Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 Y_RNA.224-201ENST00000364308 111 ntBASIC0.48□□□□□ -2.33
CLK1P49759 Y_RNA.226-201ENST00000364337 114 ntBASIC0.48□□□□□ -2.33
CLK1P49759 RNU6-1126P-201ENST00000384002 107 ntBASIC0.48□□□□□ -2.33
CLK1P49759 RNU7-13P-201ENST00000516413 62 ntBASIC0.48□□□□□ -2.33
CLK1P49759 RNA5SP268-201ENST00000516828 124 ntBASIC0.48□□□□□ -2.33
CLK1P49759 MIR4696-201ENST00000581431 70 ntBASIC0.48□□□□□ -2.33
CLK1P49759 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CLK1P49759 Y_RNA.43-201ENST00000362670 111 ntBASIC0.47□□□□□ -2.33
CLK1P49759 MIR1287-201ENST00000408492 90 ntBASIC0.47□□□□□ -2.33
CLK1P49759 Y_RNA.596-201ENST00000410462 109 ntBASIC0.47□□□□□ -2.33
CLK1P49759 RNA5SP220-201ENST00000516298 104 ntBASIC0.47□□□□□ -2.33
CLK1P49759 RNU6-65P-201ENST00000516332 98 ntBASIC0.47□□□□□ -2.33
CLK1P49759 MIR3064-201ENST00000581130 66 ntBASIC0.47□□□□□ -2.33
CLK1P49759 MIR4668-201ENST00000582284 70 ntBASIC0.47□□□□□ -2.33
CLK1P49759 MIR4536-1-201ENST00000583537 88 ntBASIC0.47□□□□□ -2.33
CLK1P49759 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.47□□□□□ -2.33
CLK1P49759 AC067863.3-201ENST00000624172 122 ntBASIC0.47□□□□□ -2.33
CLK1P49759 MIRLET7F1-201ENST00000362202 87 ntBASIC0.46□□□□□ -2.34
CLK1P49759 RNU6-664P-201ENST00000362381 107 ntBASIC0.46□□□□□ -2.34
CLK1P49759 RNU6-1255P-201ENST00000363434 112 ntBASIC0.46□□□□□ -2.34
CLK1P49759 Y_RNA.207-201ENST00000364142 106 ntBASIC0.46□□□□□ -2.34
CLK1P49759 SNORD115-27-201ENST00000364430 82 ntBASIC0.46□□□□□ -2.34
CLK1P49759 SNORD115-44-201ENST00000365391 82 ntBASIC0.46□□□□□ -2.34
CLK1P49759 RNU6-716P-201ENST00000365621 103 ntBASIC0.46□□□□□ -2.34
CLK1P49759 SNORD101-201ENST00000384027 73 ntBASIC0.46□□□□□ -2.34
CLK1P49759 RNU6-675P-201ENST00000384236 104 ntBASIC0.46□□□□□ -2.34
CLK1P49759 MIR518E-201ENST00000385252 88 ntBASIC0.46□□□□□ -2.34
CLK1P49759 Y_RNA.593-201ENST00000410292 98 ntBASIC0.46□□□□□ -2.34
CLK1P49759 RNU6-402P-201ENST00000410678 103 ntBASIC0.46□□□□□ -2.34
CLK1P49759 Y_RNA.620-201ENST00000411009 88 ntBASIC0.46□□□□□ -2.34
CLK1P49759 RNU6-267P-201ENST00000516714 103 ntBASIC0.46□□□□□ -2.34
CLK1P49759 AL078603.1-201ENST00000603824 313 ntBASIC0.46□□□□□ -2.34
CLK1P49759 AL162376.1-201ENST00000624117 175 ntBASIC0.46□□□□□ -2.34
CLK1P49759 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
CLK1P49759 RNU6-294P-201ENST00000364999 102 ntBASIC0.45□□□□□ -2.34
CLK1P49759 RNY1P4-201ENST00000384595 115 ntBASIC0.45□□□□□ -2.34
CLK1P49759 RNA5SP292-201ENST00000390974 118 ntBASIC0.45□□□□□ -2.34
CLK1P49759 RNA5SP227-201ENST00000516184 113 ntBASIC0.45□□□□□ -2.34
CLK1P49759 RNU6-287P-201ENST00000516230 98 ntBASIC0.45□□□□□ -2.34
CLK1P49759 AC104996.3-201ENST00000590718 94 ntBASIC0.45□□□□□ -2.34
CLK1P49759 SNORA25.18-201ENST00000607153 114 ntBASIC0.45□□□□□ -2.34
CLK1P49759 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
CLK1P49759 Y_RNA.17-201ENST00000362433 111 ntBASIC0.44□□□□□ -2.34
CLK1P49759 RNU6-633P-201ENST00000362612 103 ntBASIC0.44□□□□□ -2.34
CLK1P49759 RNU6-811P-201ENST00000384069 107 ntBASIC0.44□□□□□ -2.34
CLK1P49759 SNORD116-22-201ENST00000384430 92 ntBASIC0.44□□□□□ -2.34
CLK1P49759 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.44□□□□□ -2.34
CLK1P49759 MIR2113-201ENST00000459007 91 ntBASIC0.44□□□□□ -2.34
CLK1P49759 RNU1-29P-201ENST00000606574 126 ntBASIC0.44□□□□□ -2.34
CLK1P49759 MIR617-201ENST00000385030 97 ntBASIC0.43□□□□□ -2.34
CLK1P49759 MIR518A1-201ENST00000385068 85 ntBASIC0.43□□□□□ -2.34
CLK1P49759 MIR519E-201ENST00000385075 84 ntBASIC0.43□□□□□ -2.34
CLK1P49759 RNU6-269P-201ENST00000391077 97 ntBASIC0.43□□□□□ -2.34
CLK1P49759 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
CLK1P49759 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
CLK1P49759 MIR6513-201ENST00000621188 64 ntBASIC0.43□□□□□ -2.34
CLK1P49759 RNU4-32P-201ENST00000363404 141 ntBASIC0.42□□□□□ -2.34
CLK1P49759 RNU6-1134P-201ENST00000365156 101 ntBASIC0.42□□□□□ -2.34
CLK1P49759 SNORD90-201ENST00000391145 111 ntBASIC0.42□□□□□ -2.34
CLK1P49759 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CLK1P49759 RNU6-935P-201ENST00000410371 100 ntBASIC0.42□□□□□ -2.34
CLK1P49759 AC093423.1-201ENST00000440817 142 ntBASIC0.42□□□□□ -2.34
CLK1P49759 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.42□□□□□ -2.34
CLK1P49759 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
CLK1P49759 RNU6-509P-201ENST00000363519 107 ntBASIC0.41□□□□□ -2.34
CLK1P49759 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
CLK1P49759 Y_RNA.491-201ENST00000384417 107 ntBASIC0.41□□□□□ -2.34
CLK1P49759 Y_RNA.508-201ENST00000384502 114 ntBASIC0.41□□□□□ -2.34
CLK1P49759 MIR548U-201ENST00000390728 81 ntBASIC0.41□□□□□ -2.34
CLK1P49759 MIR548L-201ENST00000408303 86 ntBASIC0.41□□□□□ -2.34
CLK1P49759 AC098934.3-201ENST00000430450 190 ntBASIC0.41□□□□□ -2.34
CLK1P49759 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
CLK1P49759 RNU7-153P-201ENST00000516455 62 ntBASIC0.41□□□□□ -2.34
CLK1P49759 SNORA18.5-201ENST00000516616 101 ntBASIC0.41□□□□□ -2.34
CLK1P49759 Y_RNA.239-201ENST00000364444 113 ntBASIC0.4□□□□□ -2.35
CLK1P49759 RNU6-42P-201ENST00000384165 107 ntBASIC0.4□□□□□ -2.35
CLK1P49759 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
CLK1P49759 Y_RNA.558-201ENST00000384685 113 ntBASIC0.4□□□□□ -2.35
CLK1P49759 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CLK1P49759 RNA5SP247-201ENST00000411181 105 ntBASIC0.4□□□□□ -2.35
CLK1P49759 AC069271.1-201ENST00000445577 156 ntBASIC0.4□□□□□ -2.35
CLK1P49759 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
CLK1P49759 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.4□□□□□ -2.35
CLK1P49759 RNU6-762P-201ENST00000517107 102 ntBASIC0.4□□□□□ -2.35
CLK1P49759 MIR4752-201ENST00000579672 72 ntBASIC0.4□□□□□ -2.35
CLK1P49759 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.4□□□□□ -2.35
CLK1P49759 MIR519C-201ENST00000385053 87 ntBASIC0.39□□□□□ -2.35
CLK1P49759 MIR451A-201ENST00000385059 72 ntBASIC0.39□□□□□ -2.35
CLK1P49759 MIR1236-201ENST00000408340 102 ntBASIC0.39□□□□□ -2.35
CLK1P49759 RNA5SP484-201ENST00000458857 111 ntBASIC0.39□□□□□ -2.35
CLK1P49759 RNA5SP134-201ENST00000516492 96 ntBASIC0.39□□□□□ -2.35
CLK1P49759 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.39□□□□□ -2.35
CLK1P49759 MIR6755-201ENST00000619993 66 ntBASIC0.39□□□□□ -2.35
CLK1P49759 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.39□□□□□ -2.35
CLK1P49759 MIR548BB-201ENST00000626714 66 ntBASIC0.39□□□□□ -2.35
CLK1P49759 Y_RNA.73-201ENST00000362910 113 ntBASIC0.38□□□□□ -2.35
CLK1P49759 SNORD71-201ENST00000411292 86 ntBASIC0.38□□□□□ -2.35
CLK1P49759 RNU7-74P-201ENST00000459104 62 ntBASIC0.38□□□□□ -2.35
CLK1P49759 MIR4796-201ENST00000580742 81 ntBASIC0.38□□□□□ -2.35
CLK1P49759 SNORA70.25-201ENST00000612741 95 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms