Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Y_RNA.316-201ENST00000365118 111 ntBASIC0.82□□□□□ -2.28
ZNF549Q6P9A3 MIR644A-201ENST00000385262 94 ntBASIC0.82□□□□□ -2.28
ZNF549Q6P9A3 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.685-201ENST00000516532 108 ntBASIC0.82□□□□□ -2.28
ZNF549Q6P9A3 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
ZNF549Q6P9A3 AL078603.1-201ENST00000603824 313 ntBASIC0.82□□□□□ -2.28
ZNF549Q6P9A3 MIR3202-2-201ENST00000635980 79 ntBASIC0.82□□□□□ -2.28
ZNF549Q6P9A3 RNU6-664P-201ENST00000362381 107 ntBASIC0.81□□□□□ -2.28
ZNF549Q6P9A3 MIR1255A-201ENST00000408338 113 ntBASIC0.81□□□□□ -2.28
ZNF549Q6P9A3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.81□□□□□ -2.28
ZNF549Q6P9A3 RNA5SP220-201ENST00000516298 104 ntBASIC0.81□□□□□ -2.28
ZNF549Q6P9A3 MIR4796-201ENST00000580742 81 ntBASIC0.81□□□□□ -2.28
ZNF549Q6P9A3 SNORD115-24-201ENST00000363528 82 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.437-201ENST00000384113 113 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.491-201ENST00000384417 107 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 RNA5SP225-201ENST00000410874 135 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 MIR3612-201ENST00000579753 87 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 AC025627.3-201ENST00000582078 182 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.94-201ENST00000363068 106 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 SNORD18A-201ENST00000363753 72 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 RNU6-478P-201ENST00000363904 110 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 SNORD101-201ENST00000384027 73 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 RNU6-42P-201ENST00000384165 107 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 SNORD28-201ENST00000384706 75 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.596-201ENST00000410462 109 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 MIR548AG2-201ENST00000581228 64 ntBASIC0.79□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.207-201ENST00000364142 106 ntBASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 RNA5SP117-201ENST00000365294 118 ntBASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 RNU6-652P-201ENST00000365488 107 ntBASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 MIR548U-201ENST00000390728 81 ntBASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 MIR3678-201ENST00000578455 94 ntBASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 MIR3920-201ENST00000581751 86 ntBASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 MIR6734-201ENST00000621166 68 ntBASIC0.78□□□□□ -2.28
ZNF549Q6P9A3 SNORD115-37-201ENST00000363768 82 ntBASIC0.77□□□□□ -2.29
ZNF549Q6P9A3 RNU6-279P-201ENST00000391297 101 ntBASIC0.77□□□□□ -2.29
ZNF549Q6P9A3 AL450471.1-201ENST00000447509 127 ntBASIC0.77□□□□□ -2.29
ZNF549Q6P9A3 RNU6-287P-201ENST00000516230 98 ntBASIC0.77□□□□□ -2.29
ZNF549Q6P9A3 RNA5SP47-201ENST00000517230 109 ntBASIC0.77□□□□□ -2.29
ZNF549Q6P9A3 MIR4639-201ENST00000584938 69 ntBASIC0.77□□□□□ -2.29
ZNF549Q6P9A3 MIR6788-201ENST00000618842 66 ntBASIC0.77□□□□□ -2.29
ZNF549Q6P9A3 MIR18A-201ENST00000362310 71 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 SNORA63.2-201ENST00000362603 126 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 SNORA24B-201ENST00000384176 131 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 RNU6-135P-201ENST00000516769 101 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 MIR4712-201ENST00000583750 82 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 MIR151B-201ENST00000584249 96 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 AL353765.1-201ENST00000605514 183 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 AC244669.1-204ENST00000621564 178 ntBASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.76□□□□□ -2.29
ZNF549Q6P9A3 RNU6-935P-201ENST00000410371 100 ntBASIC0.75□□□□□ -2.29
ZNF549Q6P9A3 snoU13.17-201ENST00000458802 104 ntBASIC0.75□□□□□ -2.29
ZNF549Q6P9A3 RNU6-557P-201ENST00000516842 110 ntBASIC0.75□□□□□ -2.29
ZNF549Q6P9A3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.75□□□□□ -2.29
ZNF549Q6P9A3 AC011195.1-201ENST00000578177 177 ntBASIC0.75□□□□□ -2.29
ZNF549Q6P9A3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ZNF549Q6P9A3 SNORD115-44-201ENST00000365391 82 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 RNU6-1051P-201ENST00000365471 102 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 SNORD41.1-201ENST00000391000 69 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 MIR548J-201ENST00000408833 112 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 MIR2113-201ENST00000459007 91 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 RNU7-104P-201ENST00000459398 79 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 snoU13.18-201ENST00000459483 104 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 RNU7-13P-201ENST00000516413 62 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 MIR3140-201ENST00000583685 90 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 MIR6828-201ENST00000636181 60 ntBASIC0.74□□□□□ -2.29
ZNF549Q6P9A3 SNORA36.1-201ENST00000363424 132 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 RNU6-726P-201ENST00000364680 107 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 RNU6-129P-201ENST00000391022 107 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 RNU6-857P-201ENST00000515893 110 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 RNU6-638P-201ENST00000516582 104 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
ZNF549Q6P9A3 RNU6-315P-201ENST00000362666 107 ntBASIC0.72□□□□□ -2.29
ZNF549Q6P9A3 MIR451A-201ENST00000385059 72 ntBASIC0.72□□□□□ -2.29
ZNF549Q6P9A3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
ZNF549Q6P9A3 FGF7P7-201ENST00000514120 227 ntBASIC0.72□□□□□ -2.29
ZNF549Q6P9A3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.72□□□□□ -2.29
ZNF549Q6P9A3 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
ZNF549Q6P9A3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.72□□□□□ -2.29
ZNF549Q6P9A3 MIRLET7A1-201ENST00000362295 80 ntBASIC0.71□□□□□ -2.3
ZNF549Q6P9A3 RNU6-161P-201ENST00000363051 106 ntBASIC0.71□□□□□ -2.3
ZNF549Q6P9A3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.71□□□□□ -2.3
ZNF549Q6P9A3 Y_RNA.532-201ENST00000384590 113 ntBASIC0.71□□□□□ -2.3
ZNF549Q6P9A3 MIR519E-201ENST00000385075 84 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms