Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SNORD115-44-201ENST00000365391 82 ntBASIC0.81□□□□□ -2.28
CLRN1P58418 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CLRN1P58418 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.81□□□□□ -2.28
CLRN1P58418 snoU13.18-201ENST00000459483 104 ntBASIC0.81□□□□□ -2.28
CLRN1P58418 AC022137.1-201ENST00000483735 151 ntBASIC0.81□□□□□ -2.28
CLRN1P58418 RNU6-287P-201ENST00000516230 98 ntBASIC0.81□□□□□ -2.28
CLRN1P58418 RNA5SP94-201ENST00000516917 108 ntBASIC0.81□□□□□ -2.28
CLRN1P58418 SCARNA16.5-201ENST00000517114 183 ntBASIC0.81□□□□□ -2.28
CLRN1P58418 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.81□□□□□ -2.28
CLRN1P58418 Y_RNA.207-201ENST00000364142 106 ntBASIC0.8□□□□□ -2.28
CLRN1P58418 Y_RNA.491-201ENST00000384417 107 ntBASIC0.8□□□□□ -2.28
CLRN1P58418 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
CLRN1P58418 SNORA18.5-201ENST00000516616 101 ntBASIC0.8□□□□□ -2.28
CLRN1P58418 MIR5588-201ENST00000581890 63 ntBASIC0.8□□□□□ -2.28
CLRN1P58418 SNORA36.1-201ENST00000363424 132 ntBASIC0.79□□□□□ -2.28
CLRN1P58418 RNU6-716P-201ENST00000365621 103 ntBASIC0.79□□□□□ -2.28
CLRN1P58418 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
CLRN1P58418 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CLRN1P58418 MIR548L-201ENST00000408303 86 ntBASIC0.79□□□□□ -2.28
CLRN1P58418 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
CLRN1P58418 Y_RNA.118-201ENST00000363300 101 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 SNORD114-27-201ENST00000363766 70 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 SNORD115-37-201ENST00000363768 82 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 RNU6-726P-201ENST00000364680 107 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 SNORD114-22-201ENST00000365423 72 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 MIR4796-201ENST00000580742 81 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 MIR548AG2-201ENST00000581228 64 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
CLRN1P58418 RNU6-979P-201ENST00000383896 107 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 RNU6-1126P-201ENST00000384002 107 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 MIR2113-201ENST00000459007 91 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 AC093729.1-201ENST00000513074 128 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 RNA5SP268-201ENST00000516828 124 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 AC006160.2-201ENST00000637708 154 ntBASIC0.77□□□□□ -2.29
CLRN1P58418 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
CLRN1P58418 Y_RNA.355-201ENST00000365462 98 ntBASIC0.76□□□□□ -2.29
CLRN1P58418 RNU6-1152P-201ENST00000384576 107 ntBASIC0.76□□□□□ -2.29
CLRN1P58418 SNORD41.1-201ENST00000391000 69 ntBASIC0.76□□□□□ -2.29
CLRN1P58418 RNU6-935P-201ENST00000410371 100 ntBASIC0.76□□□□□ -2.29
CLRN1P58418 RNU6-592P-201ENST00000411333 103 ntBASIC0.76□□□□□ -2.29
CLRN1P58418 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.76□□□□□ -2.29
CLRN1P58418 RNA5SP227-201ENST00000516184 113 ntBASIC0.76□□□□□ -2.29
CLRN1P58418 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.76□□□□□ -2.29
CLRN1P58418 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CLRN1P58418 RNA5SP173-201ENST00000364857 136 ntBASIC0.75□□□□□ -2.29
CLRN1P58418 SNORA72.7-201ENST00000516349 94 ntBASIC0.75□□□□□ -2.29
CLRN1P58418 SNORA25.13-201ENST00000516395 103 ntBASIC0.75□□□□□ -2.29
CLRN1P58418 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
CLRN1P58418 RNA5SP517-201ENST00000364724 117 ntBASIC0.74□□□□□ -2.29
CLRN1P58418 Y_RNA.426-201ENST00000384068 113 ntBASIC0.74□□□□□ -2.29
CLRN1P58418 RNU6-242P-201ENST00000384359 107 ntBASIC0.74□□□□□ -2.29
CLRN1P58418 SNORD90-201ENST00000391145 111 ntBASIC0.74□□□□□ -2.29
CLRN1P58418 RNU6-1057P-201ENST00000517162 102 ntBASIC0.74□□□□□ -2.29
CLRN1P58418 RNU6-1276P-201ENST00000365372 104 ntBASIC0.73□□□□□ -2.29
CLRN1P58418 RNU6-573P-201ENST00000383938 106 ntBASIC0.73□□□□□ -2.29
CLRN1P58418 MIR617-201ENST00000385030 97 ntBASIC0.73□□□□□ -2.29
CLRN1P58418 MIR451A-201ENST00000385059 72 ntBASIC0.73□□□□□ -2.29
CLRN1P58418 MIR519E-201ENST00000385075 84 ntBASIC0.73□□□□□ -2.29
CLRN1P58418 MIR7107-201ENST00000611489 80 ntBASIC0.73□□□□□ -2.29
CLRN1P58418 AC092634.7-201ENST00000621022 103 ntBASIC0.73□□□□□ -2.29
CLRN1P58418 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CLRN1P58418 RNU1-93P-201ENST00000364704 169 ntBASIC0.72□□□□□ -2.29
CLRN1P58418 SNORA8.2-201ENST00000384372 139 ntBASIC0.72□□□□□ -2.29
CLRN1P58418 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
CLRN1P58418 RNU7-171P-201ENST00000459581 62 ntBASIC0.72□□□□□ -2.29
CLRN1P58418 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
CLRN1P58418 AC140658.3-201ENST00000567603 271 ntBASIC0.72□□□□□ -2.29
CLRN1P58418 MIR151B-201ENST00000584249 96 ntBASIC0.72□□□□□ -2.29
CLRN1P58418 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
CLRN1P58418 MIR96-201ENST00000362288 78 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 RNU6-1051P-201ENST00000365471 102 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 MIR520E-201ENST00000384867 87 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 RNU6-269P-201ENST00000391077 97 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 Y_RNA.607-201ENST00000410597 98 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 RNU6-1052P-201ENST00000411398 104 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 RNU7-74P-201ENST00000459104 62 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 FGF7P7-201ENST00000514120 227 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 RNU6-719P-201ENST00000516671 104 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 MIR3973-201ENST00000579824 107 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 MIR3140-201ENST00000583685 90 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
CLRN1P58418 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
CLRN1P58418 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
CLRN1P58418 SNORA25.18-201ENST00000607153 114 ntBASIC0.7□□□□□ -2.3
CLRN1P58418 AL162376.1-201ENST00000624117 175 ntBASIC0.69□□□□□ -2.3
CLRN1P58418 SNORA63.2-201ENST00000362603 126 ntBASIC0.68□□□□□ -2.3
CLRN1P58418 RNY4P3-201ENST00000365254 95 ntBASIC0.68□□□□□ -2.3
CLRN1P58418 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
CLRN1P58418 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
CLRN1P58418 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CLRN1P58418 SNORA40.8-201ENST00000411034 126 ntBASIC0.67□□□□□ -2.3
CLRN1P58418 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
CLRN1P58418 MIR6767-201ENST00000637302 66 ntBASIC0.67□□□□□ -2.3
CLRN1P58418 RNU6-624P-201ENST00000363411 107 ntBASIC0.66□□□□□ -2.3
CLRN1P58418 Y_RNA.437-201ENST00000384113 113 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms