Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 Y_RNA.607-201ENST00000410597 98 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 AL450471.1-201ENST00000447509 127 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.648-201ENST00000459455 110 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 CYP3A137P-201ENST00000562436 69 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-132P-201ENST00000383863 107 ntBASIC1.03□□□□□ -2.24
SLC44A4Q53GD3 MIR3973-201ENST00000579824 107 ntBASIC1.03□□□□□ -2.24
SLC44A4Q53GD3 MIR4536-1-201ENST00000583537 88 ntBASIC1.03□□□□□ -2.24
SLC44A4Q53GD3 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 RNU6-24P-201ENST00000384440 107 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 Y_RNA.532-201ENST00000384590 113 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 MIR519C-201ENST00000385053 87 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 MIR520H-201ENST00000385126 88 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 AL606490.4-201ENST00000423117 127 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 Y_RNA.809-201ENST00000516058 95 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 RN7SL793P-201ENST00000583259 296 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 RNU7-10P-201ENST00000607194 63 ntBASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.02□□□□□ -2.25
SLC44A4Q53GD3 Y_RNA.283-201ENST00000364798 112 ntBASIC1.01□□□□□ -2.25
SLC44A4Q53GD3 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
SLC44A4Q53GD3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SLC44A4Q53GD3 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
SLC44A4Q53GD3 AC093729.1-201ENST00000513074 128 ntBASIC1.01□□□□□ -2.25
SLC44A4Q53GD3 SNORA25.13-201ENST00000516395 103 ntBASIC1.01□□□□□ -2.25
SLC44A4Q53GD3 AL136317.1-201ENST00000612653 226 ntBASIC1.01□□□□□ -2.25
SLC44A4Q53GD3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SLC44A4Q53GD3 RNU6-776P-201ENST00000364403 104 ntBASIC1□□□□□ -2.25
SLC44A4Q53GD3 RNU6-1022P-201ENST00000365049 104 ntBASIC1□□□□□ -2.25
SLC44A4Q53GD3 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
SLC44A4Q53GD3 RNU6-523P-201ENST00000516304 54 ntBASIC1□□□□□ -2.25
SLC44A4Q53GD3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1□□□□□ -2.25
SLC44A4Q53GD3 RNU6-624P-201ENST00000363411 107 ntBASIC0.99□□□□□ -2.25
SLC44A4Q53GD3 MIR216A-201ENST00000385063 110 ntBASIC0.99□□□□□ -2.25
SLC44A4Q53GD3 MIR599-201ENST00000385069 95 ntBASIC0.99□□□□□ -2.25
SLC44A4Q53GD3 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
SLC44A4Q53GD3 SNORA31.14-201ENST00000516728 116 ntBASIC0.99□□□□□ -2.25
SLC44A4Q53GD3 AC138907.6-201ENST00000568401 126 ntBASIC0.99□□□□□ -2.25
SLC44A4Q53GD3 AC138869.1-201ENST00000568623 124 ntBASIC0.99□□□□□ -2.25
SLC44A4Q53GD3 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
SLC44A4Q53GD3 MIRLET7F1-201ENST00000362202 87 ntBASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 MIR519A1-201ENST00000385257 85 ntBASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 RNU6-466P-201ENST00000391224 103 ntBASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 MIR1236-201ENST00000408340 102 ntBASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 SCARNA18B-201ENST00000458806 135 ntBASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 TRDV1-202ENST00000621643 102 ntBASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SLC44A4Q53GD3 RNU6-1296P-201ENST00000383879 107 ntBASIC0.97□□□□□ -2.25
SLC44A4Q53GD3 AC097635.1-201ENST00000450678 155 ntBASIC0.97□□□□□ -2.25
SLC44A4Q53GD3 MIR3064-201ENST00000581130 66 ntBASIC0.97□□□□□ -2.25
SLC44A4Q53GD3 uc_338.16-201ENST00000621804 95 ntBASIC0.97□□□□□ -2.25
SLC44A4Q53GD3 snoU13.17-201ENST00000458802 104 ntBASIC0.96□□□□□ -2.26
SLC44A4Q53GD3 MIR2113-201ENST00000459007 91 ntBASIC0.96□□□□□ -2.26
SLC44A4Q53GD3 SNORA18.5-201ENST00000516616 101 ntBASIC0.96□□□□□ -2.26
SLC44A4Q53GD3 AC011195.1-201ENST00000578177 177 ntBASIC0.96□□□□□ -2.26
SLC44A4Q53GD3 MIR4796-201ENST00000580742 81 ntBASIC0.96□□□□□ -2.26
SLC44A4Q53GD3 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
SLC44A4Q53GD3 AL353765.1-201ENST00000605514 183 ntBASIC0.96□□□□□ -2.26
SLC44A4Q53GD3 SNORA63.2-201ENST00000362603 126 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 RNU6-161P-201ENST00000363051 106 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 SNORD115-37-201ENST00000363768 82 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 RNU6-811P-201ENST00000384069 107 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 Y_RNA.565-201ENST00000384719 101 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 MIR644A-201ENST00000385262 94 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 AC139453.2-201ENST00000487255 133 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 AC002350.1-201ENST00000490759 375 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 U6.100-201ENST00000636230 99 ntBASIC0.95□□□□□ -2.26
SLC44A4Q53GD3 MIRLET7A1-201ENST00000362295 80 ntBASIC0.94□□□□□ -2.26
SLC44A4Q53GD3 RNU6-129P-201ENST00000391022 107 ntBASIC0.94□□□□□ -2.26
SLC44A4Q53GD3 AC244098.3-201ENST00000424803 96 ntBASIC0.94□□□□□ -2.26
SLC44A4Q53GD3 AC244505.6-201ENST00000452829 130 ntBASIC0.94□□□□□ -2.26
SLC44A4Q53GD3 MIR3134-201ENST00000579433 74 ntBASIC0.94□□□□□ -2.26
SLC44A4Q53GD3 AC104996.3-201ENST00000590718 94 ntBASIC0.94□□□□□ -2.26
SLC44A4Q53GD3 MIR664A-201ENST00000626086 82 ntBASIC0.94□□□□□ -2.26
SLC44A4Q53GD3 MIR573-201ENST00000384964 99 ntBASIC0.93□□□□□ -2.26
SLC44A4Q53GD3 AC145423.2-201ENST00000610631 239 ntBASIC0.93□□□□□ -2.26
SLC44A4Q53GD3 RNU6-315P-201ENST00000362666 107 ntBASIC0.92□□□□□ -2.26
SLC44A4Q53GD3 SNORD115-24-201ENST00000363528 82 ntBASIC0.92□□□□□ -2.26
SLC44A4Q53GD3 RNA5SP117-201ENST00000365294 118 ntBASIC0.92□□□□□ -2.26
SLC44A4Q53GD3 Y_RNA.491-201ENST00000384417 107 ntBASIC0.92□□□□□ -2.26
SLC44A4Q53GD3 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
SLC44A4Q53GD3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SLC44A4Q53GD3 MIR4696-201ENST00000581431 70 ntBASIC0.92□□□□□ -2.26
SLC44A4Q53GD3 MIR3140-201ENST00000583685 90 ntBASIC0.92□□□□□ -2.26
SLC44A4Q53GD3 RNU6-664P-201ENST00000362381 107 ntBASIC0.91□□□□□ -2.26
SLC44A4Q53GD3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.91□□□□□ -2.26
SLC44A4Q53GD3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SLC44A4Q53GD3 MIR4484-201ENST00000582855 83 ntBASIC0.91□□□□□ -2.26
SLC44A4Q53GD3 MIR4662A-201ENST00000637499 67 ntBASIC0.91□□□□□ -2.26
SLC44A4Q53GD3 RNU6-330P-201ENST00000363015 107 ntBASIC0.9□□□□□ -2.27
SLC44A4Q53GD3 SNORD101-201ENST00000384027 73 ntBASIC0.9□□□□□ -2.27
SLC44A4Q53GD3 MIR548U-201ENST00000390728 81 ntBASIC0.9□□□□□ -2.27
SLC44A4Q53GD3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.9□□□□□ -2.27
SLC44A4Q53GD3 RNU6-557P-201ENST00000516842 110 ntBASIC0.9□□□□□ -2.27
SLC44A4Q53GD3 MIR3612-201ENST00000579753 87 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms