Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 MIR6788-201ENST00000618842 66 ntBASIC0.9□□□□□ -2.27
ZNF394Q53GI3 SNORA36.1-201ENST00000363424 132 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 SNORA8.2-201ENST00000384372 139 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 MIR1236-201ENST00000408340 102 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 Y_RNA.620-201ENST00000411009 88 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 MIR4696-201ENST00000581431 70 ntBASIC0.89□□□□□ -2.27
ZNF394Q53GI3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ZNF394Q53GI3 RNU6-633P-201ENST00000362612 103 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 SNORD71-201ENST00000411292 86 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 AC104996.3-201ENST00000590718 94 ntBASIC0.88□□□□□ -2.27
ZNF394Q53GI3 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNU6-675P-201ENST00000384236 104 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNY1P4-201ENST00000384595 115 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 MIR617-201ENST00000385030 97 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 MIR216B-201ENST00000390186 82 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNU6-935P-201ENST00000410371 100 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.87□□□□□ -2.27
ZNF394Q53GI3 RNA5SP517-201ENST00000364724 117 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 SNORA40.8-201ENST00000411034 126 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 RNU6-287P-201ENST00000516230 98 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 AC018659.1-201ENST00000551083 169 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 MIR3064-201ENST00000581130 66 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 MIR6515-201ENST00000619843 57 ntBASIC0.86□□□□□ -2.27
ZNF394Q53GI3 Y_RNA.17-201ENST00000362433 111 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 Y_RNA.207-201ENST00000364142 106 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 RNU6-219P-201ENST00000364728 107 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 RNU6-716P-201ENST00000365621 103 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 MIR519C-201ENST00000385053 87 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 MIR548J-201ENST00000408833 112 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 RNU6-402P-201ENST00000410678 103 ntBASIC0.85□□□□□ -2.27
ZNF394Q53GI3 RNU4-32P-201ENST00000363404 141 ntBASIC0.84□□□□□ -2.27
ZNF394Q53GI3 Y_RNA.491-201ENST00000384417 107 ntBASIC0.84□□□□□ -2.27
ZNF394Q53GI3 MIR2113-201ENST00000459007 91 ntBASIC0.84□□□□□ -2.27
ZNF394Q53GI3 RN7SKP12-201ENST00000516275 143 ntBASIC0.84□□□□□ -2.27
ZNF394Q53GI3 RNU6-509P-201ENST00000363519 107 ntBASIC0.83□□□□□ -2.28
ZNF394Q53GI3 MIR7107-201ENST00000611489 80 ntBASIC0.83□□□□□ -2.28
ZNF394Q53GI3 AC022709.1-201ENST00000615967 87 ntBASIC0.83□□□□□ -2.28
ZNF394Q53GI3 AL162376.1-201ENST00000624117 175 ntBASIC0.83□□□□□ -2.28
ZNF394Q53GI3 MIRLET7F1-201ENST00000362202 87 ntBASIC0.82□□□□□ -2.28
ZNF394Q53GI3 SNORD118-201ENST00000363593 134 ntBASIC0.82□□□□□ -2.28
ZNF394Q53GI3 RNU6-132P-201ENST00000383863 107 ntBASIC0.82□□□□□ -2.28
ZNF394Q53GI3 AC073869.9-201ENST00000641610 120 ntBASIC0.82□□□□□ -2.28
ZNF394Q53GI3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
ZNF394Q53GI3 SNORD115-37-201ENST00000363768 82 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 MIR450A2-201ENST00000385022 100 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 U3.27-201ENST00000391237 200 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 Y_RNA.593-201ENST00000410292 98 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 IGLL4P-201ENST00000614590 133 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
ZNF394Q53GI3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
ZNF394Q53GI3 MIR518A1-201ENST00000385068 85 ntBASIC0.8□□□□□ -2.28
ZNF394Q53GI3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ZNF394Q53GI3 RNY4P3-201ENST00000365254 95 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 RNU6-497P-201ENST00000365316 104 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 RNU6-863P-201ENST00000515989 104 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 RNA5SP121-201ENST00000516537 101 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 MIR5000-201ENST00000577717 103 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 MIR548AG2-201ENST00000581228 64 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.79□□□□□ -2.28
ZNF394Q53GI3 RNY1P1-201ENST00000364372 112 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 RNU6-945P-201ENST00000383947 107 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 MIR598-201ENST00000384868 97 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 MIR519E-201ENST00000385075 84 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 SNORA18.5-201ENST00000516616 101 ntBASIC0.78□□□□□ -2.28
ZNF394Q53GI3 RNA5SP292-201ENST00000390974 118 ntBASIC0.77□□□□□ -2.29
ZNF394Q53GI3 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
ZNF394Q53GI3 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
ZNF394Q53GI3 RNU6-820P-201ENST00000384273 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 MIR451A-201ENST00000385059 72 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
ZNF394Q53GI3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU2-59P-201ENST00000410482 191 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU6-848P-201ENST00000515948 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU6-617P-201ENST00000516147 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU6-473P-201ENST00000516164 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 MIR4796-201ENST00000580742 81 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 SNORA25.18-201ENST00000607153 114 ntBASIC0.76□□□□□ -2.29
ZNF394Q53GI3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.76□□□□□ -2.29
ZNF394Q53GI3 SNORD115-27-201ENST00000364430 82 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 RNU6-269P-201ENST00000391077 97 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 AC093729.1-201ENST00000513074 128 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 RNU4-54P-201ENST00000516428 129 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 RNU6-267P-201ENST00000516714 103 ntBASIC0.75□□□□□ -2.29
ZNF394Q53GI3 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
ZNF394Q53GI3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
ZNF394Q53GI3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.74□□□□□ -2.29
ZNF394Q53GI3 MIR548BB-201ENST00000626714 66 ntBASIC0.74□□□□□ -2.29
ZNF394Q53GI3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
ZNF394Q53GI3 SNORA63.2-201ENST00000362603 126 ntBASIC0.73□□□□□ -2.29
ZNF394Q53GI3 MIR1302-4-201ENST00000408701 150 ntBASIC0.73□□□□□ -2.29
ZNF394Q53GI3 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.73□□□□□ -2.29
ZNF394Q53GI3 MIR5706-201ENST00000579841 80 ntBASIC0.73□□□□□ -2.29
ZNF394Q53GI3 AC093423.1-201ENST00000440817 142 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 284.4 ms