Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
UBE3BQ7Z3V4 Y_RNA.620-201ENST00000411009 88 ntBASIC0.81□□□□□ -2.28
UBE3BQ7Z3V4 RNU6-65P-201ENST00000516332 98 ntBASIC0.81□□□□□ -2.28
UBE3BQ7Z3V4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.81□□□□□ -2.28
UBE3BQ7Z3V4 MIR4668-201ENST00000582284 70 ntBASIC0.81□□□□□ -2.28
UBE3BQ7Z3V4 RN7SL793P-201ENST00000583259 296 ntBASIC0.81□□□□□ -2.28
UBE3BQ7Z3V4 RNU6-219P-201ENST00000364728 107 ntBASIC0.8□□□□□ -2.28
UBE3BQ7Z3V4 RNU6-675P-201ENST00000384236 104 ntBASIC0.8□□□□□ -2.28
UBE3BQ7Z3V4 RNY1P4-201ENST00000384595 115 ntBASIC0.8□□□□□ -2.28
UBE3BQ7Z3V4 Y_RNA.558-201ENST00000384685 113 ntBASIC0.8□□□□□ -2.28
UBE3BQ7Z3V4 U6.100-201ENST00000636230 99 ntBASIC0.8□□□□□ -2.28
UBE3BQ7Z3V4 RNU6-497P-201ENST00000365316 104 ntBASIC0.79□□□□□ -2.28
UBE3BQ7Z3V4 SNORD115-44-201ENST00000365391 82 ntBASIC0.79□□□□□ -2.28
UBE3BQ7Z3V4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.79□□□□□ -2.28
UBE3BQ7Z3V4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE3BQ7Z3V4 RNA5SP94-201ENST00000516917 108 ntBASIC0.79□□□□□ -2.28
UBE3BQ7Z3V4 AC006254.2-201ENST00000603259 279 ntBASIC0.79□□□□□ -2.28
UBE3BQ7Z3V4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.79□□□□□ -2.28
UBE3BQ7Z3V4 Y_RNA.17-201ENST00000362433 111 ntBASIC0.78□□□□□ -2.28
UBE3BQ7Z3V4 RNU6-633P-201ENST00000362612 103 ntBASIC0.78□□□□□ -2.28
UBE3BQ7Z3V4 RNU6-1134P-201ENST00000365156 101 ntBASIC0.78□□□□□ -2.28
UBE3BQ7Z3V4 SNORD41.1-201ENST00000391000 69 ntBASIC0.78□□□□□ -2.28
UBE3BQ7Z3V4 Y_RNA.593-201ENST00000410292 98 ntBASIC0.78□□□□□ -2.28
UBE3BQ7Z3V4 MIR3920-201ENST00000581751 86 ntBASIC0.78□□□□□ -2.28
UBE3BQ7Z3V4 AC067863.3-201ENST00000624172 122 ntBASIC0.78□□□□□ -2.28
UBE3BQ7Z3V4 SNORA36.1-201ENST00000363424 132 ntBASIC0.77□□□□□ -2.29
UBE3BQ7Z3V4 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-402P-201ENST00000410678 103 ntBASIC0.77□□□□□ -2.29
UBE3BQ7Z3V4 RNU7-104P-201ENST00000459398 79 ntBASIC0.77□□□□□ -2.29
UBE3BQ7Z3V4 RNU7-13P-201ENST00000516413 62 ntBASIC0.77□□□□□ -2.29
UBE3BQ7Z3V4 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-664P-201ENST00000362381 107 ntBASIC0.76□□□□□ -2.29
UBE3BQ7Z3V4 RNA5SP499-201ENST00000363982 119 ntBASIC0.76□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-726P-201ENST00000364680 107 ntBASIC0.76□□□□□ -2.29
UBE3BQ7Z3V4 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
UBE3BQ7Z3V4 SNORD101-201ENST00000384027 73 ntBASIC0.76□□□□□ -2.29
UBE3BQ7Z3V4 MIR3064-201ENST00000581130 66 ntBASIC0.76□□□□□ -2.29
UBE3BQ7Z3V4 MIR4696-201ENST00000581431 70 ntBASIC0.76□□□□□ -2.29
UBE3BQ7Z3V4 SNORA36.2-201ENST00000384004 127 ntBASIC0.75□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-811P-201ENST00000384069 107 ntBASIC0.75□□□□□ -2.29
UBE3BQ7Z3V4 MIR548U-201ENST00000390728 81 ntBASIC0.75□□□□□ -2.29
UBE3BQ7Z3V4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-509P-201ENST00000363519 107 ntBASIC0.74□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-132P-201ENST00000383863 107 ntBASIC0.74□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.74□□□□□ -2.29
UBE3BQ7Z3V4 AC104996.3-201ENST00000590718 94 ntBASIC0.74□□□□□ -2.29
UBE3BQ7Z3V4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 SNORD115-27-201ENST00000364430 82 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 MIR450A2-201ENST00000385022 100 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 MIR1236-201ENST00000408340 102 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 AC098934.3-201ENST00000430450 190 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-287P-201ENST00000516230 98 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 RNU6-267P-201ENST00000516714 103 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 RNA5SP268-201ENST00000516828 124 ntBASIC0.73□□□□□ -2.29
UBE3BQ7Z3V4 MIRLET7F1-201ENST00000362202 87 ntBASIC0.72□□□□□ -2.29
UBE3BQ7Z3V4 Y_RNA.239-201ENST00000364444 113 ntBASIC0.72□□□□□ -2.29
UBE3BQ7Z3V4 SNORA8.2-201ENST00000384372 139 ntBASIC0.72□□□□□ -2.29
UBE3BQ7Z3V4 MIR193B-201ENST00000384907 83 ntBASIC0.72□□□□□ -2.29
UBE3BQ7Z3V4 MIR519C-201ENST00000385053 87 ntBASIC0.72□□□□□ -2.29
UBE3BQ7Z3V4 MIR548AG2-201ENST00000581228 64 ntBASIC0.72□□□□□ -2.29
UBE3BQ7Z3V4 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
UBE3BQ7Z3V4 RNU4-32P-201ENST00000363404 141 ntBASIC0.71□□□□□ -2.3
UBE3BQ7Z3V4 RNA5SP517-201ENST00000364724 117 ntBASIC0.71□□□□□ -2.3
UBE3BQ7Z3V4 MIR617-201ENST00000385030 97 ntBASIC0.71□□□□□ -2.3
UBE3BQ7Z3V4 MIR936-201ENST00000401264 98 ntBASIC0.71□□□□□ -2.3
UBE3BQ7Z3V4 RNU6-762P-201ENST00000517107 102 ntBASIC0.71□□□□□ -2.3
UBE3BQ7Z3V4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 SNORD73B-201ENST00000364394 72 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 Y_RNA.491-201ENST00000384417 107 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 RNA5SP292-201ENST00000390974 118 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 RNU6-935P-201ENST00000410371 100 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 MIR2113-201ENST00000459007 91 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 RNU7-74P-201ENST00000459104 62 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 RNA5SP227-201ENST00000516184 113 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 AL162376.1-201ENST00000624117 175 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 MIR4679-1-201ENST00000637619 75 ntBASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UBE3BQ7Z3V4 RNU6-716P-201ENST00000365621 103 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 RNU6-820P-201ENST00000384273 107 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 MIR548L-201ENST00000408303 86 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 RNA5SP193-201ENST00000410353 107 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 SNORA18.5-201ENST00000516616 101 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 MIR7107-201ENST00000611489 80 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 IGLL4P-201ENST00000614590 133 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
UBE3BQ7Z3V4 RNY1P1-201ENST00000364372 112 ntBASIC0.68□□□□□ -2.3
UBE3BQ7Z3V4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBE3BQ7Z3V4 MIR1302-4-201ENST00000408701 150 ntBASIC0.68□□□□□ -2.3
UBE3BQ7Z3V4 MIR548BB-201ENST00000626714 66 ntBASIC0.68□□□□□ -2.3
UBE3BQ7Z3V4 SNORD118-201ENST00000363593 134 ntBASIC0.67□□□□□ -2.3
UBE3BQ7Z3V4 MIR519E-201ENST00000385075 84 ntBASIC0.67□□□□□ -2.3
UBE3BQ7Z3V4 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
UBE3BQ7Z3V4 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
UBE3BQ7Z3V4 MIR1273G-201ENST00000577677 100 ntBASIC0.67□□□□□ -2.3
UBE3BQ7Z3V4 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
UBE3BQ7Z3V4 SNORD114-23-201ENST00000363536 72 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms