Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RN7SL793P-201ENST00000583259 296 ntBASIC1.04□□□□□ -2.24
HERVK_113P62684 MIRLET7F1-201ENST00000362202 87 ntBASIC1.03□□□□□ -2.24
HERVK_113P62684 RNU6-811P-201ENST00000384069 107 ntBASIC1.03□□□□□ -2.24
HERVK_113P62684 MIR548BB-201ENST00000626714 66 ntBASIC1.03□□□□□ -2.24
HERVK_113P62684 MIR1236-201ENST00000408340 102 ntBASIC1.02□□□□□ -2.25
HERVK_113P62684 RNU7-104P-201ENST00000459398 79 ntBASIC1.02□□□□□ -2.25
HERVK_113P62684 MIR3678-201ENST00000578455 94 ntBASIC1.02□□□□□ -2.25
HERVK_113P62684 U6.100-201ENST00000636230 99 ntBASIC1.02□□□□□ -2.25
HERVK_113P62684 SNORD115-37-201ENST00000363768 82 ntBASIC1.01□□□□□ -2.25
HERVK_113P62684 RNU6-1229P-201ENST00000364295 107 ntBASIC1.01□□□□□ -2.25
HERVK_113P62684 RNA5SP173-201ENST00000364857 136 ntBASIC1.01□□□□□ -2.25
HERVK_113P62684 RNU6-132P-201ENST00000383863 107 ntBASIC1.01□□□□□ -2.25
HERVK_113P62684 RNU6-242P-201ENST00000384359 107 ntBASIC1.01□□□□□ -2.25
HERVK_113P62684 MIR548U-201ENST00000390728 81 ntBASIC1.01□□□□□ -2.25
HERVK_113P62684 RNA5SP222-201ENST00000411039 105 ntBASIC1.01□□□□□ -2.25
HERVK_113P62684 AC244098.3-201ENST00000424803 96 ntBASIC1.01□□□□□ -2.25
HERVK_113P62684 RNU7-153P-201ENST00000516455 62 ntBASIC1□□□□□ -2.25
HERVK_113P62684 RNU6-135P-201ENST00000516769 101 ntBASIC1□□□□□ -2.25
HERVK_113P62684 MIR5588-201ENST00000581890 63 ntBASIC1□□□□□ -2.25
HERVK_113P62684 AL353765.1-201ENST00000605514 183 ntBASIC1□□□□□ -2.25
HERVK_113P62684 Y_RNA.178-201ENST00000363832 102 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 RNU6-573P-201ENST00000383938 106 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 SNORD101-201ENST00000384027 73 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 RNA5SP292-201ENST00000390974 118 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HERVK_113P62684 Y_RNA.596-201ENST00000410462 109 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 RNU6-592P-201ENST00000411333 103 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 RNU6-1265P-201ENST00000516342 103 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 RNU7-13P-201ENST00000516413 62 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 RNU7-161P-201ENST00000517289 62 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 AC104996.3-201ENST00000590718 94 ntBASIC0.99□□□□□ -2.25
HERVK_113P62684 MIR18A-201ENST00000362310 71 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 RNU6-664P-201ENST00000362381 107 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 Y_RNA.30-201ENST00000362572 97 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 Y_RNA.239-201ENST00000364444 113 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 MIR216A-201ENST00000385063 110 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 SNORA18.5-201ENST00000516616 101 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 MIR4714-201ENST00000580728 77 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 MIR3064-201ENST00000581130 66 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 MIR4639-201ENST00000584938 69 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 AC244669.1-204ENST00000621564 178 ntBASIC0.98□□□□□ -2.25
HERVK_113P62684 RNA5SP403-201ENST00000363598 108 ntBASIC0.97□□□□□ -2.25
HERVK_113P62684 SNORD18A-201ENST00000363753 72 ntBASIC0.97□□□□□ -2.25
HERVK_113P62684 Y_RNA.426-201ENST00000384068 113 ntBASIC0.97□□□□□ -2.25
HERVK_113P62684 Y_RNA.491-201ENST00000384417 107 ntBASIC0.97□□□□□ -2.25
HERVK_113P62684 SNORD28-201ENST00000384706 75 ntBASIC0.97□□□□□ -2.25
HERVK_113P62684 MIR548L-201ENST00000408303 86 ntBASIC0.97□□□□□ -2.25
HERVK_113P62684 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.97□□□□□ -2.25
HERVK_113P62684 MIR4696-201ENST00000581431 70 ntBASIC0.97□□□□□ -2.25
HERVK_113P62684 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HERVK_113P62684 RNU6-1276P-201ENST00000365372 104 ntBASIC0.96□□□□□ -2.26
HERVK_113P62684 RNU6-979P-201ENST00000383896 107 ntBASIC0.96□□□□□ -2.26
HERVK_113P62684 AC093729.1-201ENST00000513074 128 ntBASIC0.96□□□□□ -2.26
HERVK_113P62684 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
HERVK_113P62684 MIR4796-201ENST00000580742 81 ntBASIC0.96□□□□□ -2.26
HERVK_113P62684 AC067863.3-201ENST00000624172 122 ntBASIC0.96□□□□□ -2.26
HERVK_113P62684 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.96□□□□□ -2.26
HERVK_113P62684 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
HERVK_113P62684 SNORA36.2-201ENST00000384004 127 ntBASIC0.95□□□□□ -2.26
HERVK_113P62684 RNU6-1152P-201ENST00000384576 107 ntBASIC0.95□□□□□ -2.26
HERVK_113P62684 AC006160.2-201ENST00000637708 154 ntBASIC0.95□□□□□ -2.26
HERVK_113P62684 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HERVK_113P62684 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.94□□□□□ -2.26
HERVK_113P62684 Y_RNA.207-201ENST00000364142 106 ntBASIC0.93□□□□□ -2.26
HERVK_113P62684 SNORD115-44-201ENST00000365391 82 ntBASIC0.93□□□□□ -2.26
HERVK_113P62684 RNU6-716P-201ENST00000365621 103 ntBASIC0.93□□□□□ -2.26
HERVK_113P62684 MIR608-201ENST00000384820 100 ntBASIC0.93□□□□□ -2.26
HERVK_113P62684 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
HERVK_113P62684 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
HERVK_113P62684 RNU6-287P-201ENST00000516230 98 ntBASIC0.93□□□□□ -2.26
HERVK_113P62684 RNU6-1057P-201ENST00000517162 102 ntBASIC0.93□□□□□ -2.26
HERVK_113P62684 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
HERVK_113P62684 RNU4-45P-201ENST00000365469 141 ntBASIC0.92□□□□□ -2.26
HERVK_113P62684 SNORA25.13-201ENST00000516395 103 ntBASIC0.92□□□□□ -2.26
HERVK_113P62684 RNA5SP47-201ENST00000517230 109 ntBASIC0.92□□□□□ -2.26
HERVK_113P62684 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.92□□□□□ -2.26
HERVK_113P62684 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.92□□□□□ -2.26
HERVK_113P62684 RNA5SP457-201ENST00000363657 124 ntBASIC0.91□□□□□ -2.26
HERVK_113P62684 MIR193B-201ENST00000384907 83 ntBASIC0.91□□□□□ -2.26
HERVK_113P62684 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
HERVK_113P62684 RNU6-935P-201ENST00000410371 100 ntBASIC0.91□□□□□ -2.26
HERVK_113P62684 MIR3920-201ENST00000581751 86 ntBASIC0.91□□□□□ -2.26
HERVK_113P62684 MTRNR2L2-201ENST00000604882 87 ntBASIC0.91□□□□□ -2.26
HERVK_113P62684 MIR1245B-201ENST00000636115 69 ntBASIC0.91□□□□□ -2.26
HERVK_113P62684 RNY1P8-201ENST00000383970 114 ntBASIC0.9□□□□□ -2.27
HERVK_113P62684 Y_RNA.437-201ENST00000384113 113 ntBASIC0.9□□□□□ -2.27
HERVK_113P62684 Y_RNA.607-201ENST00000410597 98 ntBASIC0.9□□□□□ -2.27
HERVK_113P62684 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.9□□□□□ -2.27
HERVK_113P62684 RNU7-171P-201ENST00000459581 62 ntBASIC0.9□□□□□ -2.27
HERVK_113P62684 FGF7P7-201ENST00000514120 227 ntBASIC0.9□□□□□ -2.27
HERVK_113P62684 SCARNA16.5-201ENST00000517114 183 ntBASIC0.9□□□□□ -2.27
HERVK_113P62684 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.9□□□□□ -2.27
HERVK_113P62684 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
HERVK_113P62684 MIR451A-201ENST00000385059 72 ntBASIC0.89□□□□□ -2.27
HERVK_113P62684 MIR2113-201ENST00000459007 91 ntBASIC0.89□□□□□ -2.27
HERVK_113P62684 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
HERVK_113P62684 RNA5SP227-201ENST00000516184 113 ntBASIC0.89□□□□□ -2.27
HERVK_113P62684 RNA5SP94-201ENST00000516917 108 ntBASIC0.89□□□□□ -2.27
HERVK_113P62684 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
HERVK_113P62684 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms