Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNU7-197P-201ENST00000458836 62 ntBASIC-1.1□□□□□ -2.59
SSR1P43307 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.1□□□□□ -2.59
SSR1P43307 SNORD38.1-201ENST00000363863 68 ntBASIC-1.11□□□□□ -2.59
SSR1P43307 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.11□□□□□ -2.59
SSR1P43307 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.11□□□□□ -2.59
SSR1P43307 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.11□□□□□ -2.59
SSR1P43307 MIR548E-201ENST00000408287 88 ntBASIC-1.11□□□□□ -2.59
SSR1P43307 RNU7-55P-201ENST00000459426 62 ntBASIC-1.11□□□□□ -2.59
SSR1P43307 RNU6-138P-201ENST00000515952 107 ntBASIC-1.11□□□□□ -2.59
SSR1P43307 RNU6-502P-201ENST00000362419 108 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 MIR548D2-201ENST00000384955 97 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 RNU6-721P-201ENST00000410155 105 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 RNU6-719P-201ENST00000516671 104 ntBASIC-1.12□□□□□ -2.59
SSR1P43307 RNU6-363P-201ENST00000362895 105 ntBASIC-1.13□□□□□ -2.59
SSR1P43307 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.13□□□□□ -2.59
SSR1P43307 MIR451A-201ENST00000385059 72 ntBASIC-1.13□□□□□ -2.59
SSR1P43307 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
SSR1P43307 RNU6-781P-201ENST00000516377 101 ntBASIC-1.13□□□□□ -2.59
SSR1P43307 MIR3681-201ENST00000580089 72 ntBASIC-1.13□□□□□ -2.59
SSR1P43307 RNU6-151P-201ENST00000364158 107 ntBASIC-1.14□□□□□ -2.59
SSR1P43307 RNU6-476P-201ENST00000384726 107 ntBASIC-1.14□□□□□ -2.59
SSR1P43307 RNU6-935P-201ENST00000410371 100 ntBASIC-1.14□□□□□ -2.59
SSR1P43307 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.14□□□□□ -2.59
SSR1P43307 AL118496.2-201ENST00000448300 230 ntBASIC-1.14□□□□□ -2.59
SSR1P43307 SNORD42B-201ENST00000458893 67 ntBASIC-1.14□□□□□ -2.59
SSR1P43307 MIR8068-201ENST00000618032 68 ntBASIC-1.14□□□□□ -2.59
SSR1P43307 RNU6-235P-201ENST00000362644 107 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 RNU6-861P-201ENST00000516745 106 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 AP001328.1-201ENST00000528550 176 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.15□□□□□ -2.59
SSR1P43307 MTND5P18-201ENST00000445624 1801 ntBASIC-1.16□□□□□ -2.6
SSR1P43307 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.16□□□□□ -2.6
SSR1P43307 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.16□□□□□ -2.6
SSR1P43307 RNU6-409P-201ENST00000384114 104 ntBASIC-1.16□□□□□ -2.6
SSR1P43307 RNU6-574P-201ENST00000384265 107 ntBASIC-1.16□□□□□ -2.6
SSR1P43307 SNORD83B-201ENST00000386745 93 ntBASIC-1.16□□□□□ -2.6
SSR1P43307 SNORA63-201ENST00000363450 132 ntBASIC-1.17□□□□□ -2.6
SSR1P43307 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.17□□□□□ -2.6
SSR1P43307 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.17□□□□□ -2.6
SSR1P43307 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.17□□□□□ -2.6
SSR1P43307 MIR3179-1-201ENST00000578940 84 ntBASIC-1.17□□□□□ -2.6
SSR1P43307 MIR3179-2-201ENST00000579107 84 ntBASIC-1.17□□□□□ -2.6
SSR1P43307 MIR3179-3-201ENST00000579566 84 ntBASIC-1.17□□□□□ -2.6
SSR1P43307 MIR3179-4-201ENST00000617599 84 ntBASIC-1.17□□□□□ -2.6
SSR1P43307 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 MIR518B-201ENST00000385127 83 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 MIR1302-3-201ENST00000408128 138 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.18□□□□□ -2.6
SSR1P43307 RNU6-75P-201ENST00000515944 104 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 AL442128.1-201ENST00000615151 90 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 AC025521.1-201ENST00000621624 286 ntBASIC-1.18□□□□□ -2.6
SSR1P43307 SNORD114-25-201ENST00000363742 72 ntBASIC-1.19□□□□□ -2.6
SSR1P43307 SNORD114-15-201ENST00000364687 72 ntBASIC-1.19□□□□□ -2.6
SSR1P43307 FGF7P7-201ENST00000514120 227 ntBASIC-1.19□□□□□ -2.6
SSR1P43307 AC072026.1-201ENST00000605023 201 ntBASIC-1.19□□□□□ -2.6
SSR1P43307 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.2□□□□□ -2.6
SSR1P43307 AL500527.2-201ENST00000454105 95 ntBASIC-1.2□□□□□ -2.6
SSR1P43307 SNORD22.1-201ENST00000516331 125 ntBASIC-1.2□□□□□ -2.6
SSR1P43307 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.21□□□□□ -2.6
SSR1P43307 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.21□□□□□ -2.6
SSR1P43307 RNU6-816P-201ENST00000390914 107 ntBASIC-1.21□□□□□ -2.6
SSR1P43307 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.21□□□□□ -2.6
SSR1P43307 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.21□□□□□ -2.6
SSR1P43307 SNORA40.17-201ENST00000517256 115 ntBASIC-1.21□□□□□ -2.6
SSR1P43307 MIR548AX-201ENST00000580117 73 ntBASIC-1.21□□□□□ -2.6
SSR1P43307 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.22□□□□□ -2.6
SSR1P43307 RNU6-973P-201ENST00000364690 107 ntBASIC-1.22□□□□□ -2.6
SSR1P43307 SCARNA17-201ENST00000516183 144 ntBASIC-1.22□□□□□ -2.6
SSR1P43307 RNA5SP395-201ENST00000516567 118 ntBASIC-1.22□□□□□ -2.6
SSR1P43307 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.22□□□□□ -2.6
SSR1P43307 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.22□□□□□ -2.6
SSR1P43307 RNU6-682P-201ENST00000363843 106 ntBASIC-1.23□□□□□ -2.61
SSR1P43307 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.23□□□□□ -2.61
SSR1P43307 RNA5SP136-201ENST00000410906 107 ntBASIC-1.23□□□□□ -2.61
SSR1P43307 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.23□□□□□ -2.61
SSR1P43307 RNU6-327P-201ENST00000516270 127 ntBASIC-1.23□□□□□ -2.61
SSR1P43307 MIR4503-201ENST00000582187 83 ntBASIC-1.23□□□□□ -2.61
SSR1P43307 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.24□□□□□ -2.61
SSR1P43307 RNU6-647P-201ENST00000364243 107 ntBASIC-1.24□□□□□ -2.61
SSR1P43307 MIR517B-201ENST00000385102 67 ntBASIC-1.24□□□□□ -2.61
SSR1P43307 MIR216B-201ENST00000390186 82 ntBASIC-1.24□□□□□ -2.61
SSR1P43307 RNA5SP272-201ENST00000516095 111 ntBASIC-1.24□□□□□ -2.61
SSR1P43307 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.24□□□□□ -2.61
SSR1P43307 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms