Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR4777-201ENST00000583710 86 ntBASIC0.25□□□□□ -2.37
PPP4R4Q6NUP7 MIR4439-201ENST00000583746 80 ntBASIC0.25□□□□□ -2.37
PPP4R4Q6NUP7 AC023932.2-201ENST00000603176 175 ntBASIC0.25□□□□□ -2.37
PPP4R4Q6NUP7 AC073869.9-201ENST00000641610 120 ntBASIC0.25□□□□□ -2.37
PPP4R4Q6NUP7 SNORA9.1-201ENST00000362412 131 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 SNORD115-44-201ENST00000365391 82 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 Y_RNA.374-201ENST00000365606 101 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 RNU6-1056P-201ENST00000383996 107 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 Y_RNA.467-201ENST00000384297 102 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 MIR519E-201ENST00000385075 84 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 MIR501-201ENST00000390204 84 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 RNU6-537P-201ENST00000517277 103 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
PPP4R4Q6NUP7 RNU6-106P-201ENST00000384405 107 ntBASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 RNU6-127P-201ENST00000390897 107 ntBASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 Y_RNA.601-201ENST00000410500 113 ntBASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 AL606753.1-201ENST00000427435 87 ntBASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 AC093423.1-201ENST00000440817 142 ntBASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 MIR5706-201ENST00000579841 80 ntBASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 AC012531.4-201ENST00000616509 177 ntBASIC0.23□□□□□ -2.37
PPP4R4Q6NUP7 RNA5SP257-201ENST00000363023 116 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 Y_RNA.283-201ENST00000364798 112 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 SNORA19-201ENST00000384737 128 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 RNA5SP63-201ENST00000391225 112 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 RNU6-554P-201ENST00000410466 106 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 MIR2113-201ENST00000459007 91 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 RNU6-287P-201ENST00000516230 98 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 RNU6-795P-201ENST00000516323 103 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 RNU6-789P-201ENST00000517105 102 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 NAMPTP3-201ENST00000569273 224 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.22□□□□□ -2.37
PPP4R4Q6NUP7 RNU4-36P-201ENST00000364294 144 ntBASIC0.21□□□□□ -2.38
PPP4R4Q6NUP7 MIR617-201ENST00000385030 97 ntBASIC0.21□□□□□ -2.38
PPP4R4Q6NUP7 Y_RNA.648-201ENST00000459455 110 ntBASIC0.21□□□□□ -2.38
PPP4R4Q6NUP7 RNU6-75P-201ENST00000515944 104 ntBASIC0.21□□□□□ -2.38
PPP4R4Q6NUP7 RNU7-129P-201ENST00000516128 62 ntBASIC0.21□□□□□ -2.38
PPP4R4Q6NUP7 AL513043.2-201ENST00000573941 143 ntBASIC0.21□□□□□ -2.38
PPP4R4Q6NUP7 MIR499B-201ENST00000636498 73 ntBASIC0.21□□□□□ -2.38
PPP4R4Q6NUP7 Y_RNA.10-201ENST00000362371 110 ntBASIC0.2□□□□□ -2.38
PPP4R4Q6NUP7 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
PPP4R4Q6NUP7 SNORA51.5-201ENST00000384126 131 ntBASIC0.2□□□□□ -2.38
PPP4R4Q6NUP7 Y_RNA.596-201ENST00000410462 109 ntBASIC0.2□□□□□ -2.38
PPP4R4Q6NUP7 RNU6-509P-201ENST00000363519 107 ntBASIC0.19□□□□□ -2.38
PPP4R4Q6NUP7 Y_RNA.273-201ENST00000364703 102 ntBASIC0.19□□□□□ -2.38
PPP4R4Q6NUP7 RNU6-813P-201ENST00000384691 107 ntBASIC0.19□□□□□ -2.38
PPP4R4Q6NUP7 RNU6-466P-201ENST00000391224 103 ntBASIC0.19□□□□□ -2.38
PPP4R4Q6NUP7 HMGN2P22-201ENST00000427588 175 ntBASIC0.19□□□□□ -2.38
PPP4R4Q6NUP7 Y_RNA.709-201ENST00000516952 92 ntBASIC0.19□□□□□ -2.38
PPP4R4Q6NUP7 AC103810.7-201ENST00000607821 91 ntBASIC0.19□□□□□ -2.38
PPP4R4Q6NUP7 Y_RNA.207-201ENST00000364142 106 ntBASIC0.18□□□□□ -2.38
PPP4R4Q6NUP7 RNU1-141P-201ENST00000364623 158 ntBASIC0.18□□□□□ -2.38
PPP4R4Q6NUP7 MIR590-201ENST00000385008 97 ntBASIC0.18□□□□□ -2.38
PPP4R4Q6NUP7 MIR548H2-201ENST00000408874 88 ntBASIC0.18□□□□□ -2.38
PPP4R4Q6NUP7 RNU7-85P-201ENST00000458851 63 ntBASIC0.18□□□□□ -2.38
PPP4R4Q6NUP7 RNU7-74P-201ENST00000459104 62 ntBASIC0.18□□□□□ -2.38
PPP4R4Q6NUP7 SNORD110-201ENST00000408189 75 ntBASIC0.17□□□□□ -2.38
PPP4R4Q6NUP7 AC006210.1-201ENST00000424882 111 ntBASIC0.17□□□□□ -2.38
PPP4R4Q6NUP7 SCARNA23-201ENST00000516060 130 ntBASIC0.17□□□□□ -2.38
PPP4R4Q6NUP7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.17□□□□□ -2.38
PPP4R4Q6NUP7 MIR4696-201ENST00000581431 70 ntBASIC0.17□□□□□ -2.38
PPP4R4Q6NUP7 MIR548AD-201ENST00000584780 82 ntBASIC0.17□□□□□ -2.38
PPP4R4Q6NUP7 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
PPP4R4Q6NUP7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
PPP4R4Q6NUP7 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
PPP4R4Q6NUP7 MIR1302-5-201ENST00000408164 150 ntBASIC0.15□□□□□ -2.39
PPP4R4Q6NUP7 RNU6-161P-201ENST00000363051 106 ntBASIC0.14□□□□□ -2.39
PPP4R4Q6NUP7 SNORD101-201ENST00000384027 73 ntBASIC0.14□□□□□ -2.39
PPP4R4Q6NUP7 RNU6-644P-201ENST00000391155 98 ntBASIC0.14□□□□□ -2.39
PPP4R4Q6NUP7 MIR4677-201ENST00000584153 80 ntBASIC0.14□□□□□ -2.39
PPP4R4Q6NUP7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.14□□□□□ -2.39
PPP4R4Q6NUP7 RNU6-664P-201ENST00000362381 107 ntBASIC0.13□□□□□ -2.39
PPP4R4Q6NUP7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.13□□□□□ -2.39
PPP4R4Q6NUP7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.13□□□□□ -2.39
PPP4R4Q6NUP7 SNORD114-9-201ENST00000364370 72 ntBASIC0.13□□□□□ -2.39
PPP4R4Q6NUP7 RNY4P18-201ENST00000391107 89 ntBASIC0.13□□□□□ -2.39
PPP4R4Q6NUP7 RNU6-782P-201ENST00000516852 104 ntBASIC0.13□□□□□ -2.39
PPP4R4Q6NUP7 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
PPP4R4Q6NUP7 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
PPP4R4Q6NUP7 MIR643-201ENST00000385267 97 ntBASIC0.12□□□□□ -2.39
PPP4R4Q6NUP7 Y_RNA.629-201ENST00000411368 105 ntBASIC0.11□□□□□ -2.39
PPP4R4Q6NUP7 RNU6-109P-201ENST00000516364 107 ntBASIC0.11□□□□□ -2.39
PPP4R4Q6NUP7 RNU6-184P-201ENST00000516514 107 ntBASIC0.11□□□□□ -2.39
PPP4R4Q6NUP7 MIR3925-201ENST00000584674 77 ntBASIC0.11□□□□□ -2.39
PPP4R4Q6NUP7 U7.6-201ENST00000610841 64 ntBASIC0.11□□□□□ -2.39
PPP4R4Q6NUP7 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
PPP4R4Q6NUP7 RNU6-1325P-201ENST00000364905 105 ntBASIC0.1□□□□□ -2.39
PPP4R4Q6NUP7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.1□□□□□ -2.39
PPP4R4Q6NUP7 MIR2909-201ENST00000617113 69 ntBASIC0.1□□□□□ -2.39
PPP4R4Q6NUP7 AC069503.3-201ENST00000618674 145 ntBASIC0.1□□□□□ -2.39
PPP4R4Q6NUP7 U2.22-201ENST00000636441 106 ntBASIC0.1□□□□□ -2.39
PPP4R4Q6NUP7 RNU6-1290P-201ENST00000362957 109 ntBASIC0.09□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-756P-201ENST00000383997 107 ntBASIC0.09□□□□□ -2.4
PPP4R4Q6NUP7 SNORA25.13-201ENST00000516395 103 ntBASIC0.09□□□□□ -2.4
PPP4R4Q6NUP7 MIR4768-201ENST00000585270 74 ntBASIC0.09□□□□□ -2.4
PPP4R4Q6NUP7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-766P-201ENST00000362478 107 ntBASIC0.08□□□□□ -2.4
PPP4R4Q6NUP7 RNU6-1081P-201ENST00000384537 107 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 233.2 ms