Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 MIR518E-201ENST00000385252 88 ntBASIC0.59□□□□□ -2.31
RFX2P48378 MIR548U-201ENST00000390728 81 ntBASIC0.59□□□□□ -2.31
RFX2P48378 AL603825.1-201ENST00000438481 80 ntBASIC0.59□□□□□ -2.31
RFX2P48378 RNU7-153P-201ENST00000516455 62 ntBASIC0.59□□□□□ -2.31
RFX2P48378 MIR548AG2-201ENST00000581228 64 ntBASIC0.59□□□□□ -2.31
RFX2P48378 AC092634.7-201ENST00000621022 103 ntBASIC0.59□□□□□ -2.31
RFX2P48378 MIR6828-201ENST00000636181 60 ntBASIC0.59□□□□□ -2.31
RFX2P48378 RNU6-509P-201ENST00000363519 107 ntBASIC0.58□□□□□ -2.32
RFX2P48378 RNU6-1126P-201ENST00000384002 107 ntBASIC0.58□□□□□ -2.32
RFX2P48378 Y_RNA.491-201ENST00000384417 107 ntBASIC0.58□□□□□ -2.32
RFX2P48378 MIR519C-201ENST00000385053 87 ntBASIC0.58□□□□□ -2.32
RFX2P48378 SNORD41.1-201ENST00000391000 69 ntBASIC0.58□□□□□ -2.32
RFX2P48378 MIR1236-201ENST00000408340 102 ntBASIC0.58□□□□□ -2.32
RFX2P48378 SNORA18.5-201ENST00000516616 101 ntBASIC0.58□□□□□ -2.32
RFX2P48378 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
RFX2P48378 MIR7107-201ENST00000611489 80 ntBASIC0.58□□□□□ -2.32
RFX2P48378 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.58□□□□□ -2.32
RFX2P48378 MIR450A2-201ENST00000385022 100 ntBASIC0.57□□□□□ -2.32
RFX2P48378 Y_RNA.611-201ENST00000410682 108 ntBASIC0.57□□□□□ -2.32
RFX2P48378 MIR2113-201ENST00000459007 91 ntBASIC0.57□□□□□ -2.32
RFX2P48378 MIR3124-201ENST00000582636 67 ntBASIC0.57□□□□□ -2.32
RFX2P48378 AC062037.1-201ENST00000605302 128 ntBASIC0.57□□□□□ -2.32
RFX2P48378 MIR548BB-201ENST00000626714 66 ntBASIC0.57□□□□□ -2.32
RFX2P48378 SNORD114-27-201ENST00000363766 70 ntBASIC0.56□□□□□ -2.32
RFX2P48378 RNU6-935P-201ENST00000410371 100 ntBASIC0.56□□□□□ -2.32
RFX2P48378 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.56□□□□□ -2.32
RFX2P48378 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
RFX2P48378 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
RFX2P48378 MIR451A-201ENST00000385059 72 ntBASIC0.55□□□□□ -2.32
RFX2P48378 RNU6-269P-201ENST00000391077 97 ntBASIC0.55□□□□□ -2.32
RFX2P48378 RNU6-1057P-201ENST00000517162 102 ntBASIC0.55□□□□□ -2.32
RFX2P48378 MIR4796-201ENST00000580742 81 ntBASIC0.55□□□□□ -2.32
RFX2P48378 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.55□□□□□ -2.32
RFX2P48378 RNU6-497P-201ENST00000365316 104 ntBASIC0.54□□□□□ -2.32
RFX2P48378 MIR617-201ENST00000385030 97 ntBASIC0.54□□□□□ -2.32
RFX2P48378 MIR519E-201ENST00000385075 84 ntBASIC0.54□□□□□ -2.32
RFX2P48378 SNORD90-201ENST00000391145 111 ntBASIC0.54□□□□□ -2.32
RFX2P48378 AC022137.1-201ENST00000483735 151 ntBASIC0.54□□□□□ -2.32
RFX2P48378 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
RFX2P48378 MIR6835-201ENST00000621552 64 ntBASIC0.54□□□□□ -2.32
RFX2P48378 MIR373-201ENST00000362273 69 ntBASIC0.53□□□□□ -2.32
RFX2P48378 SNORD115-37-201ENST00000363768 82 ntBASIC0.53□□□□□ -2.32
RFX2P48378 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
RFX2P48378 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
RFX2P48378 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
RFX2P48378 SNORA40.8-201ENST00000411034 126 ntBASIC0.53□□□□□ -2.32
RFX2P48378 RNU6-1052P-201ENST00000411398 104 ntBASIC0.53□□□□□ -2.32
RFX2P48378 FGF7P7-201ENST00000514120 227 ntBASIC0.53□□□□□ -2.32
RFX2P48378 RN7SKP12-201ENST00000516275 143 ntBASIC0.53□□□□□ -2.32
RFX2P48378 RNU6-719P-201ENST00000516671 104 ntBASIC0.53□□□□□ -2.32
RFX2P48378 RNA5SP102-201ENST00000516865 106 ntBASIC0.53□□□□□ -2.32
RFX2P48378 MIR4752-201ENST00000579672 72 ntBASIC0.53□□□□□ -2.32
RFX2P48378 SNORA26.2-201ENST00000390922 122 ntBASIC0.52□□□□□ -2.33
RFX2P48378 SNORD71-201ENST00000411292 86 ntBASIC0.52□□□□□ -2.33
RFX2P48378 AC069271.1-201ENST00000445577 156 ntBASIC0.52□□□□□ -2.33
RFX2P48378 RNU7-74P-201ENST00000459104 62 ntBASIC0.52□□□□□ -2.33
RFX2P48378 AC093729.1-201ENST00000513074 128 ntBASIC0.52□□□□□ -2.33
RFX2P48378 MIR3140-201ENST00000583685 90 ntBASIC0.52□□□□□ -2.33
RFX2P48378 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
RFX2P48378 AL162376.1-201ENST00000624117 175 ntBASIC0.52□□□□□ -2.33
RFX2P48378 SNORD118-201ENST00000363593 134 ntBASIC0.51□□□□□ -2.33
RFX2P48378 Y_RNA.388-201ENST00000383919 113 ntBASIC0.51□□□□□ -2.33
RFX2P48378 MIR518A1-201ENST00000385068 85 ntBASIC0.51□□□□□ -2.33
RFX2P48378 RNY4P29-201ENST00000410801 97 ntBASIC0.51□□□□□ -2.33
RFX2P48378 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
RFX2P48378 RNA5SP484-201ENST00000458857 111 ntBASIC0.51□□□□□ -2.33
RFX2P48378 SNORA25.13-201ENST00000516395 103 ntBASIC0.51□□□□□ -2.33
RFX2P48378 MIR5588-201ENST00000581890 63 ntBASIC0.51□□□□□ -2.33
RFX2P48378 RNU6-1051P-201ENST00000365471 102 ntBASIC0.5□□□□□ -2.33
RFX2P48378 RNU6-820P-201ENST00000384273 107 ntBASIC0.5□□□□□ -2.33
RFX2P48378 MIR6767-201ENST00000637302 66 ntBASIC0.5□□□□□ -2.33
RFX2P48378 AC006160.2-201ENST00000637708 154 ntBASIC0.5□□□□□ -2.33
RFX2P48378 RNU6-979P-201ENST00000383896 107 ntBASIC0.49□□□□□ -2.33
RFX2P48378 RNU6-592P-201ENST00000411333 103 ntBASIC0.49□□□□□ -2.33
RFX2P48378 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
RFX2P48378 NAMPTP3-201ENST00000569273 224 ntBASIC0.49□□□□□ -2.33
RFX2P48378 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RFX2P48378 RNU1-141P-201ENST00000364623 158 ntBASIC0.48□□□□□ -2.33
RFX2P48378 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
RFX2P48378 SNORA63.2-201ENST00000362603 126 ntBASIC0.47□□□□□ -2.33
RFX2P48378 SNORA25.9-201ENST00000365087 128 ntBASIC0.47□□□□□ -2.33
RFX2P48378 Y_RNA.423-201ENST00000384057 113 ntBASIC0.47□□□□□ -2.33
RFX2P48378 Y_RNA.426-201ENST00000384068 113 ntBASIC0.47□□□□□ -2.33
RFX2P48378 RNU6-242P-201ENST00000384359 107 ntBASIC0.47□□□□□ -2.33
RFX2P48378 MIR508-201ENST00000384857 115 ntBASIC0.47□□□□□ -2.33
RFX2P48378 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
RFX2P48378 AC093423.1-201ENST00000440817 142 ntBASIC0.47□□□□□ -2.33
RFX2P48378 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
RFX2P48378 AC140658.3-201ENST00000567603 271 ntBASIC0.47□□□□□ -2.33
RFX2P48378 SNORA70.25-201ENST00000612741 95 ntBASIC0.47□□□□□ -2.33
RFX2P48378 MIR6504-201ENST00000613520 61 ntBASIC0.47□□□□□ -2.33
RFX2P48378 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.47□□□□□ -2.33
RFX2P48378 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
RFX2P48378 MIR96-201ENST00000362288 78 ntBASIC0.46□□□□□ -2.34
RFX2P48378 RNA5SP173-201ENST00000364857 136 ntBASIC0.46□□□□□ -2.34
RFX2P48378 RNY4P3-201ENST00000365254 95 ntBASIC0.46□□□□□ -2.34
RFX2P48378 RNU6-1276P-201ENST00000365372 104 ntBASIC0.46□□□□□ -2.34
RFX2P48378 MIR1302-4-201ENST00000408701 150 ntBASIC0.46□□□□□ -2.34
RFX2P48378 MIR1276-201ENST00000408707 83 ntBASIC0.46□□□□□ -2.34
RFX2P48378 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms