Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.44□□□□□ -2.34
LIMK2P53671 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.44□□□□□ -2.34
LIMK2P53671 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
LIMK2P53671 RNU6-957P-201ENST00000363652 99 ntBASIC0.43□□□□□ -2.34
LIMK2P53671 RNU7-104P-201ENST00000459398 79 ntBASIC0.43□□□□□ -2.34
LIMK2P53671 Y_RNA.648-201ENST00000459455 110 ntBASIC0.43□□□□□ -2.34
LIMK2P53671 RNU6-162P-201ENST00000516228 103 ntBASIC0.43□□□□□ -2.34
LIMK2P53671 Y_RNA.677-201ENST00000516401 85 ntBASIC0.43□□□□□ -2.34
LIMK2P53671 U7.3-201ENST00000616123 62 ntBASIC0.43□□□□□ -2.34
LIMK2P53671 TRDV1-202ENST00000621643 102 ntBASIC0.43□□□□□ -2.34
LIMK2P53671 MIR2052-201ENST00000636055 55 ntBASIC0.43□□□□□ -2.34
LIMK2P53671 Y_RNA.290-201ENST00000364879 114 ntBASIC0.42□□□□□ -2.34
LIMK2P53671 SNORA8.2-201ENST00000384372 139 ntBASIC0.42□□□□□ -2.34
LIMK2P53671 RNA5SP268-201ENST00000516828 124 ntBASIC0.42□□□□□ -2.34
LIMK2P53671 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
LIMK2P53671 MIR924-201ENST00000638017 53 ntBASIC0.42□□□□□ -2.34
LIMK2P53671 SNORD116-10-201ENST00000363791 102 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 RNU6-726P-201ENST00000364680 107 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 Y_RNA.283-201ENST00000364798 112 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 RNU6-466P-201ENST00000391224 103 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.41□□□□□ -2.34
LIMK2P53671 RNU7-85P-201ENST00000458851 63 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 MIR3920-201ENST00000581751 86 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 MIR7107-201ENST00000611489 80 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 AC067863.3-201ENST00000624172 122 ntBASIC0.41□□□□□ -2.34
LIMK2P53671 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
LIMK2P53671 Y_RNA.190-201ENST00000363964 101 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 RNU6-716P-201ENST00000365621 103 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 MIR488-201ENST00000365739 83 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 SNORD41.1-201ENST00000391000 69 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 RNU6-75P-201ENST00000515944 104 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 RNA5SP227-201ENST00000516184 113 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 SNORA25.18-201ENST00000607153 114 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 MALAT1.1-201ENST00000618249 95 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 U6.100-201ENST00000636230 99 ntBASIC0.4□□□□□ -2.35
LIMK2P53671 SNORD118-201ENST00000363593 134 ntBASIC0.39□□□□□ -2.35
LIMK2P53671 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
LIMK2P53671 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
LIMK2P53671 RNU7-13P-201ENST00000516413 62 ntBASIC0.39□□□□□ -2.35
LIMK2P53671 MTRNR2L2-201ENST00000604882 87 ntBASIC0.39□□□□□ -2.35
LIMK2P53671 MIR330-201ENST00000362196 94 ntBASIC0.38□□□□□ -2.35
LIMK2P53671 MIR518A1-201ENST00000385068 85 ntBASIC0.38□□□□□ -2.35
LIMK2P53671 SNORD4B-201ENST00000459083 72 ntBASIC0.38□□□□□ -2.35
LIMK2P53671 MIR548AG2-201ENST00000581228 64 ntBASIC0.38□□□□□ -2.35
LIMK2P53671 SNORD115-44-201ENST00000365391 82 ntBASIC0.37□□□□□ -2.35
LIMK2P53671 MIR548L-201ENST00000408303 86 ntBASIC0.37□□□□□ -2.35
LIMK2P53671 Y_RNA.596-201ENST00000410462 109 ntBASIC0.37□□□□□ -2.35
LIMK2P53671 RNU6-519P-201ENST00000410590 108 ntBASIC0.37□□□□□ -2.35
LIMK2P53671 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
LIMK2P53671 RNU6-65P-201ENST00000516332 98 ntBASIC0.37□□□□□ -2.35
LIMK2P53671 RNA5SP330-201ENST00000517096 96 ntBASIC0.37□□□□□ -2.35
LIMK2P53671 AC026421.1-201ENST00000519101 163 ntBASIC0.37□□□□□ -2.35
LIMK2P53671 MIR4536-1-201ENST00000583537 88 ntBASIC0.37□□□□□ -2.35
LIMK2P53671 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
LIMK2P53671 RNA5SP457-201ENST00000363657 124 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 Y_RNA.258-201ENST00000364613 105 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 RNU6-1126P-201ENST00000384002 107 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 RNY1P7-201ENST00000384743 110 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 Y_RNA.609-201ENST00000410669 89 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 SNORD71-201ENST00000411292 86 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 RNU6-287P-201ENST00000516230 98 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 MIR4696-201ENST00000581431 70 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 MIR8087-201ENST00000612745 78 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 AL162376.1-201ENST00000624117 175 ntBASIC0.36□□□□□ -2.35
LIMK2P53671 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
LIMK2P53671 RNU6-664P-201ENST00000362381 107 ntBASIC0.35□□□□□ -2.35
LIMK2P53671 Y_RNA.207-201ENST00000364142 106 ntBASIC0.35□□□□□ -2.35
LIMK2P53671 SNORD101-201ENST00000384027 73 ntBASIC0.35□□□□□ -2.35
LIMK2P53671 RNU6-269P-201ENST00000391077 97 ntBASIC0.35□□□□□ -2.35
LIMK2P53671 AC069271.1-201ENST00000445577 156 ntBASIC0.35□□□□□ -2.35
LIMK2P53671 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.35□□□□□ -2.35
LIMK2P53671 MIRLET7F1-201ENST00000362202 87 ntBASIC0.34□□□□□ -2.36
LIMK2P53671 RNU6-1131P-201ENST00000364955 107 ntBASIC0.34□□□□□ -2.36
LIMK2P53671 RNU6-132P-201ENST00000383863 107 ntBASIC0.34□□□□□ -2.36
LIMK2P53671 MIR617-201ENST00000385030 97 ntBASIC0.34□□□□□ -2.36
LIMK2P53671 MIR2113-201ENST00000459007 91 ntBASIC0.34□□□□□ -2.36
LIMK2P53671 Y_RNA.694-201ENST00000516677 117 ntBASIC0.34□□□□□ -2.36
LIMK2P53671 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 Y_RNA.220-201ENST00000364244 109 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 RNU6-49P-201ENST00000384256 107 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 MIR519E-201ENST00000385075 84 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 RNU2-59P-201ENST00000410482 191 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 MTATP6P29-201ENST00000415057 132 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 MIR4752-201ENST00000579672 72 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 MIR3064-201ENST00000581130 66 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 RNU1-29P-201ENST00000606574 126 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.33□□□□□ -2.36
LIMK2P53671 RNU6-1298P-201ENST00000362456 101 ntBASIC0.32□□□□□ -2.36
LIMK2P53671 Y_RNA.115-201ENST00000363272 98 ntBASIC0.32□□□□□ -2.36
LIMK2P53671 RNY4P30-201ENST00000410216 95 ntBASIC0.32□□□□□ -2.36
LIMK2P53671 RNU7-74P-201ENST00000459104 62 ntBASIC0.32□□□□□ -2.36
LIMK2P53671 AC104996.3-201ENST00000590718 94 ntBASIC0.32□□□□□ -2.36
LIMK2P53671 Y_RNA.239-201ENST00000364444 113 ntBASIC0.31□□□□□ -2.36
LIMK2P53671 RNU6-811P-201ENST00000384069 107 ntBASIC0.31□□□□□ -2.36
LIMK2P53671 RNU6-935P-201ENST00000410371 100 ntBASIC0.31□□□□□ -2.36
LIMK2P53671 AC093423.1-201ENST00000440817 142 ntBASIC0.31□□□□□ -2.36
LIMK2P53671 RNA5SP484-201ENST00000458857 111 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 1028.7 ms