Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 Y_RNA.236-201ENST00000364427 111 ntBASIC-1□□□□□ -2.57
HSPG2P98160 Y_RNA.339-201ENST00000365325 102 ntBASIC-1□□□□□ -2.57
HSPG2P98160 Y_RNA.507-201ENST00000384500 99 ntBASIC-1□□□□□ -2.57
HSPG2P98160 RNU6-1111P-201ENST00000391118 107 ntBASIC-1□□□□□ -2.57
HSPG2P98160 MIR513C-201ENST00000401352 84 ntBASIC-1□□□□□ -2.57
HSPG2P98160 snoU13.10-201ENST00000459301 103 ntBASIC-1□□□□□ -2.57
HSPG2P98160 Y_RNA.682-201ENST00000516457 100 ntBASIC-1□□□□□ -2.57
HSPG2P98160 RNU6-1314P-201ENST00000517139 104 ntBASIC-1□□□□□ -2.57
HSPG2P98160 AF246928.1-201ENST00000623768 87 ntBASIC-1□□□□□ -2.57
HSPG2P98160 RNU6-643P-201ENST00000384018 107 ntBASIC-1□□□□□ -2.57
HSPG2P98160 SNORA75-201ENST00000384158 137 ntBASIC-1□□□□□ -2.57
HSPG2P98160 RNU6-662P-201ENST00000384253 104 ntBASIC-1□□□□□ -2.57
HSPG2P98160 RNU6-616P-201ENST00000384353 107 ntBASIC-1□□□□□ -2.57
HSPG2P98160 AL021921.1-201ENST00000442774 93 ntBASIC-1□□□□□ -2.57
HSPG2P98160 MIR548W-201ENST00000581970 74 ntBASIC-1□□□□□ -2.57
HSPG2P98160 SNORD113-8-201ENST00000363497 74 ntBASIC-1□□□□□ -2.57
HSPG2P98160 RNU6-211P-201ENST00000384047 107 ntBASIC-1□□□□□ -2.57
HSPG2P98160 AL691482.2-201ENST00000457453 84 ntBASIC-1□□□□□ -2.57
HSPG2P98160 Y_RNA.708-201ENST00000516950 96 ntBASIC-1□□□□□ -2.57
HSPG2P98160 MIR3064-201ENST00000581130 66 ntBASIC-1□□□□□ -2.57
HSPG2P98160 AC084782.3-201ENST00000612282 578 ntBASIC-1□□□□□ -2.57
HSPG2P98160 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1□□□□□ -2.57
HSPG2P98160 AC124864.2-201ENST00000624736 186 ntBASIC-1□□□□□ -2.57
HSPG2P98160 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
HSPG2P98160 RNU6-651P-201ENST00000411040 105 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 MIR3915-201ENST00000578518 97 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 RNU7-123P-201ENST00000515911 60 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 RNU6-415P-201ENST00000516252 97 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 AC012531.4-201ENST00000616509 177 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 MIR376A1-201ENST00000616574 68 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 AC040904.1-201ENST00000590850 223 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 AL359880.1-201ENST00000621879 266 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 AL606534.2-204ENST00000635008 178 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 RNU6-818P-201ENST00000364837 108 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 MIR3657-201ENST00000584818 117 ntBASIC-1.01□□□□□ -2.57
HSPG2P98160 MTND5P26-201ENST00000426018 1752 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 MTCO2P19-201ENST00000427513 598 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 SNORD116-25-201ENST00000516517 92 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 RNY1P1-201ENST00000364372 112 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 MIR548A3-201ENST00000385297 97 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 MIR759-201ENST00000390224 91 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 MIR4528-201ENST00000577763 90 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 AC021753.1-201ENST00000635724 168 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 RNA5SP292-201ENST00000390974 118 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 RNU6-101P-201ENST00000410323 104 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 RNU7-85P-201ENST00000458851 63 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 AC005520.4-201ENST00000604337 90 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.02□□□□□ -2.57
HSPG2P98160 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 MIR3163-201ENST00000581592 73 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 SNORD2.1-201ENST00000458762 69 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 RNU6-507P-201ENST00000516045 100 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 RNU6-521P-201ENST00000516663 105 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 RNU6-861P-201ENST00000516745 106 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 AC104996.3-201ENST00000590718 94 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 U2.7-201ENST00000619197 100 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 snoU18.1-201ENST00000629629 71 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 AC099799.1-201ENST00000439809 192 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 RNU6-240P-201ENST00000516098 97 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 RNU7-6P-201ENST00000516845 62 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 MIR5693-201ENST00000577722 73 ntBASIC-1.03□□□□□ -2.57
HSPG2P98160 RNU4-90P-201ENST00000362773 141 ntBASIC-1.03□□□□□ -2.58
HSPG2P98160 RNU6-682P-201ENST00000363843 106 ntBASIC-1.03□□□□□ -2.58
HSPG2P98160 SNORD50.2-201ENST00000365465 70 ntBASIC-1.03□□□□□ -2.58
HSPG2P98160 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.03□□□□□ -2.58
HSPG2P98160 SNORA26.8-201ENST00000391306 124 ntBASIC-1.03□□□□□ -2.58
HSPG2P98160 AL513043.2-201ENST00000573941 143 ntBASIC-1.03□□□□□ -2.58
HSPG2P98160 AL442128.1-201ENST00000615151 90 ntBASIC-1.03□□□□□ -2.58
HSPG2P98160 MIR1321-201ENST00000637766 79 ntBASIC-1.03□□□□□ -2.58
HSPG2P98160 MIR379-201ENST00000362218 67 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 MIR616-201ENST00000385293 97 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 SNORD115-46-201ENST00000390982 71 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 MIR3646-201ENST00000578301 84 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 AL050303.3-201ENST00000613704 284 ntBASIC-1.04□□□□□ -2.58
HSPG2P98160 RNU6-340P-201ENST00000364005 107 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms