230 98 ntBASIC0.93□□□□□ -2.26
SLC44A3Q8N4M1 AC025627.3-201ENST00000582078 182 ntBASIC0.93□□□□□ -2.26
SLC44A3Q8N4M1 MIR924-201ENST00000638017 53 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms