Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RNU6-219P-201ENST00000364728 107 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 RNU7-13P-201ENST00000516413 62 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 RNU6-135P-201ENST00000516769 101 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 RNU6-762P-201ENST00000517107 102 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 MIR6515-201ENST00000619843 57 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 AC067863.3-201ENST00000624172 122 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 MIR4679-1-201ENST00000637619 75 ntBASIC0.61□□□□□ -2.31
SEC61A1P61619 Y_RNA.73-201ENST00000362910 113 ntBASIC0.6□□□□□ -2.31
SEC61A1P61619 SNORD101-201ENST00000384027 73 ntBASIC0.6□□□□□ -2.31
SEC61A1P61619 RNA5SP292-201ENST00000390974 118 ntBASIC0.6□□□□□ -2.31
SEC61A1P61619 Y_RNA.620-201ENST00000411009 88 ntBASIC0.6□□□□□ -2.31
SEC61A1P61619 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.6□□□□□ -2.31
SEC61A1P61619 RNU7-153P-201ENST00000516455 62 ntBASIC0.6□□□□□ -2.31
SEC61A1P61619 MIR4696-201ENST00000581431 70 ntBASIC0.6□□□□□ -2.31
SEC61A1P61619 RNA5SP517-201ENST00000364724 117 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 RNU6-110P-201ENST00000384508 104 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SEC61A1P61619 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 Y_RNA.596-201ENST00000410462 109 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.59□□□□□ -2.31
SEC61A1P61619 RNA5SP227-201ENST00000516184 113 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 RNU6-287P-201ENST00000516230 98 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 RNA5SP268-201ENST00000516828 124 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 SCARNA16.5-201ENST00000517114 183 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 MIR3064-201ENST00000581130 66 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 MIR548AG2-201ENST00000581228 64 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 MIR3920-201ENST00000581751 86 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 SNORA25.18-201ENST00000607153 114 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.59□□□□□ -2.31
SEC61A1P61619 RNU6-664P-201ENST00000362381 107 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 Y_RNA.207-201ENST00000364142 106 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 SNORD73B-201ENST00000364394 72 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 RNU6-726P-201ENST00000364680 107 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 RNU4-45P-201ENST00000365469 141 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 RNU6-811P-201ENST00000384069 107 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 Y_RNA.558-201ENST00000384685 113 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 AL590095.2-201ENST00000604136 117 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 IGLL4P-201ENST00000614590 133 ntBASIC0.58□□□□□ -2.32
SEC61A1P61619 RNY1P1-201ENST00000364372 112 ntBASIC0.57□□□□□ -2.32
SEC61A1P61619 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
SEC61A1P61619 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.57□□□□□ -2.32
SEC61A1P61619 AC104996.3-201ENST00000590718 94 ntBASIC0.57□□□□□ -2.32
SEC61A1P61619 MIR7107-201ENST00000611489 80 ntBASIC0.57□□□□□ -2.32
SEC61A1P61619 AC092634.7-201ENST00000621022 103 ntBASIC0.57□□□□□ -2.32
SEC61A1P61619 RNU6-633P-201ENST00000362612 103 ntBASIC0.56□□□□□ -2.32
SEC61A1P61619 RNU6-509P-201ENST00000363519 107 ntBASIC0.56□□□□□ -2.32
SEC61A1P61619 Y_RNA.239-201ENST00000364444 113 ntBASIC0.56□□□□□ -2.32
SEC61A1P61619 SNORA8.2-201ENST00000384372 139 ntBASIC0.56□□□□□ -2.32
SEC61A1P61619 SNORD90-201ENST00000391145 111 ntBASIC0.56□□□□□ -2.32
SEC61A1P61619 Y_RNA.611-201ENST00000410682 108 ntBASIC0.56□□□□□ -2.32
SEC61A1P61619 SNORA18.5-201ENST00000516616 101 ntBASIC0.56□□□□□ -2.32
SEC61A1P61619 AC062037.1-201ENST00000605302 128 ntBASIC0.56□□□□□ -2.32
SEC61A1P61619 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
SEC61A1P61619 RNU6-1126P-201ENST00000384002 107 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 RNU6-675P-201ENST00000384236 104 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 Y_RNA.491-201ENST00000384417 107 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 MIR519C-201ENST00000385053 87 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 MIR548U-201ENST00000390728 81 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 RNU6-1052P-201ENST00000411398 104 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 MIR2113-201ENST00000459007 91 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 RNU6-719P-201ENST00000516671 104 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 MIR4752-201ENST00000579672 72 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 MTRNR2L2-201ENST00000604882 87 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 PVT1_3.1-201ENST00000620853 95 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 MIR548BB-201ENST00000626714 66 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 MIR6828-201ENST00000636181 60 ntBASIC0.55□□□□□ -2.32
SEC61A1P61619 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
SEC61A1P61619 MIR450A2-201ENST00000385022 100 ntBASIC0.54□□□□□ -2.32
SEC61A1P61619 RNU6-269P-201ENST00000391077 97 ntBASIC0.54□□□□□ -2.32
SEC61A1P61619 MIR1236-201ENST00000408340 102 ntBASIC0.54□□□□□ -2.32
SEC61A1P61619 FGF7P7-201ENST00000514120 227 ntBASIC0.54□□□□□ -2.32
SEC61A1P61619 RNU6-497P-201ENST00000365316 104 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 SNORD115-44-201ENST00000365391 82 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 MIR451A-201ENST00000385059 72 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 SNORD41.1-201ENST00000391000 69 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 RNU6-935P-201ENST00000410371 100 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 AC022137.1-201ENST00000483735 151 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 MIR4796-201ENST00000580742 81 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 MIR3140-201ENST00000583685 90 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.53□□□□□ -2.32
SEC61A1P61619 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
SEC61A1P61619 MIR598-201ENST00000384868 97 ntBASIC0.52□□□□□ -2.33
SEC61A1P61619 MIR519E-201ENST00000385075 84 ntBASIC0.52□□□□□ -2.33
SEC61A1P61619 AC069271.1-201ENST00000445577 156 ntBASIC0.52□□□□□ -2.33
SEC61A1P61619 RNU6-1057P-201ENST00000517162 102 ntBASIC0.52□□□□□ -2.33
SEC61A1P61619 Y_RNA.388-201ENST00000383919 113 ntBASIC0.51□□□□□ -2.33
SEC61A1P61619 MIR617-201ENST00000385030 97 ntBASIC0.51□□□□□ -2.33
SEC61A1P61619 SNORA40.8-201ENST00000411034 126 ntBASIC0.51□□□□□ -2.33
SEC61A1P61619 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
SEC61A1P61619 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
SEC61A1P61619 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms