Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 MTRNR2L2-201ENST00000604882 87 ntBASIC0.91□□□□□ -2.26
THBS3P49746 MIR4662A-201ENST00000637499 67 ntBASIC0.91□□□□□ -2.26
THBS3P49746 Y_RNA.596-201ENST00000410462 109 ntBASIC0.9□□□□□ -2.27
THBS3P49746 FGF7P7-201ENST00000514120 227 ntBASIC0.9□□□□□ -2.27
THBS3P49746 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
THBS3P49746 RNU6-1229P-201ENST00000364295 107 ntBASIC0.89□□□□□ -2.27
THBS3P49746 RNU6-686P-201ENST00000364839 107 ntBASIC0.89□□□□□ -2.27
THBS3P49746 RNU6-1051P-201ENST00000365471 102 ntBASIC0.89□□□□□ -2.27
THBS3P49746 Y_RNA.532-201ENST00000384590 113 ntBASIC0.89□□□□□ -2.27
THBS3P49746 SNORD77.2-201ENST00000391045 68 ntBASIC0.89□□□□□ -2.27
THBS3P49746 SNORD124-201ENST00000459577 104 ntBASIC0.89□□□□□ -2.27
THBS3P49746 AC087343.1-201ENST00000477341 475 ntBASIC0.89□□□□□ -2.27
THBS3P49746 MIR3140-201ENST00000583685 90 ntBASIC0.89□□□□□ -2.27
THBS3P49746 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.89□□□□□ -2.27
THBS3P49746 Y_RNA.788-201ENST00000622394 112 ntBASIC0.89□□□□□ -2.27
THBS3P49746 RNU6-1094P-201ENST00000362416 104 ntBASIC0.88□□□□□ -2.27
THBS3P49746 RNU6-208P-201ENST00000362431 107 ntBASIC0.88□□□□□ -2.27
THBS3P49746 SNORD115-24-201ENST00000363528 82 ntBASIC0.88□□□□□ -2.27
THBS3P49746 Y_RNA.207-201ENST00000364142 106 ntBASIC0.88□□□□□ -2.27
THBS3P49746 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.88□□□□□ -2.27
THBS3P49746 snoU13.17-201ENST00000458802 104 ntBASIC0.88□□□□□ -2.27
THBS3P49746 AC145423.2-201ENST00000610631 239 ntBASIC0.88□□□□□ -2.27
THBS3P49746 MIR96-201ENST00000362288 78 ntBASIC0.87□□□□□ -2.27
THBS3P49746 Y_RNA.174-201ENST00000363781 105 ntBASIC0.87□□□□□ -2.27
THBS3P49746 SNORD114-22-201ENST00000365423 72 ntBASIC0.87□□□□□ -2.27
THBS3P49746 RNU6-1335P-201ENST00000365426 107 ntBASIC0.87□□□□□ -2.27
THBS3P49746 MIR19B1-201ENST00000384829 87 ntBASIC0.87□□□□□ -2.27
THBS3P49746 MIR644A-201ENST00000385262 94 ntBASIC0.87□□□□□ -2.27
THBS3P49746 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
THBS3P49746 RNU6-1052P-201ENST00000411398 104 ntBASIC0.87□□□□□ -2.27
THBS3P49746 SCARNA18B-201ENST00000458806 135 ntBASIC0.87□□□□□ -2.27
THBS3P49746 AC002350.1-201ENST00000490759 375 ntBASIC0.87□□□□□ -2.27
THBS3P49746 Y_RNA.660-201ENST00000516002 120 ntBASIC0.87□□□□□ -2.27
THBS3P49746 RNU6-1110P-201ENST00000516462 101 ntBASIC0.87□□□□□ -2.27
THBS3P49746 RNU6-719P-201ENST00000516671 104 ntBASIC0.87□□□□□ -2.27
THBS3P49746 RNU7-161P-201ENST00000517289 62 ntBASIC0.87□□□□□ -2.27
THBS3P49746 AL136317.1-201ENST00000612653 226 ntBASIC0.87□□□□□ -2.27
THBS3P49746 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.87□□□□□ -2.27
THBS3P49746 RNA5SP403-201ENST00000363598 108 ntBASIC0.86□□□□□ -2.27
THBS3P49746 MIR451A-201ENST00000385059 72 ntBASIC0.86□□□□□ -2.27
THBS3P49746 MIR942-201ENST00000401111 86 ntBASIC0.86□□□□□ -2.27
THBS3P49746 RNU6-935P-201ENST00000410371 100 ntBASIC0.86□□□□□ -2.27
THBS3P49746 RNU6-287P-201ENST00000516230 98 ntBASIC0.86□□□□□ -2.27
THBS3P49746 MIR4484-201ENST00000582855 83 ntBASIC0.86□□□□□ -2.27
THBS3P49746 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
THBS3P49746 RNU5F-1-201ENST00000362507 117 ntBASIC0.85□□□□□ -2.27
THBS3P49746 SNORD114-27-201ENST00000363766 70 ntBASIC0.85□□□□□ -2.27
THBS3P49746 FABP5P4-201ENST00000437203 171 ntBASIC0.85□□□□□ -2.27
THBS3P49746 U7.4-201ENST00000614961 63 ntBASIC0.85□□□□□ -2.27
THBS3P49746 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.85□□□□□ -2.27
THBS3P49746 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
THBS3P49746 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
THBS3P49746 RNA5SP117-201ENST00000365294 118 ntBASIC0.84□□□□□ -2.27
THBS3P49746 U7.7-201ENST00000459276 60 ntBASIC0.84□□□□□ -2.27
THBS3P49746 RNU7-104P-201ENST00000459398 79 ntBASIC0.84□□□□□ -2.27
THBS3P49746 RNU7-13P-201ENST00000516413 62 ntBASIC0.84□□□□□ -2.27
THBS3P49746 MIR548AG2-201ENST00000581228 64 ntBASIC0.84□□□□□ -2.27
THBS3P49746 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
THBS3P49746 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.84□□□□□ -2.27
THBS3P49746 Y_RNA.12-201ENST00000362393 112 ntBASIC0.83□□□□□ -2.28
THBS3P49746 Y_RNA.264-201ENST00000364665 102 ntBASIC0.83□□□□□ -2.28
THBS3P49746 RNU6-1126P-201ENST00000384002 107 ntBASIC0.83□□□□□ -2.28
THBS3P49746 SNORA24B-201ENST00000384176 131 ntBASIC0.83□□□□□ -2.28
THBS3P49746 Y_RNA.565-201ENST00000384719 101 ntBASIC0.83□□□□□ -2.28
THBS3P49746 RNU6-380P-201ENST00000410207 107 ntBASIC0.83□□□□□ -2.28
THBS3P49746 MIR2113-201ENST00000459007 91 ntBASIC0.83□□□□□ -2.28
THBS3P49746 RNA5SP404-201ENST00000517118 132 ntBASIC0.83□□□□□ -2.28
THBS3P49746 MIR3134-201ENST00000579433 74 ntBASIC0.83□□□□□ -2.28
THBS3P49746 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.83□□□□□ -2.28
THBS3P49746 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
THBS3P49746 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
THBS3P49746 RNY4P3-201ENST00000365254 95 ntBASIC0.82□□□□□ -2.28
THBS3P49746 SNORD115-44-201ENST00000365391 82 ntBASIC0.82□□□□□ -2.28
THBS3P49746 Y_RNA.371-201ENST00000365591 113 ntBASIC0.82□□□□□ -2.28
THBS3P49746 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
THBS3P49746 MIR7-2-201ENST00000384970 110 ntBASIC0.82□□□□□ -2.28
THBS3P49746 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
THBS3P49746 RNU6-1057P-201ENST00000517162 102 ntBASIC0.82□□□□□ -2.28
THBS3P49746 MIR3920-201ENST00000581751 86 ntBASIC0.82□□□□□ -2.28
THBS3P49746 MIR6515-201ENST00000619843 57 ntBASIC0.82□□□□□ -2.28
THBS3P49746 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
THBS3P49746 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
THBS3P49746 MIR573-201ENST00000384964 99 ntBASIC0.81□□□□□ -2.28
THBS3P49746 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
THBS3P49746 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.81□□□□□ -2.28
THBS3P49746 RNU6-303P-201ENST00000517091 106 ntBASIC0.81□□□□□ -2.28
THBS3P49746 YWHAEP2-201ENST00000580066 112 ntBASIC0.81□□□□□ -2.28
THBS3P49746 YWHAEP3-201ENST00000582767 121 ntBASIC0.81□□□□□ -2.28
THBS3P49746 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
THBS3P49746 RNU6-824P-201ENST00000363724 104 ntBASIC0.8□□□□□ -2.28
THBS3P49746 RNU1-124P-201ENST00000363861 145 ntBASIC0.8□□□□□ -2.28
THBS3P49746 SNORD28-201ENST00000384706 75 ntBASIC0.8□□□□□ -2.28
THBS3P49746 MIR520E-201ENST00000384867 87 ntBASIC0.8□□□□□ -2.28
THBS3P49746 AC074348.1-201ENST00000426503 132 ntBASIC0.8□□□□□ -2.28
THBS3P49746 AC073261.1-201ENST00000429409 121 ntBASIC0.8□□□□□ -2.28
THBS3P49746 RNU6-469P-201ENST00000516253 101 ntBASIC0.8□□□□□ -2.28
THBS3P49746 RNU6-523P-201ENST00000516304 54 ntBASIC0.8□□□□□ -2.28
THBS3P49746 RNU6-807P-201ENST00000516805 107 ntBASIC0.8□□□□□ -2.28
THBS3P49746 MIR3612-201ENST00000579753 87 ntBASIC0.8□□□□□ -2.28
THBS3P49746 AC244669.1-204ENST00000621564 178 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms