Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
CREB3L3Q68CJ9 RNU6-811P-201ENST00000384069 107 ntBASIC0.76□□□□□ -2.29
CREB3L3Q68CJ9 AC026421.1-201ENST00000519101 163 ntBASIC0.76□□□□□ -2.29
CREB3L3Q68CJ9 MIR216B-201ENST00000390186 82 ntBASIC0.75□□□□□ -2.29
CREB3L3Q68CJ9 RNY1P8-201ENST00000383970 114 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 SNORA8.2-201ENST00000384372 139 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 Y_RNA.558-201ENST00000384685 113 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 SNORA40.8-201ENST00000411034 126 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 RNU7-85P-201ENST00000458851 63 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 RNA5SP480-201ENST00000516840 109 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 MIR5582-201ENST00000579697 68 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 U6.100-201ENST00000636230 99 ntBASIC0.74□□□□□ -2.29
CREB3L3Q68CJ9 RNU6-664P-201ENST00000362381 107 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 RNU6-509P-201ENST00000363519 107 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 RNU6-716P-201ENST00000365621 103 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 SNORD41.1-201ENST00000391000 69 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 MIR1236-201ENST00000408340 102 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 RNU6-935P-201ENST00000410371 100 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 AC018659.1-201ENST00000551083 169 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 MIR4668-201ENST00000582284 70 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.73□□□□□ -2.29
CREB3L3Q68CJ9 Y_RNA.43-201ENST00000362670 111 ntBASIC0.72□□□□□ -2.29
CREB3L3Q68CJ9 RNU6-726P-201ENST00000364680 107 ntBASIC0.72□□□□□ -2.29
CREB3L3Q68CJ9 RNY1P7-201ENST00000384743 110 ntBASIC0.72□□□□□ -2.29
CREB3L3Q68CJ9 AC006254.2-201ENST00000603259 279 ntBASIC0.72□□□□□ -2.29
CREB3L3Q68CJ9 RNU4-32P-201ENST00000363404 141 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 SNORD115-37-201ENST00000363768 82 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 RNA5SP517-201ENST00000364724 117 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-294P-201ENST00000364999 102 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-75P-201ENST00000515944 104 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 RNA5SP121-201ENST00000516537 101 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 MIR3920-201ENST00000581751 86 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 AC104996.3-201ENST00000590718 94 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 MIR6515-201ENST00000619843 57 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 AC073869.9-201ENST00000641610 120 ntBASIC0.71□□□□□ -2.3
CREB3L3Q68CJ9 SNORA36.1-201ENST00000363424 132 ntBASIC0.7□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.7□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-49P-201ENST00000384256 107 ntBASIC0.7□□□□□ -2.3
CREB3L3Q68CJ9 RNY1P4-201ENST00000384595 115 ntBASIC0.7□□□□□ -2.3
CREB3L3Q68CJ9 MIR617-201ENST00000385030 97 ntBASIC0.7□□□□□ -2.3
CREB3L3Q68CJ9 RN7SKP12-201ENST00000516275 143 ntBASIC0.7□□□□□ -2.3
CREB3L3Q68CJ9 MIR4696-201ENST00000581431 70 ntBASIC0.7□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-1298P-201ENST00000362456 101 ntBASIC0.69□□□□□ -2.3
CREB3L3Q68CJ9 RNY4P3-201ENST00000365254 95 ntBASIC0.69□□□□□ -2.3
CREB3L3Q68CJ9 MIR519C-201ENST00000385053 87 ntBASIC0.69□□□□□ -2.3
CREB3L3Q68CJ9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.69□□□□□ -2.3
CREB3L3Q68CJ9 MIR2113-201ENST00000459007 91 ntBASIC0.69□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-287P-201ENST00000516230 98 ntBASIC0.69□□□□□ -2.3
CREB3L3Q68CJ9 AC022709.1-201ENST00000615967 87 ntBASIC0.69□□□□□ -2.3
CREB3L3Q68CJ9 Y_RNA.207-201ENST00000364142 106 ntBASIC0.68□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
CREB3L3Q68CJ9 Y_RNA.491-201ENST00000384417 107 ntBASIC0.68□□□□□ -2.3
CREB3L3Q68CJ9 MIR3064-201ENST00000581130 66 ntBASIC0.68□□□□□ -2.3
CREB3L3Q68CJ9 MIR7107-201ENST00000611489 80 ntBASIC0.68□□□□□ -2.3
CREB3L3Q68CJ9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
CREB3L3Q68CJ9 SNORD118-201ENST00000363593 134 ntBASIC0.67□□□□□ -2.3
CREB3L3Q68CJ9 RNA5SP325-201ENST00000363756 130 ntBASIC0.67□□□□□ -2.3
CREB3L3Q68CJ9 MIR518A1-201ENST00000385068 85 ntBASIC0.67□□□□□ -2.3
CREB3L3Q68CJ9 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
CREB3L3Q68CJ9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CREB3L3Q68CJ9 Y_RNA.620-201ENST00000411009 88 ntBASIC0.67□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-863P-201ENST00000515989 104 ntBASIC0.67□□□□□ -2.3
CREB3L3Q68CJ9 MIRLET7F1-201ENST00000362202 87 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-633P-201ENST00000362612 103 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 RNU6-1255P-201ENST00000363434 112 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 SNORA25.18-201ENST00000607153 114 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 IGLL4P-201ENST00000614590 133 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 MIR6779-201ENST00000617283 64 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 AL162376.1-201ENST00000624117 175 ntBASIC0.66□□□□□ -2.3
CREB3L3Q68CJ9 U3.27-201ENST00000391237 200 ntBASIC0.65□□□□□ -2.31
CREB3L3Q68CJ9 RNU6-402P-201ENST00000410678 103 ntBASIC0.65□□□□□ -2.31
CREB3L3Q68CJ9 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
CREB3L3Q68CJ9 Y_RNA.17-201ENST00000362433 111 ntBASIC0.64□□□□□ -2.31
CREB3L3Q68CJ9 RNU2-59P-201ENST00000410482 191 ntBASIC0.64□□□□□ -2.31
CREB3L3Q68CJ9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.64□□□□□ -2.31
CREB3L3Q68CJ9 SNORD114-26-201ENST00000363543 72 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 RNY1P1-201ENST00000364372 112 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 RNU6-675P-201ENST00000384236 104 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 MIR598-201ENST00000384868 97 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 MIR451A-201ENST00000385059 72 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 U7.6-201ENST00000610841 64 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
CREB3L3Q68CJ9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.62□□□□□ -2.31
CREB3L3Q68CJ9 RNU6-132P-201ENST00000383863 107 ntBASIC0.62□□□□□ -2.31
CREB3L3Q68CJ9 MIR450A2-201ENST00000385022 100 ntBASIC0.62□□□□□ -2.31
CREB3L3Q68CJ9 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
CREB3L3Q68CJ9 MIR4796-201ENST00000580742 81 ntBASIC0.62□□□□□ -2.31
CREB3L3Q68CJ9 RNU5F-1-201ENST00000362507 117 ntBASIC0.61□□□□□ -2.31
CREB3L3Q68CJ9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.61□□□□□ -2.31
CREB3L3Q68CJ9 RNU6-219P-201ENST00000364728 107 ntBASIC0.61□□□□□ -2.31
CREB3L3Q68CJ9 MIR519E-201ENST00000385075 84 ntBASIC0.61□□□□□ -2.31
CREB3L3Q68CJ9 RNU6-269P-201ENST00000391077 97 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms