Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 MIR18A-201ENST00000362310 71 ntBASIC1.08□□□□□ -2.24
RUFY4Q6ZNE9 SNORD18A-201ENST00000363753 72 ntBASIC1.08□□□□□ -2.24
RUFY4Q6ZNE9 SNORD115-37-201ENST00000363768 82 ntBASIC1.08□□□□□ -2.24
RUFY4Q6ZNE9 RNU6-1152P-201ENST00000384576 107 ntBASIC1.08□□□□□ -2.24
RUFY4Q6ZNE9 RNU6-267P-201ENST00000516714 103 ntBASIC1.08□□□□□ -2.24
RUFY4Q6ZNE9 RNU6-664P-201ENST00000362381 107 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 Y_RNA.205-201ENST00000364128 113 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 Y_RNA.239-201ENST00000364444 113 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 MIR608-201ENST00000384820 100 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 AL606490.4-201ENST00000423117 127 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 RNU7-13P-201ENST00000516413 62 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 RNA5SP47-201ENST00000517230 109 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 RNU7-161P-201ENST00000517289 62 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 AC104996.3-201ENST00000590718 94 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.07□□□□□ -2.24
RUFY4Q6ZNE9 MIR494-201ENST00000349529 81 ntBASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 SNORD101-201ENST00000384027 73 ntBASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 Y_RNA.426-201ENST00000384068 113 ntBASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 MIR3064-201ENST00000581130 66 ntBASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 RN7SL793P-201ENST00000583259 296 ntBASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 AC244669.1-204ENST00000621564 178 ntBASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 AC067863.3-201ENST00000624172 122 ntBASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 MIR548BB-201ENST00000626714 66 ntBASIC1.06□□□□□ -2.24
RUFY4Q6ZNE9 RNU4-32P-201ENST00000363404 141 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 RNU6-242P-201ENST00000384359 107 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 AC093729.1-201ENST00000513074 128 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 RNA5SP436-201ENST00000516020 115 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 MIR4698-201ENST00000577795 80 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 MIR4696-201ENST00000581431 70 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 MIR5588-201ENST00000581890 63 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 U6.100-201ENST00000636230 99 ntBASIC1.05□□□□□ -2.24
RUFY4Q6ZNE9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RUFY4Q6ZNE9 SNORD115-27-201ENST00000364430 82 ntBASIC1.04□□□□□ -2.24
RUFY4Q6ZNE9 RNU6-979P-201ENST00000383896 107 ntBASIC1.04□□□□□ -2.24
RUFY4Q6ZNE9 MIR216A-201ENST00000385063 110 ntBASIC1.04□□□□□ -2.24
RUFY4Q6ZNE9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.04□□□□□ -2.24
RUFY4Q6ZNE9 CYP3A137P-201ENST00000562436 69 ntBASIC1.04□□□□□ -2.24
RUFY4Q6ZNE9 RNU6-132P-201ENST00000383863 107 ntBASIC1.03□□□□□ -2.24
RUFY4Q6ZNE9 Y_RNA.491-201ENST00000384417 107 ntBASIC1.03□□□□□ -2.24
RUFY4Q6ZNE9 Y_RNA.611-201ENST00000410682 108 ntBASIC1.03□□□□□ -2.24
RUFY4Q6ZNE9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.03□□□□□ -2.24
RUFY4Q6ZNE9 AC022137.1-201ENST00000483735 151 ntBASIC1.03□□□□□ -2.24
RUFY4Q6ZNE9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 RNU6-110P-201ENST00000384508 104 ntBASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 RNU7-74P-201ENST00000459104 62 ntBASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 RNU7-104P-201ENST00000459398 79 ntBASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 RNU7-171P-201ENST00000459581 62 ntBASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 MIR3920-201ENST00000581751 86 ntBASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 MIR6828-201ENST00000636181 60 ntBASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 AC006160.2-201ENST00000637708 154 ntBASIC1.02□□□□□ -2.25
RUFY4Q6ZNE9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
RUFY4Q6ZNE9 SNORD41.1-201ENST00000391000 69 ntBASIC1.01□□□□□ -2.25
RUFY4Q6ZNE9 RNU6-935P-201ENST00000410371 100 ntBASIC1.01□□□□□ -2.25
RUFY4Q6ZNE9 RNA5SP222-201ENST00000411039 105 ntBASIC1.01□□□□□ -2.25
RUFY4Q6ZNE9 SNORA18.5-201ENST00000516616 101 ntBASIC1.01□□□□□ -2.25
RUFY4Q6ZNE9 MIRLET7F1-201ENST00000362202 87 ntBASIC1□□□□□ -2.25
RUFY4Q6ZNE9 Y_RNA.207-201ENST00000364142 106 ntBASIC1□□□□□ -2.25
RUFY4Q6ZNE9 Y_RNA.388-201ENST00000383919 113 ntBASIC1□□□□□ -2.25
RUFY4Q6ZNE9 MIR216B-201ENST00000390186 82 ntBASIC1□□□□□ -2.25
RUFY4Q6ZNE9 Y_RNA.607-201ENST00000410597 98 ntBASIC1□□□□□ -2.25
RUFY4Q6ZNE9 MIR4796-201ENST00000580742 81 ntBASIC1□□□□□ -2.25
RUFY4Q6ZNE9 Y_RNA.73-201ENST00000362910 113 ntBASIC0.99□□□□□ -2.25
RUFY4Q6ZNE9 RNU6-1276P-201ENST00000365372 104 ntBASIC0.99□□□□□ -2.25
RUFY4Q6ZNE9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.99□□□□□ -2.25
RUFY4Q6ZNE9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RUFY4Q6ZNE9 RNU6-287P-201ENST00000516230 98 ntBASIC0.99□□□□□ -2.25
RUFY4Q6ZNE9 RNU6-1057P-201ENST00000517162 102 ntBASIC0.99□□□□□ -2.25
RUFY4Q6ZNE9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.99□□□□□ -2.25
RUFY4Q6ZNE9 MIR617-201ENST00000385030 97 ntBASIC0.98□□□□□ -2.25
RUFY4Q6ZNE9 RNA5SP292-201ENST00000390974 118 ntBASIC0.98□□□□□ -2.25
RUFY4Q6ZNE9 U3.27-201ENST00000391237 200 ntBASIC0.98□□□□□ -2.25
RUFY4Q6ZNE9 AC140658.3-201ENST00000567603 271 ntBASIC0.98□□□□□ -2.25
RUFY4Q6ZNE9 RNU6-726P-201ENST00000364680 107 ntBASIC0.97□□□□□ -2.25
RUFY4Q6ZNE9 RNY4P3-201ENST00000365254 95 ntBASIC0.97□□□□□ -2.25
RUFY4Q6ZNE9 SNORA25.13-201ENST00000516395 103 ntBASIC0.97□□□□□ -2.25
RUFY4Q6ZNE9 RNA5SP94-201ENST00000516917 108 ntBASIC0.97□□□□□ -2.25
RUFY4Q6ZNE9 MIR548L-201ENST00000408303 86 ntBASIC0.96□□□□□ -2.26
RUFY4Q6ZNE9 MIR2113-201ENST00000459007 91 ntBASIC0.96□□□□□ -2.26
RUFY4Q6ZNE9 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
RUFY4Q6ZNE9 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
RUFY4Q6ZNE9 RNU7-153P-201ENST00000516455 62 ntBASIC0.96□□□□□ -2.26
RUFY4Q6ZNE9 MIR140-201ENST00000385282 100 ntBASIC0.95□□□□□ -2.26
RUFY4Q6ZNE9 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.95□□□□□ -2.26
RUFY4Q6ZNE9 RNU6-624P-201ENST00000363411 107 ntBASIC0.94□□□□□ -2.26
RUFY4Q6ZNE9 RNA5SP173-201ENST00000364857 136 ntBASIC0.94□□□□□ -2.26
RUFY4Q6ZNE9 MIR4666B-201ENST00000578142 81 ntBASIC0.94□□□□□ -2.26
RUFY4Q6ZNE9 MIR3202-2-201ENST00000635980 79 ntBASIC0.94□□□□□ -2.26
RUFY4Q6ZNE9 Y_RNA.219-201ENST00000364232 113 ntBASIC0.93□□□□□ -2.26
RUFY4Q6ZNE9 RNA5SP268-201ENST00000516828 124 ntBASIC0.93□□□□□ -2.26
RUFY4Q6ZNE9 SNORA63.2-201ENST00000362603 126 ntBASIC0.92□□□□□ -2.26
RUFY4Q6ZNE9 SNORA36.1-201ENST00000363424 132 ntBASIC0.92□□□□□ -2.26
RUFY4Q6ZNE9 SNORA36.2-201ENST00000384004 127 ntBASIC0.92□□□□□ -2.26
RUFY4Q6ZNE9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.92□□□□□ -2.26
RUFY4Q6ZNE9 FGF7P7-201ENST00000514120 227 ntBASIC0.92□□□□□ -2.26
RUFY4Q6ZNE9 Y_RNA.660-201ENST00000516002 120 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 321.9 ms