Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 RNU6-820P-201ENST00000384273 107 ntBASIC0.66□□□□□ -2.3
PDLIM4P50479 MIR450A2-201ENST00000385022 100 ntBASIC0.66□□□□□ -2.3
PDLIM4P50479 Y_RNA.593-201ENST00000410292 98 ntBASIC0.66□□□□□ -2.3
PDLIM4P50479 Y_RNA.596-201ENST00000410462 109 ntBASIC0.66□□□□□ -2.3
PDLIM4P50479 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
PDLIM4P50479 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
PDLIM4P50479 SNORD41.1-201ENST00000391000 69 ntBASIC0.65□□□□□ -2.31
PDLIM4P50479 RNU6-402P-201ENST00000410678 103 ntBASIC0.65□□□□□ -2.31
PDLIM4P50479 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
PDLIM4P50479 SCARNA16.5-201ENST00000517114 183 ntBASIC0.65□□□□□ -2.31
PDLIM4P50479 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
PDLIM4P50479 AC244669.1-204ENST00000621564 178 ntBASIC0.65□□□□□ -2.31
PDLIM4P50479 RNU6-509P-201ENST00000363519 107 ntBASIC0.64□□□□□ -2.31
PDLIM4P50479 Y_RNA.221-201ENST00000364248 96 ntBASIC0.64□□□□□ -2.31
PDLIM4P50479 RNU6-1134P-201ENST00000365156 101 ntBASIC0.64□□□□□ -2.31
PDLIM4P50479 MIR1236-201ENST00000408340 102 ntBASIC0.64□□□□□ -2.31
PDLIM4P50479 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
PDLIM4P50479 MIR3920-201ENST00000581751 86 ntBASIC0.64□□□□□ -2.31
PDLIM4P50479 RNU6-664P-201ENST00000362381 107 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 RNA5SP325-201ENST00000363756 130 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 RNU6-1229P-201ENST00000364295 107 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 RNY1P4-201ENST00000384595 115 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
PDLIM4P50479 MIR548U-201ENST00000390728 81 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 RNA5SP436-201ENST00000516020 115 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 MIR4696-201ENST00000581431 70 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 AC067863.3-201ENST00000624172 122 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 U6.100-201ENST00000636230 99 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 MIR4679-1-201ENST00000637619 75 ntBASIC0.63□□□□□ -2.31
PDLIM4P50479 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
PDLIM4P50479 SNORD73B-201ENST00000364394 72 ntBASIC0.62□□□□□ -2.31
PDLIM4P50479 RNU6-726P-201ENST00000364680 107 ntBASIC0.62□□□□□ -2.31
PDLIM4P50479 RNU6-811P-201ENST00000384069 107 ntBASIC0.62□□□□□ -2.31
PDLIM4P50479 MIR519C-201ENST00000385053 87 ntBASIC0.62□□□□□ -2.31
PDLIM4P50479 RNU7-13P-201ENST00000516413 62 ntBASIC0.62□□□□□ -2.31
PDLIM4P50479 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
PDLIM4P50479 MIR3064-201ENST00000581130 66 ntBASIC0.62□□□□□ -2.31
PDLIM4P50479 AC104996.3-201ENST00000590718 94 ntBASIC0.62□□□□□ -2.31
PDLIM4P50479 SNORA36.1-201ENST00000363424 132 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 SNORD101-201ENST00000384027 73 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 RNU6-1152P-201ENST00000384576 107 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 RNU6-267P-201ENST00000516714 103 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 RN7SL793P-201ENST00000583259 296 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 IGLL4P-201ENST00000614590 133 ntBASIC0.61□□□□□ -2.31
PDLIM4P50479 Y_RNA.205-201ENST00000364128 113 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 Y_RNA.207-201ENST00000364142 106 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 SNORD115-27-201ENST00000364430 82 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 Y_RNA.239-201ENST00000364444 113 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 RNU6-132P-201ENST00000383863 107 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 RNU6-1126P-201ENST00000384002 107 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 MIR617-201ENST00000385030 97 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 MIR140-201ENST00000385282 100 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 RNU7-74P-201ENST00000459104 62 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 RNU6-287P-201ENST00000516230 98 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 RNU6-762P-201ENST00000517107 102 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 MIR6513-201ENST00000621188 64 ntBASIC0.6□□□□□ -2.31
PDLIM4P50479 RNY1P1-201ENST00000364372 112 ntBASIC0.59□□□□□ -2.31
PDLIM4P50479 RNU6-979P-201ENST00000383896 107 ntBASIC0.59□□□□□ -2.31
PDLIM4P50479 Y_RNA.491-201ENST00000384417 107 ntBASIC0.59□□□□□ -2.31
PDLIM4P50479 U3.27-201ENST00000391237 200 ntBASIC0.59□□□□□ -2.31
PDLIM4P50479 RNU6-935P-201ENST00000410371 100 ntBASIC0.59□□□□□ -2.31
PDLIM4P50479 AC093729.1-201ENST00000513074 128 ntBASIC0.59□□□□□ -2.31
PDLIM4P50479 RN7SKP12-201ENST00000516275 143 ntBASIC0.59□□□□□ -2.31
PDLIM4P50479 MIR548BB-201ENST00000626714 66 ntBASIC0.59□□□□□ -2.31
PDLIM4P50479 MIR216B-201ENST00000390186 82 ntBASIC0.58□□□□□ -2.32
PDLIM4P50479 RNU7-104P-201ENST00000459398 79 ntBASIC0.58□□□□□ -2.32
PDLIM4P50479 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.58□□□□□ -2.32
PDLIM4P50479 MIR548AG2-201ENST00000581228 64 ntBASIC0.58□□□□□ -2.32
PDLIM4P50479 AC062037.1-201ENST00000605302 128 ntBASIC0.58□□□□□ -2.32
PDLIM4P50479 AL162376.1-201ENST00000624117 175 ntBASIC0.58□□□□□ -2.32
PDLIM4P50479 RNA5SP292-201ENST00000390974 118 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 RNY4P29-201ENST00000410801 97 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 AC093423.1-201ENST00000440817 142 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 MIR2113-201ENST00000459007 91 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 RNU7-171P-201ENST00000459581 62 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 SNORA18.5-201ENST00000516616 101 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 RNA5SP268-201ENST00000516828 124 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 MIR5588-201ENST00000581890 63 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 AC006160.2-201ENST00000637708 154 ntBASIC0.57□□□□□ -2.32
PDLIM4P50479 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
PDLIM4P50479 MIRLET7F1-201ENST00000362202 87 ntBASIC0.56□□□□□ -2.32
PDLIM4P50479 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
PDLIM4P50479 RNU4-32P-201ENST00000363404 141 ntBASIC0.56□□□□□ -2.32
PDLIM4P50479 Y_RNA.426-201ENST00000384068 113 ntBASIC0.56□□□□□ -2.32
PDLIM4P50479 SNORA8.2-201ENST00000384372 139 ntBASIC0.56□□□□□ -2.32
PDLIM4P50479 SNORA26.2-201ENST00000390922 122 ntBASIC0.56□□□□□ -2.32
PDLIM4P50479 AC140658.3-201ENST00000567603 271 ntBASIC0.56□□□□□ -2.32
PDLIM4P50479 MIR4796-201ENST00000580742 81 ntBASIC0.56□□□□□ -2.32
PDLIM4P50479 RNU6-624P-201ENST00000363411 107 ntBASIC0.55□□□□□ -2.32
PDLIM4P50479 SNORD118-201ENST00000363593 134 ntBASIC0.55□□□□□ -2.32
PDLIM4P50479 SNORD115-37-201ENST00000363768 82 ntBASIC0.55□□□□□ -2.32
PDLIM4P50479 MIR519E-201ENST00000385075 84 ntBASIC0.55□□□□□ -2.32
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