Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 SCARNA23-201ENST00000516060 130 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 AL513043.2-201ENST00000573941 143 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 MIR3920-201ENST00000581751 86 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 AC103810.7-201ENST00000607821 91 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 AL162376.1-201ENST00000624117 175 ntBASIC0.2□□□□□ -2.38
KRT39Q6A163 RNU6-766P-201ENST00000362478 107 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 RNU6-44P-201ENST00000384045 107 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 RNU6-813P-201ENST00000384691 107 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 RNU6-243P-201ENST00000391140 107 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 AL035461.1-201ENST00000421490 332 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.19□□□□□ -2.38
KRT39Q6A163 RNU7-85P-201ENST00000458851 63 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 RNU6-75P-201ENST00000515944 104 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 RNU6-919P-201ENST00000516731 104 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 MIR548AI-201ENST00000579940 88 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 MIR4439-201ENST00000583746 80 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 SNORA70.25-201ENST00000612741 95 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 AC067863.3-201ENST00000624172 122 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 MIR924-201ENST00000638017 53 ntBASIC0.19□□□□□ -2.38
KRT39Q6A163 Y_RNA.10-201ENST00000362371 110 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 RNU6-1125P-201ENST00000363601 107 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 Y_RNA.283-201ENST00000364798 112 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 RNU6-480P-201ENST00000384332 107 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 RNU6-269P-201ENST00000391077 97 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 RNU6-644P-201ENST00000391155 98 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 MIR1197-201ENST00000408818 88 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 RNU7-61P-201ENST00000515897 61 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 RNU7-13P-201ENST00000516413 62 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 MTRNR2L2-201ENST00000604882 87 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
KRT39Q6A163 Y_RNA.107-201ENST00000363190 121 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 RNU6-147P-201ENST00000383983 107 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 MIR548L-201ENST00000408303 86 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 AL031737.1-201ENST00000450125 223 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 RNA5SP484-201ENST00000458857 111 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 Y_RNA.648-201ENST00000459455 110 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 RNU6-1232P-201ENST00000516299 86 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 Y_RNA.818-201ENST00000618813 71 ntBASIC0.17□□□□□ -2.38
KRT39Q6A163 Y_RNA.258-201ENST00000364613 105 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 Y_RNA.423-201ENST00000384057 113 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 MIR519E-201ENST00000385075 84 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 RNU6-466P-201ENST00000391224 103 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 RNU6-887P-201ENST00000410660 100 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 MIR2113-201ENST00000459007 91 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 RNU6-162P-201ENST00000516228 103 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 RNU6-287P-201ENST00000516230 98 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 Y_RNA.705-201ENST00000516862 110 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 MIR8087-201ENST00000612745 78 ntBASIC0.16□□□□□ -2.38
KRT39Q6A163 Y_RNA.93-201ENST00000363066 109 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 Y_RNA.115-201ENST00000363272 98 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 Y_RNA.207-201ENST00000364142 106 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 RNU6-132P-201ENST00000383863 107 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 RNU6-1113P-201ENST00000384348 107 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 Y_RNA.596-201ENST00000410462 109 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 AC093423.1-201ENST00000440817 142 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 RNU6-158P-201ENST00000517104 100 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 MIR4696-201ENST00000581431 70 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 U7.3-201ENST00000616123 62 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
KRT39Q6A163 MIRLET7F1-201ENST00000362202 87 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 RNU6-640P-201ENST00000363693 105 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 Y_RNA.290-201ENST00000364879 114 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 SNORD115-44-201ENST00000365391 82 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 Y_RNA.348-201ENST00000365403 103 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 SNORD58A-201ENST00000383875 65 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 SNORA2A-201ENST00000383885 135 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 SNORD101-201ENST00000384027 73 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 Y_RNA.544-201ENST00000384650 113 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 MIR617-201ENST00000385030 97 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 MIR501-201ENST00000390204 84 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 MIR760-201ENST00000390220 80 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 RNU6-972P-201ENST00000391208 107 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 MTATP8P2-201ENST00000435212 202 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 SNORD4B-201ENST00000459083 72 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 NAMPTP3-201ENST00000569273 224 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 AP001318.4-201ENST00000616637 121 ntBASIC0.14□□□□□ -2.39
KRT39Q6A163 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.14□□□□□ -2.39
KRT39Q6A163 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
KRT39Q6A163 RNU6-664P-201ENST00000362381 107 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 RNU1-141P-201ENST00000364623 158 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 MIR488-201ENST00000365739 83 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 RNU6-905P-201ENST00000384434 107 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 Y_RNA.495-201ENST00000384435 112 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 HMGN2P22-201ENST00000427588 175 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 AC026421.1-201ENST00000519101 163 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.13□□□□□ -2.39
KRT39Q6A163 Y_RNA.190-201ENST00000363964 101 ntBASIC0.12□□□□□ -2.39
KRT39Q6A163 RNU6-153P-201ENST00000364422 104 ntBASIC0.12□□□□□ -2.39
KRT39Q6A163 RNA5SP128-201ENST00000365305 116 ntBASIC0.12□□□□□ -2.39
KRT39Q6A163 RNU6-32P-201ENST00000383948 107 ntBASIC0.12□□□□□ -2.39
KRT39Q6A163 RNU6-13P-201ENST00000384248 107 ntBASIC0.12□□□□□ -2.39
KRT39Q6A163 RNU6-12P-201ENST00000384604 107 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 230.8 ms