Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.47□□□□□ -2.01
VARS2Q5ST30 SNORA9.1-201ENST00000362412 131 ntBASIC2.47□□□□□ -2.01
VARS2Q5ST30 SNORA6-201ENST00000384033 151 ntBASIC2.47□□□□□ -2.01
VARS2Q5ST30 SNORA31.25-201ENST00000517242 134 ntBASIC2.47□□□□□ -2.01
VARS2Q5ST30 MIR5007-201ENST00000583098 95 ntBASIC2.47□□□□□ -2.01
VARS2Q5ST30 MIR6873-201ENST00000622788 63 ntBASIC2.47□□□□□ -2.01
VARS2Q5ST30 RNU6-810P-201ENST00000364001 107 ntBASIC2.46□□□□□ -2.02
VARS2Q5ST30 RNU6-696P-201ENST00000390834 107 ntBASIC2.46□□□□□ -2.02
VARS2Q5ST30 RNA5SP181-201ENST00000410246 98 ntBASIC2.46□□□□□ -2.02
VARS2Q5ST30 MIR4804-201ENST00000581683 73 ntBASIC2.46□□□□□ -2.02
VARS2Q5ST30 AL359821.1-201ENST00000605519 182 ntBASIC2.46□□□□□ -2.02
VARS2Q5ST30 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
VARS2Q5ST30 MIR144-201ENST00000384886 86 ntBASIC2.45□□□□□ -2.02
VARS2Q5ST30 SNORD111-201ENST00000408139 94 ntBASIC2.45□□□□□ -2.02
VARS2Q5ST30 MIR4529-201ENST00000578110 78 ntBASIC2.45□□□□□ -2.02
VARS2Q5ST30 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.45□□□□□ -2.02
VARS2Q5ST30 MIR21-201ENST00000362134 72 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 RNU6-986P-201ENST00000363133 102 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 SNORD41.1-201ENST00000391000 69 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 RNU7-56P-201ENST00000458744 62 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 RNU6-1053P-201ENST00000515930 101 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 SNORA31.2-201ENST00000516019 134 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 RNU6-419P-201ENST00000517030 63 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 MIR6895-201ENST00000613497 78 ntBASIC2.44□□□□□ -2.02
VARS2Q5ST30 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VARS2Q5ST30 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VARS2Q5ST30 SNORA25.8-201ENST00000364831 128 ntBASIC2.43□□□□□ -2.02
VARS2Q5ST30 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
VARS2Q5ST30 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
VARS2Q5ST30 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
VARS2Q5ST30 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
VARS2Q5ST30 RNU1-119P-201ENST00000391122 165 ntBASIC2.42□□□□□ -2.02
VARS2Q5ST30 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.42□□□□□ -2.02
VARS2Q5ST30 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VARS2Q5ST30 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VARS2Q5ST30 Y_RNA.74-201ENST00000362911 99 ntBASIC2.41□□□□□ -2.02
VARS2Q5ST30 MIR221-201ENST00000385135 110 ntBASIC2.41□□□□□ -2.02
VARS2Q5ST30 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VARS2Q5ST30 MIR4498-201ENST00000577599 66 ntBASIC2.41□□□□□ -2.02
VARS2Q5ST30 MIR6766-201ENST00000622641 72 ntBASIC2.41□□□□□ -2.02
VARS2Q5ST30 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VARS2Q5ST30 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.02
VARS2Q5ST30 Y_RNA.118-201ENST00000363300 101 ntBASIC2.4□□□□□ -2.03
VARS2Q5ST30 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
VARS2Q5ST30 RNU6-165P-201ENST00000517170 99 ntBASIC2.4□□□□□ -2.03
VARS2Q5ST30 MIR4781-201ENST00000585250 76 ntBASIC2.4□□□□□ -2.03
VARS2Q5ST30 MIR758-201ENST00000390227 88 ntBASIC2.39□□□□□ -2.03
VARS2Q5ST30 RNU6-269P-201ENST00000391077 97 ntBASIC2.39□□□□□ -2.03
VARS2Q5ST30 SNORA75.2-201ENST00000391138 150 ntBASIC2.39□□□□□ -2.03
VARS2Q5ST30 SNORA75.3-201ENST00000391231 150 ntBASIC2.39□□□□□ -2.03
VARS2Q5ST30 MIR4490-201ENST00000582647 84 ntBASIC2.39□□□□□ -2.03
VARS2Q5ST30 AL157834.3-201ENST00000615543 103 ntBASIC2.39□□□□□ -2.03
VARS2Q5ST30 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
VARS2Q5ST30 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VARS2Q5ST30 RNU1-141P-201ENST00000364623 158 ntBASIC2.38□□□□□ -2.03
VARS2Q5ST30 Y_RNA.282-201ENST00000364793 102 ntBASIC2.38□□□□□ -2.03
VARS2Q5ST30 SNORA63.6-201ENST00000364921 119 ntBASIC2.38□□□□□ -2.03
VARS2Q5ST30 MIR517C-201ENST00000385103 95 ntBASIC2.38□□□□□ -2.03
VARS2Q5ST30 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
VARS2Q5ST30 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
VARS2Q5ST30 SNORA64-201ENST00000384674 134 ntBASIC2.37□□□□□ -2.03
VARS2Q5ST30 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VARS2Q5ST30 RNU5B-6P-201ENST00000516765 68 ntBASIC2.37□□□□□ -2.03
VARS2Q5ST30 RNU6-295P-201ENST00000516901 104 ntBASIC2.37□□□□□ -2.03
VARS2Q5ST30 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.37□□□□□ -2.03
VARS2Q5ST30 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
VARS2Q5ST30 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
VARS2Q5ST30 RNA5SP212-201ENST00000391223 107 ntBASIC2.36□□□□□ -2.03
VARS2Q5ST30 RNU6-172P-201ENST00000411000 93 ntBASIC2.36□□□□□ -2.03
VARS2Q5ST30 RNU7-193P-201ENST00000516723 65 ntBASIC2.36□□□□□ -2.03
VARS2Q5ST30 AC023827.1-201ENST00000569247 97 ntBASIC2.36□□□□□ -2.03
VARS2Q5ST30 AL136317.1-201ENST00000612653 226 ntBASIC2.36□□□□□ -2.03
VARS2Q5ST30 AL773524.1-201ENST00000614065 229 ntBASIC2.36□□□□□ -2.03
VARS2Q5ST30 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VARS2Q5ST30 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
VARS2Q5ST30 SNORA26.9-201ENST00000391322 122 ntBASIC2.35□□□□□ -2.03
VARS2Q5ST30 AL021921.1-201ENST00000442774 93 ntBASIC2.35□□□□□ -2.03
VARS2Q5ST30 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VARS2Q5ST30 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VARS2Q5ST30 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VARS2Q5ST30 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VARS2Q5ST30 RNU6-924P-201ENST00000362926 108 ntBASIC2.34□□□□□ -2.03
VARS2Q5ST30 SNORD1B-201ENST00000363091 84 ntBASIC2.34□□□□□ -2.03
VARS2Q5ST30 MIR527-201ENST00000385244 85 ntBASIC2.34□□□□□ -2.03
VARS2Q5ST30 RNA5SP200-201ENST00000516360 103 ntBASIC2.34□□□□□ -2.03
VARS2Q5ST30 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.34□□□□□ -2.03
VARS2Q5ST30 MIR6840-201ENST00000611937 71 ntBASIC2.34□□□□□ -2.03
VARS2Q5ST30 MIR8074-201ENST00000615081 81 ntBASIC2.34□□□□□ -2.03
VARS2Q5ST30 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.03
VARS2Q5ST30 MIR302D-201ENST00000362275 68 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 RNU1-17P-201ENST00000363022 152 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 RNU6-246P-201ENST00000384702 107 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 SNORD28-201ENST00000384706 75 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 CYP3A54P-201ENST00000566950 75 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 MIR548AL-201ENST00000578416 97 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 MIR8063-201ENST00000621930 81 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 MIR6132-201ENST00000622083 109 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 MIR219B-201ENST00000637023 88 ntBASIC2.33□□□□□ -2.04
VARS2Q5ST30 SNORA7.1-201ENST00000363750 139 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms