Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.62□□□□□ -2.15
USP11P51784 U6.81-201ENST00000612550 106 ntBASIC1.62□□□□□ -2.15
USP11P51784 MIR499A-201ENST00000384903 122 ntBASIC1.61□□□□□ -2.15
USP11P51784 MIR1265-201ENST00000408444 86 ntBASIC1.61□□□□□ -2.15
USP11P51784 RNU7-90P-201ENST00000459216 62 ntBASIC1.61□□□□□ -2.15
USP11P51784 Y_RNA.32-201ENST00000362589 110 ntBASIC1.6□□□□□ -2.15
USP11P51784 RNU6-649P-201ENST00000384463 107 ntBASIC1.6□□□□□ -2.15
USP11P51784 RNU6-977P-201ENST00000516411 103 ntBASIC1.6□□□□□ -2.15
USP11P51784 SNORA31.14-201ENST00000516728 116 ntBASIC1.6□□□□□ -2.15
USP11P51784 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
USP11P51784 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.6□□□□□ -2.15
USP11P51784 uc_338.16-201ENST00000621804 95 ntBASIC1.6□□□□□ -2.15
USP11P51784 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USP11P51784 Y_RNA.258-201ENST00000364613 105 ntBASIC1.59□□□□□ -2.15
USP11P51784 MIR154-201ENST00000385243 84 ntBASIC1.59□□□□□ -2.15
USP11P51784 MIR548AG2-201ENST00000581228 64 ntBASIC1.59□□□□□ -2.15
USP11P51784 AL157834.3-201ENST00000615543 103 ntBASIC1.59□□□□□ -2.15
USP11P51784 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USP11P51784 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
USP11P51784 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
USP11P51784 RNU6-994P-201ENST00000410507 111 ntBASIC1.58□□□□□ -2.16
USP11P51784 MIR3675-201ENST00000583661 73 ntBASIC1.58□□□□□ -2.16
USP11P51784 RNA5SP403-201ENST00000363598 108 ntBASIC1.57□□□□□ -2.16
USP11P51784 RNU6-681P-201ENST00000364012 104 ntBASIC1.57□□□□□ -2.16
USP11P51784 MIR100-201ENST00000385259 80 ntBASIC1.57□□□□□ -2.16
USP11P51784 RNU1-119P-201ENST00000391122 165 ntBASIC1.57□□□□□ -2.16
USP11P51784 SNORD30.1-201ENST00000391309 70 ntBASIC1.57□□□□□ -2.16
USP11P51784 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
USP11P51784 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.57□□□□□ -2.16
USP11P51784 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.57□□□□□ -2.16
USP11P51784 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USP11P51784 Y_RNA.340-201ENST00000365330 92 ntBASIC1.56□□□□□ -2.16
USP11P51784 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.56□□□□□ -2.16
USP11P51784 RNU7-161P-201ENST00000517289 62 ntBASIC1.56□□□□□ -2.16
USP11P51784 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
USP11P51784 U6.111-201ENST00000636093 83 ntBASIC1.56□□□□□ -2.16
USP11P51784 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
USP11P51784 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
USP11P51784 MIR1-1-201ENST00000362147 71 ntBASIC1.55□□□□□ -2.16
USP11P51784 SNORA7.1-201ENST00000363750 139 ntBASIC1.55□□□□□ -2.16
USP11P51784 RNU6-800P-201ENST00000384473 103 ntBASIC1.55□□□□□ -2.16
USP11P51784 MIR520F-201ENST00000384824 87 ntBASIC1.55□□□□□ -2.16
USP11P51784 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
USP11P51784 RNU6-1177P-201ENST00000391058 104 ntBASIC1.55□□□□□ -2.16
USP11P51784 AC125388.1-201ENST00000459631 156 ntBASIC1.55□□□□□ -2.16
USP11P51784 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.55□□□□□ -2.16
USP11P51784 RNA5SP61-201ENST00000516453 100 ntBASIC1.55□□□□□ -2.16
USP11P51784 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
USP11P51784 MIR3920-201ENST00000581751 86 ntBASIC1.55□□□□□ -2.16
USP11P51784 SNORD115-24-201ENST00000363528 82 ntBASIC1.54□□□□□ -2.16
USP11P51784 RNU6-382P-201ENST00000365181 106 ntBASIC1.54□□□□□ -2.16
USP11P51784 RNU6-663P-201ENST00000391105 106 ntBASIC1.54□□□□□ -2.16
USP11P51784 U3.27-201ENST00000391237 200 ntBASIC1.54□□□□□ -2.16
USP11P51784 MIR1827-201ENST00000408549 66 ntBASIC1.54□□□□□ -2.16
USP11P51784 SNORA70.22-201ENST00000517160 124 ntBASIC1.54□□□□□ -2.16
USP11P51784 MIR7111-201ENST00000619751 72 ntBASIC1.54□□□□□ -2.16
USP11P51784 SNORD115-22-201ENST00000364456 82 ntBASIC1.53□□□□□ -2.16
USP11P51784 RNU6-392P-201ENST00000364926 101 ntBASIC1.53□□□□□ -2.16
USP11P51784 SNORD115-44-201ENST00000365391 82 ntBASIC1.53□□□□□ -2.16
USP11P51784 RNU6-1126P-201ENST00000384002 107 ntBASIC1.53□□□□□ -2.16
USP11P51784 SNORD45A-201ENST00000384512 84 ntBASIC1.53□□□□□ -2.16
USP11P51784 AC002429.1-201ENST00000437672 148 ntBASIC1.53□□□□□ -2.16
USP11P51784 RMST_2.1-201ENST00000617263 136 ntBASIC1.53□□□□□ -2.16
USP11P51784 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
USP11P51784 SNORD45.1-201ENST00000363181 77 ntBASIC1.52□□□□□ -2.17
USP11P51784 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.52□□□□□ -2.17
USP11P51784 RNU7-13P-201ENST00000516413 62 ntBASIC1.52□□□□□ -2.17
USP11P51784 RNU6-1057P-201ENST00000517162 102 ntBASIC1.52□□□□□ -2.17
USP11P51784 MIR4773-1-201ENST00000637203 78 ntBASIC1.52□□□□□ -2.17
USP11P51784 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USP11P51784 MIR758-201ENST00000390227 88 ntBASIC1.51□□□□□ -2.17
USP11P51784 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
USP11P51784 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
USP11P51784 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
USP11P51784 Y_RNA.174-201ENST00000363781 105 ntBASIC1.5□□□□□ -2.17
USP11P51784 MIR222-201ENST00000384992 110 ntBASIC1.5□□□□□ -2.17
USP11P51784 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
USP11P51784 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.5□□□□□ -2.17
USP11P51784 Y_RNA.355-201ENST00000365462 98 ntBASIC1.49□□□□□ -2.17
USP11P51784 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
USP11P51784 MIR3660-201ENST00000584845 100 ntBASIC1.49□□□□□ -2.17
USP11P51784 AC005520.4-201ENST00000604337 90 ntBASIC1.49□□□□□ -2.17
USP11P51784 AL136317.1-201ENST00000612653 226 ntBASIC1.49□□□□□ -2.17
USP11P51784 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USP11P51784 Y_RNA.205-201ENST00000364128 113 ntBASIC1.48□□□□□ -2.17
USP11P51784 MIR644A-201ENST00000385262 94 ntBASIC1.48□□□□□ -2.17
USP11P51784 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.48□□□□□ -2.17
USP11P51784 AC002350.1-201ENST00000490759 375 ntBASIC1.48□□□□□ -2.17
USP11P51784 AL078603.1-201ENST00000603824 313 ntBASIC1.48□□□□□ -2.17
USP11P51784 RNA5SP327-201ENST00000362494 101 ntBASIC1.47□□□□□ -2.17
USP11P51784 Y_RNA.118-201ENST00000363300 101 ntBASIC1.47□□□□□ -2.17
USP11P51784 SNORD116-24-201ENST00000384549 92 ntBASIC1.47□□□□□ -2.17
USP11P51784 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
USP11P51784 MIR1276-201ENST00000408707 83 ntBASIC1.47□□□□□ -2.17
USP11P51784 RNU7-104P-201ENST00000459398 79 ntBASIC1.47□□□□□ -2.17
USP11P51784 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
USP11P51784 MIR617-201ENST00000385030 97 ntBASIC1.46□□□□□ -2.18
USP11P51784 MIR519E-201ENST00000385075 84 ntBASIC1.46□□□□□ -2.18
USP11P51784 RNU6-604P-201ENST00000390917 100 ntBASIC1.46□□□□□ -2.18
USP11P51784 RNU6-881P-201ENST00000516813 102 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms