Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 Y_RNA.78-201ENST00000362970 110 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 SNORD45B-201ENST00000364617 72 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 RNU6-1144P-201ENST00000384247 104 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 RNU6-476P-201ENST00000384726 107 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 RNU6-466P-201ENST00000391224 103 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 MIR548H2-201ENST00000408874 88 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 RNU6-1064P-201ENST00000410626 104 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 SNORA19.1-201ENST00000410656 129 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 U7.6-201ENST00000610841 64 ntBASIC0.14□□□□□ -2.39
USP41Q3LFD5 RNU4-36P-201ENST00000364294 144 ntBASIC0.13□□□□□ -2.39
USP41Q3LFD5 RNA5SP205-201ENST00000364653 136 ntBASIC0.13□□□□□ -2.39
USP41Q3LFD5 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
USP41Q3LFD5 RNU6-1168P-201ENST00000390831 104 ntBASIC0.13□□□□□ -2.39
USP41Q3LFD5 RNU6-1154P-201ENST00000391001 104 ntBASIC0.13□□□□□ -2.39
USP41Q3LFD5 SNORD110-201ENST00000408189 75 ntBASIC0.13□□□□□ -2.39
USP41Q3LFD5 snoU13.11-201ENST00000459219 104 ntBASIC0.13□□□□□ -2.39
USP41Q3LFD5 AC025521.1-201ENST00000621624 286 ntBASIC0.13□□□□□ -2.39
USP41Q3LFD5 SNORA42.1-201ENST00000363515 137 ntBASIC0.12□□□□□ -2.39
USP41Q3LFD5 MIR519E-201ENST00000385075 84 ntBASIC0.12□□□□□ -2.39
USP41Q3LFD5 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
USP41Q3LFD5 HMGN2P22-201ENST00000427588 175 ntBASIC0.12□□□□□ -2.39
USP41Q3LFD5 AC093423.1-201ENST00000440817 142 ntBASIC0.12□□□□□ -2.39
USP41Q3LFD5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
USP41Q3LFD5 Y_RNA.10-201ENST00000362371 110 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 SNORD113-1-201ENST00000365321 69 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 MIR617-201ENST00000385030 97 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 Y_RNA.596-201ENST00000410462 109 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.11□□□□□ -2.39
USP41Q3LFD5 MIR2113-201ENST00000459007 91 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 RNU6-287P-201ENST00000516230 98 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 RNU6-313P-201ENST00000516317 112 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 MTRNR2L2-201ENST00000604882 87 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 MIR6129-201ENST00000616087 109 ntBASIC0.11□□□□□ -2.39
USP41Q3LFD5 Y_RNA.95-201ENST00000363079 95 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 SNORA51.5-201ENST00000384126 131 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 Y_RNA.467-201ENST00000384297 102 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 Y_RNA.681-201ENST00000516445 113 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 MIR4777-201ENST00000583710 86 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 MIR4439-201ENST00000583746 80 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 AC012531.4-201ENST00000616509 177 ntBASIC0.1□□□□□ -2.39
USP41Q3LFD5 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
USP41Q3LFD5 RNU1-141P-201ENST00000364623 158 ntBASIC0.09□□□□□ -2.4
USP41Q3LFD5 RNU6-1056P-201ENST00000383996 107 ntBASIC0.09□□□□□ -2.4
USP41Q3LFD5 RNU6-75P-201ENST00000515944 104 ntBASIC0.09□□□□□ -2.4
USP41Q3LFD5 RNU6-795P-201ENST00000516323 103 ntBASIC0.09□□□□□ -2.4
USP41Q3LFD5 RNU6-479P-201ENST00000516348 105 ntBASIC0.09□□□□□ -2.4
USP41Q3LFD5 MIR548AD-201ENST00000584780 82 ntBASIC0.09□□□□□ -2.4
USP41Q3LFD5 Y_RNA.207-201ENST00000364142 106 ntBASIC0.08□□□□□ -2.4
USP41Q3LFD5 Y_RNA.283-201ENST00000364798 112 ntBASIC0.08□□□□□ -2.4
USP41Q3LFD5 RNU6-813P-201ENST00000384691 107 ntBASIC0.08□□□□□ -2.4
USP41Q3LFD5 Y_RNA.601-201ENST00000410500 113 ntBASIC0.08□□□□□ -2.4
USP41Q3LFD5 AL513043.2-201ENST00000573941 143 ntBASIC0.08□□□□□ -2.4
USP41Q3LFD5 MIR5190-201ENST00000581537 80 ntBASIC0.08□□□□□ -2.4
USP41Q3LFD5 MIR4677-201ENST00000584153 80 ntBASIC0.08□□□□□ -2.4
USP41Q3LFD5 MIR3925-201ENST00000584674 77 ntBASIC0.08□□□□□ -2.4
USP41Q3LFD5 RNU6-161P-201ENST00000363051 106 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 RNU6-652P-201ENST00000365488 107 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 SNORA19-201ENST00000384737 128 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 MIR610-201ENST00000385139 96 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 AL606753.1-201ENST00000427435 87 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 Y_RNA.648-201ENST00000459455 110 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 RNU6-537P-201ENST00000517277 103 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 MIR4696-201ENST00000581431 70 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 AC103810.7-201ENST00000607821 91 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.07□□□□□ -2.4
USP41Q3LFD5 SNORD101-201ENST00000384027 73 ntBASIC0.06□□□□□ -2.4
USP41Q3LFD5 MIR1302-5-201ENST00000408164 150 ntBASIC0.06□□□□□ -2.4
USP41Q3LFD5 RNU7-85P-201ENST00000458851 63 ntBASIC0.06□□□□□ -2.4
USP41Q3LFD5 RNU6-904P-201ENST00000516206 101 ntBASIC0.06□□□□□ -2.4
USP41Q3LFD5 RNU6-782P-201ENST00000516852 104 ntBASIC0.06□□□□□ -2.4
USP41Q3LFD5 RNU6-834P-201ENST00000362367 110 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 SNORD114-5-201ENST00000362928 70 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 MIR593-201ENST00000384856 100 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 RNU6-554P-201ENST00000410466 106 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 Y_RNA.660-201ENST00000516002 120 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 RNU6-589P-201ENST00000516485 107 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 RNU6-1057P-201ENST00000517162 102 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 MIR4460-201ENST00000577862 86 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.05□□□□□ -2.4
USP41Q3LFD5 RNU6-664P-201ENST00000362381 107 ntBASIC0.04□□□□□ -2.4
USP41Q3LFD5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.04□□□□□ -2.4
USP41Q3LFD5 RNU6-106P-201ENST00000384405 107 ntBASIC0.04□□□□□ -2.4
USP41Q3LFD5 MIR590-201ENST00000385008 97 ntBASIC0.04□□□□□ -2.4
USP41Q3LFD5 RNU2-51P-201ENST00000410708 197 ntBASIC0.04□□□□□ -2.4
USP41Q3LFD5 SCARNA23-201ENST00000516060 130 ntBASIC0.04□□□□□ -2.4
USP41Q3LFD5 RNU6-65P-201ENST00000516332 98 ntBASIC0.03□□□□□ -2.4
USP41Q3LFD5 YWHAEP2-201ENST00000580066 112 ntBASIC0.03□□□□□ -2.4
USP41Q3LFD5 MIR548AE1-201ENST00000583292 70 ntBASIC0.03□□□□□ -2.4
USP41Q3LFD5 MIR4536-1-201ENST00000583537 88 ntBASIC0.03□□□□□ -2.4
USP41Q3LFD5 MIR4473-201ENST00000583731 91 ntBASIC0.03□□□□□ -2.4
USP41Q3LFD5 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
USP41Q3LFD5 Y_RNA.68-201ENST00000362881 102 ntBASIC0.02□□□□□ -2.41
USP41Q3LFD5 RNU6-756P-201ENST00000383997 107 ntBASIC0.02□□□□□ -2.41
USP41Q3LFD5 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
USP41Q3LFD5 SNORA25.13-201ENST00000516395 103 ntBASIC0.02□□□□□ -2.41
USP41Q3LFD5 RNU6-789P-201ENST00000517105 102 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms