Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 SNORD36A-201ENST00000362874 73 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 RNU6-832P-201ENST00000363319 107 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 RNA5SP128-201ENST00000365305 116 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 Y_RNA.353-201ENST00000365440 108 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 MIR181B2-201ENST00000385004 89 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 SNORD41.1-201ENST00000391000 69 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 AC006210.1-201ENST00000424882 111 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 RNA5SP484-201ENST00000458857 111 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 MIR4694-201ENST00000578534 80 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 MIR3613-201ENST00000579844 87 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 RNU1-29P-201ENST00000606574 126 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 TRDV1-202ENST00000621643 102 ntBASIC0.14□□□□□ -2.39
PDLIM3Q53GG5 RNU6-957P-201ENST00000363652 99 ntBASIC0.13□□□□□ -2.39
PDLIM3Q53GG5 RNU6-1163P-201ENST00000364516 107 ntBASIC0.13□□□□□ -2.39
PDLIM3Q53GG5 RNU6-46P-201ENST00000383860 107 ntBASIC0.13□□□□□ -2.39
PDLIM3Q53GG5 RNU6-127P-201ENST00000390897 107 ntBASIC0.13□□□□□ -2.39
PDLIM3Q53GG5 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
PDLIM3Q53GG5 AC008267.6-201ENST00000441664 139 ntBASIC0.13□□□□□ -2.39
PDLIM3Q53GG5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.13□□□□□ -2.39
PDLIM3Q53GG5 AC141557.1-201ENST00000540982 400 ntBASIC0.13□□□□□ -2.39
PDLIM3Q53GG5 MIR101-1-201ENST00000362265 75 ntBASIC0.12□□□□□ -2.39
PDLIM3Q53GG5 RNY3P2-201ENST00000362918 102 ntBASIC0.12□□□□□ -2.39
PDLIM3Q53GG5 SNORD110-201ENST00000408189 75 ntBASIC0.12□□□□□ -2.39
PDLIM3Q53GG5 RPS29P8-201ENST00000445109 171 ntBASIC0.12□□□□□ -2.39
PDLIM3Q53GG5 AC104408.1-201ENST00000605241 170 ntBASIC0.12□□□□□ -2.39
PDLIM3Q53GG5 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
PDLIM3Q53GG5 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
PDLIM3Q53GG5 RNU6-509P-201ENST00000363519 107 ntBASIC0.11□□□□□ -2.39
PDLIM3Q53GG5 RNU6-880P-201ENST00000384526 107 ntBASIC0.11□□□□□ -2.39
PDLIM3Q53GG5 RNY1P9-201ENST00000532431 109 ntBASIC0.11□□□□□ -2.39
PDLIM3Q53GG5 U6.100-201ENST00000636230 99 ntBASIC0.11□□□□□ -2.39
PDLIM3Q53GG5 SNORD114-5-201ENST00000362928 70 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 Y_RNA.78-201ENST00000362970 110 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 RNU6-1125P-201ENST00000363601 107 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 SNORD49B-201ENST00000365172 72 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 RNU6-302P-201ENST00000365249 107 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 RNU6-81P-201ENST00000365608 104 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 RNU6V-201ENST00000384105 107 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 SNORA51.5-201ENST00000384126 131 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 RNU6-480P-201ENST00000384332 107 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 MIR593-201ENST00000384856 100 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 MIR5706-201ENST00000579841 80 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 MIR548AG2-201ENST00000581228 64 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 AC073869.9-201ENST00000641610 120 ntBASIC0.1□□□□□ -2.39
PDLIM3Q53GG5 RNU6-1107P-201ENST00000364817 104 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.377-201ENST00000365644 108 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1014P-201ENST00000383940 103 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 RNU6-466P-201ENST00000391224 103 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 RNU6-287P-201ENST00000516230 98 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 RNU6-795P-201ENST00000516323 103 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 MIR3910-1-201ENST00000580936 111 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 MIR6129-201ENST00000616087 109 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 AC025521.1-201ENST00000621624 286 ntBASIC0.09□□□□□ -2.4
PDLIM3Q53GG5 MIR501-201ENST00000390204 84 ntBASIC0.08□□□□□ -2.4
PDLIM3Q53GG5 SNORA19.1-201ENST00000410656 129 ntBASIC0.08□□□□□ -2.4
PDLIM3Q53GG5 RNU7-74P-201ENST00000459104 62 ntBASIC0.08□□□□□ -2.4
PDLIM3Q53GG5 RNU6-412P-201ENST00000516434 106 ntBASIC0.08□□□□□ -2.4
PDLIM3Q53GG5 RNU6-62P-201ENST00000516526 102 ntBASIC0.08□□□□□ -2.4
PDLIM3Q53GG5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.08□□□□□ -2.4
PDLIM3Q53GG5 MIR4473-201ENST00000583731 91 ntBASIC0.08□□□□□ -2.4
PDLIM3Q53GG5 MIR548Z-201ENST00000584743 97 ntBASIC0.08□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1244P-201ENST00000363614 108 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 RNU4-36P-201ENST00000364294 144 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 SNORD45B-201ENST00000364617 72 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.467-201ENST00000384297 102 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 RNU6-22P-201ENST00000384355 107 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1117P-201ENST00000384525 104 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 RNU6-476P-201ENST00000384726 107 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 MIR519E-201ENST00000385075 84 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1154P-201ENST00000391001 104 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1064P-201ENST00000410626 104 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 MIR2113-201ENST00000459007 91 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 MIR4645-201ENST00000583158 77 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 AC132825.6-201ENST00000638861 357 ntBASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.07□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.281-201ENST00000364774 94 ntBASIC0.06□□□□□ -2.4
PDLIM3Q53GG5 SNORD115-44-201ENST00000365391 82 ntBASIC0.06□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1184P-201ENST00000384588 108 ntBASIC0.06□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.563-201ENST00000384707 108 ntBASIC0.06□□□□□ -2.4
PDLIM3Q53GG5 MIR610-201ENST00000385139 96 ntBASIC0.06□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.596-201ENST00000410462 109 ntBASIC0.06□□□□□ -2.4
PDLIM3Q53GG5 HMGN2P22-201ENST00000427588 175 ntBASIC0.06□□□□□ -2.4
PDLIM3Q53GG5 uc_338.28-201ENST00000612082 187 ntBASIC0.06□□□□□ -2.4
PDLIM3Q53GG5 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
PDLIM3Q53GG5 RNU1-141P-201ENST00000364623 158 ntBASIC0.05□□□□□ -2.4
PDLIM3Q53GG5 RNU6-1144P-201ENST00000384247 104 ntBASIC0.05□□□□□ -2.4
PDLIM3Q53GG5 MIR617-201ENST00000385030 97 ntBASIC0.05□□□□□ -2.4
PDLIM3Q53GG5 MIR4460-201ENST00000577862 86 ntBASIC0.05□□□□□ -2.4
PDLIM3Q53GG5 AC103810.7-201ENST00000607821 91 ntBASIC0.05□□□□□ -2.4
PDLIM3Q53GG5 U7.6-201ENST00000610841 64 ntBASIC0.05□□□□□ -2.4
PDLIM3Q53GG5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.05□□□□□ -2.4
PDLIM3Q53GG5 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.95-201ENST00000363079 95 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.207-201ENST00000364142 106 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 Y_RNA.283-201ENST00000364798 112 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 MIR224-201ENST00000384889 81 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 AL603908.1-201ENST00000406098 201 ntBASIC0.04□□□□□ -2.4
PDLIM3Q53GG5 RNU6-848P-201ENST00000515948 107 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 266.2 ms