Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MIR4639-201ENST00000584938 69 ntBASIC2.53□□□□□ -2
NUBP1P53384 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.53□□□□□ -2
NUBP1P53384 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2
NUBP1P53384 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
NUBP1P53384 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NUBP1P53384 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NUBP1P53384 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
NUBP1P53384 RNU6-990P-201ENST00000364385 104 ntBASIC2.51□□□□□ -2.01
NUBP1P53384 SNORD41.1-201ENST00000391000 69 ntBASIC2.51□□□□□ -2.01
NUBP1P53384 RMST_2.1-201ENST00000617263 136 ntBASIC2.51□□□□□ -2.01
NUBP1P53384 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.51□□□□□ -2.01
NUBP1P53384 SNORD60.1-201ENST00000362451 73 ntBASIC2.5□□□□□ -2.01
NUBP1P53384 SNORA7.1-201ENST00000363750 139 ntBASIC2.5□□□□□ -2.01
NUBP1P53384 AC025033.1-201ENST00000463883 194 ntBASIC2.5□□□□□ -2.01
NUBP1P53384 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.5□□□□□ -2.01
NUBP1P53384 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.5□□□□□ -2.01
NUBP1P53384 MIR3670-2-201ENST00000582974 65 ntBASIC2.5□□□□□ -2.01
NUBP1P53384 MIR3670-1-201ENST00000584160 65 ntBASIC2.5□□□□□ -2.01
NUBP1P53384 MIR3670-3-201ENST00000584855 65 ntBASIC2.5□□□□□ -2.01
NUBP1P53384 MIR3670-4-201ENST00000612260 65 ntBASIC2.5□□□□□ -2.01
NUBP1P53384 SNORD113-2-201ENST00000391082 72 ntBASIC2.49□□□□□ -2.01
NUBP1P53384 AC002350.1-201ENST00000490759 375 ntBASIC2.49□□□□□ -2.01
NUBP1P53384 AC046143.2-201ENST00000609789 160 ntBASIC2.49□□□□□ -2.01
NUBP1P53384 MIR6873-201ENST00000622788 63 ntBASIC2.49□□□□□ -2.01
NUBP1P53384 SNORA64-201ENST00000384674 134 ntBASIC2.48□□□□□ -2.01
NUBP1P53384 MIR521-2-201ENST00000384818 87 ntBASIC2.48□□□□□ -2.01
NUBP1P53384 SNORD88.1-201ENST00000408684 91 ntBASIC2.48□□□□□ -2.01
NUBP1P53384 HMGN2P19-201ENST00000425149 265 ntBASIC2.48□□□□□ -2.01
NUBP1P53384 RNA5SP233-201ENST00000459153 113 ntBASIC2.48□□□□□ -2.01
NUBP1P53384 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.48□□□□□ -2.01
NUBP1P53384 MIR4781-201ENST00000585250 76 ntBASIC2.48□□□□□ -2.01
NUBP1P53384 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
NUBP1P53384 AC244669.1-204ENST00000621564 178 ntBASIC2.48□□□□□ -2.01
NUBP1P53384 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NUBP1P53384 MIR644A-201ENST00000385262 94 ntBASIC2.47□□□□□ -2.01
NUBP1P53384 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.47□□□□□ -2.01
NUBP1P53384 SNORA70.22-201ENST00000517160 124 ntBASIC2.47□□□□□ -2.01
NUBP1P53384 Y_RNA.118-201ENST00000363300 101 ntBASIC2.46□□□□□ -2.02
NUBP1P53384 RNA5SP456-201ENST00000364002 114 ntBASIC2.46□□□□□ -2.02
NUBP1P53384 SNORD114-30-201ENST00000364448 72 ntBASIC2.46□□□□□ -2.02
NUBP1P53384 SNORD28-201ENST00000384706 75 ntBASIC2.46□□□□□ -2.02
NUBP1P53384 MIR630-201ENST00000384957 97 ntBASIC2.46□□□□□ -2.02
NUBP1P53384 RNU6-902P-201ENST00000517212 91 ntBASIC2.46□□□□□ -2.02
NUBP1P53384 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
NUBP1P53384 MIR219B-201ENST00000637023 88 ntBASIC2.46□□□□□ -2.02
NUBP1P53384 Y_RNA.355-201ENST00000365462 98 ntBASIC2.45□□□□□ -2.02
NUBP1P53384 SNORD12-201ENST00000391002 90 ntBASIC2.45□□□□□ -2.02
NUBP1P53384 AL157398.1-201ENST00000452981 186 ntBASIC2.45□□□□□ -2.02
NUBP1P53384 AC008834.1-201ENST00000511612 175 ntBASIC2.45□□□□□ -2.02
NUBP1P53384 RNU1-40P-201ENST00000516816 164 ntBASIC2.45□□□□□ -2.02
NUBP1P53384 RNU1-97P-201ENST00000516872 164 ntBASIC2.45□□□□□ -2.02
NUBP1P53384 RNU6-295P-201ENST00000516901 104 ntBASIC2.45□□□□□ -2.02
NUBP1P53384 SNORA40.17-201ENST00000517256 115 ntBASIC2.45□□□□□ -2.02
NUBP1P53384 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
NUBP1P53384 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
NUBP1P53384 SNORD113-4-201ENST00000364802 75 ntBASIC2.44□□□□□ -2.02
NUBP1P53384 MIR517B-201ENST00000385102 67 ntBASIC2.44□□□□□ -2.02
NUBP1P53384 SNORA75.1-201ENST00000391130 148 ntBASIC2.44□□□□□ -2.02
NUBP1P53384 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.44□□□□□ -2.02
NUBP1P53384 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.44□□□□□ -2.02
NUBP1P53384 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.44□□□□□ -2.02
NUBP1P53384 MIR6840-201ENST00000611937 71 ntBASIC2.44□□□□□ -2.02
NUBP1P53384 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NUBP1P53384 RNU1-141P-201ENST00000364623 158 ntBASIC2.43□□□□□ -2.02
NUBP1P53384 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.43□□□□□ -2.02
NUBP1P53384 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
NUBP1P53384 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
NUBP1P53384 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NUBP1P53384 SNORA15B-2-201ENST00000384058 135 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 SNORA15B-1-201ENST00000384334 135 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 RNU6-520P-201ENST00000384717 104 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 MIR499A-201ENST00000384903 122 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NUBP1P53384 AC079804.2-201ENST00000490376 200 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.41□□□□□ -2.02
NUBP1P53384 MIR5007-201ENST00000583098 95 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 snoU13.31-201ENST00000607291 104 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 uc_338.10-201ENST00000621872 182 ntBASIC2.41□□□□□ -2.02
NUBP1P53384 RNU6-698P-201ENST00000363523 107 ntBASIC2.4□□□□□ -2.03
NUBP1P53384 RNU6-34P-201ENST00000364874 107 ntBASIC2.4□□□□□ -2.03
NUBP1P53384 RNA5SP489-201ENST00000410986 109 ntBASIC2.4□□□□□ -2.03
NUBP1P53384 MIR5694-201ENST00000581190 76 ntBASIC2.4□□□□□ -2.03
NUBP1P53384 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NUBP1P53384 Z82195.2-201ENST00000612348 18351 ntBASIC2.4□□□□□ -2.03
NUBP1P53384 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NUBP1P53384 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
NUBP1P53384 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.39□□□□□ -2.03
NUBP1P53384 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
NUBP1P53384 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NUBP1P53384 RNU6-726P-201ENST00000364680 107 ntBASIC2.38□□□□□ -2.03
NUBP1P53384 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
NUBP1P53384 RPS29P6-201ENST00000438196 145 ntBASIC2.38□□□□□ -2.03
NUBP1P53384 SNORA8.2-201ENST00000384372 139 ntBASIC2.37□□□□□ -2.03
NUBP1P53384 MIR222-201ENST00000384992 110 ntBASIC2.37□□□□□ -2.03
NUBP1P53384 AC026436.1-201ENST00000510537 270 ntBASIC2.37□□□□□ -2.03
NUBP1P53384 AC021146.9-201ENST00000512503 156 ntBASIC2.37□□□□□ -2.03
NUBP1P53384 RNU1-17P-201ENST00000363022 152 ntBASIC2.36□□□□□ -2.03
NUBP1P53384 RNU5B-6P-201ENST00000516765 68 ntBASIC2.36□□□□□ -2.03
NUBP1P53384 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms