Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 MIR181B2-201ENST00000385004 89 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 MIR516B1-201ENST00000385211 90 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 AC244250.2-201ENST00000418731 148 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 AC109327.2-201ENST00000448339 378 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.12□□□□□ -2.43
LIG4P49917 RNU7-85P-201ENST00000458851 63 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 RNU7-188P-201ENST00000517063 64 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 CR383656.4-201ENST00000546909 122 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 MIR4679-2-201ENST00000578358 77 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 YWHAEP2-201ENST00000580066 112 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 MIR4473-201ENST00000583731 91 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 RNU6-90P-201ENST00000606352 106 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 MIR6514-201ENST00000622549 70 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.13□□□□□ -2.43
LIG4P49917 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.13□□□□□ -2.43
LIG4P49917 SNORD38.2-201ENST00000384470 69 ntBASIC-0.13□□□□□ -2.43
LIG4P49917 SPINT5P-201ENST00000448174 155 ntBASIC-0.13□□□□□ -2.43
LIG4P49917 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
LIG4P49917 SNORD33.1-201ENST00000516213 88 ntBASIC-0.13□□□□□ -2.43
LIG4P49917 MIR3671-201ENST00000580455 88 ntBASIC-0.13□□□□□ -2.43
LIG4P49917 RNU6-832P-201ENST00000363319 107 ntBASIC-0.14□□□□□ -2.43
LIG4P49917 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.14□□□□□ -2.43
LIG4P49917 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.14□□□□□ -2.43
LIG4P49917 SNORD115-44-201ENST00000365391 82 ntBASIC-0.14□□□□□ -2.43
LIG4P49917 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.14□□□□□ -2.43
LIG4P49917 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.14□□□□□ -2.43
LIG4P49917 MIR4777-201ENST00000583710 86 ntBASIC-0.14□□□□□ -2.43
LIG4P49917 MIR548O2-201ENST00000616090 70 ntBASIC-0.14□□□□□ -2.43
LIG4P49917 AL157777.2-201ENST00000258070 137 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 MIR148A-201ENST00000362215 68 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 RNU6-664P-201ENST00000362381 107 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 U8.6-201ENST00000364939 135 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 SNORD50.2-201ENST00000365465 70 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 MIR582-201ENST00000365731 98 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 RNU6-132P-201ENST00000383863 107 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 RNU6-811P-201ENST00000384069 107 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 MIR652-201ENST00000385278 98 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 RNU6-243P-201ENST00000391140 107 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 SNORD42B-201ENST00000458893 67 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 AC097510.1-201ENST00000510945 133 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 AC068339.1-201ENST00000526965 141 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 AL590491.3-201ENST00000610731 82 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 AC084368.1-201ENST00000620935 65 ntBASIC-0.15□□□□□ -2.43
LIG4P49917 RNU6-774P-201ENST00000363238 107 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 SNORA75.1-201ENST00000391130 148 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 SNORD90-201ENST00000391145 111 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 RNU7-74P-201ENST00000459104 62 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 RNU6-537P-201ENST00000517277 103 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 AL513043.2-201ENST00000573941 143 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 MIR4694-201ENST00000578534 80 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 MIR3133-201ENST00000583157 78 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 RNU6-86P-201ENST00000606534 107 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.16□□□□□ -2.44
LIG4P49917 RNU6-54P-201ENST00000365563 107 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 SNORA24B-201ENST00000384176 131 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 RNU6-80P-201ENST00000384195 107 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 MIR548A1-201ENST00000385041 97 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 MIR1912-201ENST00000410389 80 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 SNORA19.1-201ENST00000410656 129 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 SNORD4A-201ENST00000459174 72 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 SNORA40.17-201ENST00000517256 115 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 MIR4460-201ENST00000577862 86 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 MIR5009-201ENST00000578736 100 ntBASIC-0.17□□□□□ -2.44
LIG4P49917 RNY3P2-201ENST00000362918 102 ntBASIC-0.18□□□□□ -2.44
LIG4P49917 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.18□□□□□ -2.44
LIG4P49917 RNU6-46P-201ENST00000383860 107 ntBASIC-0.18□□□□□ -2.44
LIG4P49917 SNORD101-201ENST00000384027 73 ntBASIC-0.18□□□□□ -2.44
LIG4P49917 RNU6-154P-201ENST00000384306 106 ntBASIC-0.18□□□□□ -2.44
LIG4P49917 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.18□□□□□ -2.44
LIG4P49917 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.18□□□□□ -2.44
LIG4P49917 AC012531.4-201ENST00000616509 177 ntBASIC-0.18□□□□□ -2.44
LIG4P49917 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.18□□□□□ -2.44
LIG4P49917 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.19□□□□□ -2.44
LIG4P49917 SNORA18.1-201ENST00000363418 128 ntBASIC-0.19□□□□□ -2.44
LIG4P49917 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.19□□□□□ -2.44
LIG4P49917 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.19□□□□□ -2.44
LIG4P49917 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.19□□□□□ -2.44
LIG4P49917 MIR9-2-201ENST00000384838 87 ntBASIC-0.19□□□□□ -2.44
LIG4P49917 uc_338.10-201ENST00000621872 182 ntBASIC-0.19□□□□□ -2.44
LIG4P49917 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 SNORD49B-201ENST00000365172 72 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 RNU6-209P-201ENST00000384118 107 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 RNA5SP300-201ENST00000391197 107 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 MIR548E-201ENST00000408287 88 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 SNORD4B-201ENST00000459083 72 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 RNU6-795P-201ENST00000516323 103 ntBASIC-0.2□□□□□ -2.44
LIG4P49917 MIR3140-201ENST00000583685 90 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms