Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
RSPO4Q2I0M5 SNORA31.11-201ENST00000516528 139 ntBASIC1.86□□□□□ -2.11
RSPO4Q2I0M5 RNU6-902P-201ENST00000517212 91 ntBASIC1.86□□□□□ -2.11
RSPO4Q2I0M5 MIR4771-2-201ENST00000577758 74 ntBASIC1.86□□□□□ -2.11
RSPO4Q2I0M5 MIR4771-1-201ENST00000582617 74 ntBASIC1.86□□□□□ -2.11
RSPO4Q2I0M5 AL049779.4-201ENST00000604500 156 ntBASIC1.86□□□□□ -2.11
RSPO4Q2I0M5 MIR6739-201ENST00000622461 75 ntBASIC1.86□□□□□ -2.11
RSPO4Q2I0M5 SNORA6-201ENST00000384033 151 ntBASIC1.85□□□□□ -2.11
RSPO4Q2I0M5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.85□□□□□ -2.11
RSPO4Q2I0M5 SNORA40.17-201ENST00000517256 115 ntBASIC1.85□□□□□ -2.11
RSPO4Q2I0M5 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.85□□□□□ -2.11
RSPO4Q2I0M5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RSPO4Q2I0M5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RSPO4Q2I0M5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
RSPO4Q2I0M5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 MIRLET7G-201ENST00000362280 84 ntBASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 MIR630-201ENST00000384957 97 ntBASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 MIR617-201ENST00000385030 97 ntBASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 SNORD42B-201ENST00000458893 67 ntBASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 RNA5SP147-201ENST00000516493 109 ntBASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 RNA5SP82-201ENST00000516707 92 ntBASIC1.84□□□□□ -2.11
RSPO4Q2I0M5 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
RSPO4Q2I0M5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.83□□□□□ -2.12
RSPO4Q2I0M5 RNA5SP102-201ENST00000516865 106 ntBASIC1.83□□□□□ -2.12
RSPO4Q2I0M5 MIR6515-201ENST00000619843 57 ntBASIC1.83□□□□□ -2.12
RSPO4Q2I0M5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RSPO4Q2I0M5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
RSPO4Q2I0M5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RSPO4Q2I0M5 RNA5SP403-201ENST00000363598 108 ntBASIC1.82□□□□□ -2.12
RSPO4Q2I0M5 SNORD113.3-201ENST00000364630 78 ntBASIC1.82□□□□□ -2.12
RSPO4Q2I0M5 RNU6-364P-201ENST00000384387 107 ntBASIC1.82□□□□□ -2.12
RSPO4Q2I0M5 AC106800.4-201ENST00000614905 153 ntBASIC1.82□□□□□ -2.12
RSPO4Q2I0M5 AL359851.1-201ENST00000569460 4997 ntBASIC1.82□□□□□ -2.12
RSPO4Q2I0M5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RSPO4Q2I0M5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
RSPO4Q2I0M5 SNORD114-22-201ENST00000365423 72 ntBASIC1.81□□□□□ -2.12
RSPO4Q2I0M5 RNA5SP338-201ENST00000410495 85 ntBASIC1.81□□□□□ -2.12
RSPO4Q2I0M5 AC067940.1-201ENST00000458411 300 ntBASIC1.81□□□□□ -2.12
RSPO4Q2I0M5 SNORA77B-201ENST00000578179 125 ntBASIC1.81□□□□□ -2.12
RSPO4Q2I0M5 MIR3664-201ENST00000579074 99 ntBASIC1.81□□□□□ -2.12
RSPO4Q2I0M5 MIR502-201ENST00000606349 86 ntBASIC1.81□□□□□ -2.12
RSPO4Q2I0M5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 RNU6-990P-201ENST00000364385 104 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 RNU6V-201ENST00000384105 107 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 MIR519E-201ENST00000385075 84 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 RPS26P5-201ENST00000418544 335 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 AL157398.1-201ENST00000452981 186 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 RNU1-123P-201ENST00000458950 160 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 RNU6-980P-201ENST00000516925 103 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 RNU7-161P-201ENST00000517289 62 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 AC036111.3-201ENST00000526389 112 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 MIR4676-201ENST00000583078 72 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 AP000553.5-201ENST00000641933 54 ntBASIC1.8□□□□□ -2.12
RSPO4Q2I0M5 SNORD115-24-201ENST00000363528 82 ntBASIC1.79□□□□□ -2.12
RSPO4Q2I0M5 MIR548C-201ENST00000384815 97 ntBASIC1.79□□□□□ -2.12
RSPO4Q2I0M5 SNORD113-2-201ENST00000391082 72 ntBASIC1.79□□□□□ -2.12
RSPO4Q2I0M5 RNA5SP212-201ENST00000391223 107 ntBASIC1.79□□□□□ -2.12
RSPO4Q2I0M5 MIR938-201ENST00000401216 83 ntBASIC1.79□□□□□ -2.12
RSPO4Q2I0M5 RNU7-102P-201ENST00000458948 62 ntBASIC1.79□□□□□ -2.12
RSPO4Q2I0M5 RNU6-717P-201ENST00000459076 104 ntBASIC1.79□□□□□ -2.12
RSPO4Q2I0M5 AC022709.1-201ENST00000615967 87 ntBASIC1.79□□□□□ -2.12
RSPO4Q2I0M5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.78□□□□□ -2.12
RSPO4Q2I0M5 RNU7-40P-201ENST00000516397 64 ntBASIC1.78□□□□□ -2.12
RSPO4Q2I0M5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.78□□□□□ -2.12
RSPO4Q2I0M5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
RSPO4Q2I0M5 AC027335.2-201ENST00000624030 375 ntBASIC1.78□□□□□ -2.12
RSPO4Q2I0M5 RNU6-35P-201ENST00000384530 107 ntBASIC1.77□□□□□ -2.13
RSPO4Q2I0M5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RSPO4Q2I0M5 SNORA31.14-201ENST00000516728 116 ntBASIC1.77□□□□□ -2.13
RSPO4Q2I0M5 AC018659.1-201ENST00000551083 169 ntBASIC1.77□□□□□ -2.13
RSPO4Q2I0M5 MIR6840-201ENST00000611937 71 ntBASIC1.77□□□□□ -2.13
RSPO4Q2I0M5 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.77□□□□□ -2.13
RSPO4Q2I0M5 Y_RNA.32-201ENST00000362589 110 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 RNU6-698P-201ENST00000363523 107 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 Y_RNA.250-201ENST00000364542 110 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 RNU6-34P-201ENST00000364874 107 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 RNU6-1162P-201ENST00000384443 104 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 MIR17-201ENST00000385012 84 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 MIR517B-201ENST00000385102 67 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 RNA5SP233-201ENST00000459153 113 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 RNU7-104P-201ENST00000459398 79 ntBASIC1.76□□□□□ -2.13
RSPO4Q2I0M5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RSPO4Q2I0M5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
RSPO4Q2I0M5 RNU6-930P-201ENST00000390938 100 ntBASIC1.75□□□□□ -2.13
RSPO4Q2I0M5 RNU7-174P-201ENST00000516248 59 ntBASIC1.75□□□□□ -2.13
RSPO4Q2I0M5 MIR4287-201ENST00000579398 78 ntBASIC1.75□□□□□ -2.13
RSPO4Q2I0M5 uc_338.16-201ENST00000621804 95 ntBASIC1.75□□□□□ -2.13
RSPO4Q2I0M5 SNORA7.1-201ENST00000363750 139 ntBASIC1.74□□□□□ -2.13
RSPO4Q2I0M5 MIR521-2-201ENST00000384818 87 ntBASIC1.74□□□□□ -2.13
RSPO4Q2I0M5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RSPO4Q2I0M5 SNORD111-201ENST00000408139 94 ntBASIC1.74□□□□□ -2.13
RSPO4Q2I0M5 RNU7-119P-201ENST00000459279 63 ntBASIC1.74□□□□□ -2.13
RSPO4Q2I0M5 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
RSPO4Q2I0M5 U4.4-201ENST00000620626 117 ntBASIC1.74□□□□□ -2.13
RSPO4Q2I0M5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
RSPO4Q2I0M5 RNA5SP276-201ENST00000362580 94 ntBASIC1.73□□□□□ -2.13
RSPO4Q2I0M5 Y_RNA.174-201ENST00000363781 105 ntBASIC1.73□□□□□ -2.13
RSPO4Q2I0M5 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms