Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 Y_RNA.601-201ENST00000410500 113 ntBASIC0.22□□□□□ -2.37
SOX3P41225 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.22□□□□□ -2.37
SOX3P41225 RNU7-85P-201ENST00000458851 63 ntBASIC0.22□□□□□ -2.37
SOX3P41225 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SOX3P41225 AC096720.1-201ENST00000604441 183 ntBASIC0.22□□□□□ -2.37
SOX3P41225 MTRNR2L2-201ENST00000604882 87 ntBASIC0.22□□□□□ -2.37
SOX3P41225 MIR519E-201ENST00000385075 84 ntBASIC0.21□□□□□ -2.38
SOX3P41225 MIR548L-201ENST00000408303 86 ntBASIC0.21□□□□□ -2.38
SOX3P41225 RNA5SP484-201ENST00000458857 111 ntBASIC0.21□□□□□ -2.38
SOX3P41225 RNU6-287P-201ENST00000516230 98 ntBASIC0.21□□□□□ -2.38
SOX3P41225 SNORA62.5-201ENST00000516634 120 ntBASIC0.21□□□□□ -2.38
SOX3P41225 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
SOX3P41225 MIR8087-201ENST00000612745 78 ntBASIC0.21□□□□□ -2.38
SOX3P41225 SNORD45B-201ENST00000364617 72 ntBASIC0.2□□□□□ -2.38
SOX3P41225 Y_RNA.283-201ENST00000364798 112 ntBASIC0.2□□□□□ -2.38
SOX3P41225 RNU6-215P-201ENST00000365169 102 ntBASIC0.2□□□□□ -2.38
SOX3P41225 AC093423.1-201ENST00000440817 142 ntBASIC0.2□□□□□ -2.38
SOX3P41225 SCARNA23-201ENST00000516060 130 ntBASIC0.2□□□□□ -2.38
SOX3P41225 RNU7-13P-201ENST00000516413 62 ntBASIC0.2□□□□□ -2.38
SOX3P41225 MIR4514-201ENST00000581410 57 ntBASIC0.2□□□□□ -2.38
SOX3P41225 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.2□□□□□ -2.38
SOX3P41225 MIR499B-201ENST00000636498 73 ntBASIC0.2□□□□□ -2.38
SOX3P41225 MIR450A1-201ENST00000362262 91 ntBASIC0.19□□□□□ -2.38
SOX3P41225 SNORA63.4-201ENST00000362763 126 ntBASIC0.19□□□□□ -2.38
SOX3P41225 Y_RNA.207-201ENST00000364142 106 ntBASIC0.19□□□□□ -2.38
SOX3P41225 SNORA51.5-201ENST00000384126 131 ntBASIC0.19□□□□□ -2.38
SOX3P41225 RNU6-813P-201ENST00000384691 107 ntBASIC0.19□□□□□ -2.38
SOX3P41225 MIR501-201ENST00000390204 84 ntBASIC0.19□□□□□ -2.38
SOX3P41225 RNU6-644P-201ENST00000391155 98 ntBASIC0.19□□□□□ -2.38
SOX3P41225 Y_RNA.629-201ENST00000411368 105 ntBASIC0.19□□□□□ -2.38
SOX3P41225 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
SOX3P41225 MIR4696-201ENST00000581431 70 ntBASIC0.19□□□□□ -2.38
SOX3P41225 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.19□□□□□ -2.38
SOX3P41225 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
SOX3P41225 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
SOX3P41225 RNU6-1125P-201ENST00000363601 107 ntBASIC0.18□□□□□ -2.38
SOX3P41225 RNA5SP325-201ENST00000363756 130 ntBASIC0.18□□□□□ -2.38
SOX3P41225 RNU4-36P-201ENST00000364294 144 ntBASIC0.18□□□□□ -2.38
SOX3P41225 Y_RNA.291-201ENST00000364886 113 ntBASIC0.18□□□□□ -2.38
SOX3P41225 RNU6-480P-201ENST00000384332 107 ntBASIC0.18□□□□□ -2.38
SOX3P41225 MIR760-201ENST00000390220 80 ntBASIC0.18□□□□□ -2.38
SOX3P41225 MIR548H2-201ENST00000408874 88 ntBASIC0.18□□□□□ -2.38
SOX3P41225 HMGN2P22-201ENST00000427588 175 ntBASIC0.18□□□□□ -2.38
SOX3P41225 MIR2113-201ENST00000459007 91 ntBASIC0.18□□□□□ -2.38
SOX3P41225 Y_RNA.648-201ENST00000459455 110 ntBASIC0.18□□□□□ -2.38
SOX3P41225 NAMPTP3-201ENST00000569273 224 ntBASIC0.18□□□□□ -2.38
SOX3P41225 MIR4439-201ENST00000583746 80 ntBASIC0.18□□□□□ -2.38
SOX3P41225 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
SOX3P41225 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
SOX3P41225 Y_RNA.115-201ENST00000363272 98 ntBASIC0.17□□□□□ -2.38
SOX3P41225 RNU6-132P-201ENST00000383863 107 ntBASIC0.17□□□□□ -2.38
SOX3P41225 RNU6-756P-201ENST00000383997 107 ntBASIC0.17□□□□□ -2.38
SOX3P41225 MIR1302-5-201ENST00000408164 150 ntBASIC0.17□□□□□ -2.38
SOX3P41225 Y_RNA.596-201ENST00000410462 109 ntBASIC0.17□□□□□ -2.38
SOX3P41225 RNU7-61P-201ENST00000515897 61 ntBASIC0.17□□□□□ -2.38
SOX3P41225 RNA5SP330-201ENST00000517096 96 ntBASIC0.17□□□□□ -2.38
SOX3P41225 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
SOX3P41225 RNU6-766P-201ENST00000362478 107 ntBASIC0.16□□□□□ -2.38
SOX3P41225 RNU6-755P-201ENST00000364400 103 ntBASIC0.16□□□□□ -2.38
SOX3P41225 RNU1-141P-201ENST00000364623 158 ntBASIC0.16□□□□□ -2.38
SOX3P41225 RNA5SP128-201ENST00000365305 116 ntBASIC0.16□□□□□ -2.38
SOX3P41225 RNU6-1081P-201ENST00000384537 107 ntBASIC0.16□□□□□ -2.38
SOX3P41225 MIR617-201ENST00000385030 97 ntBASIC0.16□□□□□ -2.38
SOX3P41225 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
SOX3P41225 RNU6-127P-201ENST00000390897 107 ntBASIC0.16□□□□□ -2.38
SOX3P41225 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
SOX3P41225 MIRLET7F1-201ENST00000362202 87 ntBASIC0.15□□□□□ -2.39
SOX3P41225 RNU6-664P-201ENST00000362381 107 ntBASIC0.15□□□□□ -2.39
SOX3P41225 Y_RNA.258-201ENST00000364613 105 ntBASIC0.15□□□□□ -2.39
SOX3P41225 SNORD58A-201ENST00000383875 65 ntBASIC0.15□□□□□ -2.39
SOX3P41225 RNU6-44P-201ENST00000384045 107 ntBASIC0.15□□□□□ -2.39
SOX3P41225 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
SOX3P41225 RNU7-129P-201ENST00000516128 62 ntBASIC0.15□□□□□ -2.39
SOX3P41225 MIR5706-201ENST00000579841 80 ntBASIC0.15□□□□□ -2.39
SOX3P41225 MIR3925-201ENST00000584674 77 ntBASIC0.15□□□□□ -2.39
SOX3P41225 AL109933.3-201ENST00000619095 188 ntBASIC0.15□□□□□ -2.39
SOX3P41225 Y_RNA.10-201ENST00000362371 110 ntBASIC0.14□□□□□ -2.39
SOX3P41225 SNORD115-44-201ENST00000365391 82 ntBASIC0.14□□□□□ -2.39
SOX3P41225 SNORD101-201ENST00000384027 73 ntBASIC0.14□□□□□ -2.39
SOX3P41225 RNU6-466P-201ENST00000391224 103 ntBASIC0.14□□□□□ -2.39
SOX3P41225 SNORD110-201ENST00000408189 75 ntBASIC0.14□□□□□ -2.39
SOX3P41225 SNORD4B-201ENST00000459083 72 ntBASIC0.14□□□□□ -2.39
SOX3P41225 RNU6-162P-201ENST00000516228 103 ntBASIC0.14□□□□□ -2.39
SOX3P41225 AC073869.9-201ENST00000641610 120 ntBASIC0.14□□□□□ -2.39
SOX3P41225 Y_RNA.190-201ENST00000363964 101 ntBASIC0.13□□□□□ -2.39
SOX3P41225 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
SOX3P41225 SNORD90-201ENST00000391145 111 ntBASIC0.13□□□□□ -2.39
SOX3P41225 RNA5SP63-201ENST00000391225 112 ntBASIC0.13□□□□□ -2.39
SOX3P41225 MIR1197-201ENST00000408818 88 ntBASIC0.13□□□□□ -2.39
SOX3P41225 MIR4677-201ENST00000584153 80 ntBASIC0.13□□□□□ -2.39
SOX3P41225 MIR548AD-201ENST00000584780 82 ntBASIC0.13□□□□□ -2.39
SOX3P41225 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.13□□□□□ -2.39
SOX3P41225 Y_RNA.107-201ENST00000363190 121 ntBASIC0.12□□□□□ -2.39
SOX3P41225 RNU6-509P-201ENST00000363519 107 ntBASIC0.12□□□□□ -2.39
SOX3P41225 RNU6-147P-201ENST00000383983 107 ntBASIC0.12□□□□□ -2.39
SOX3P41225 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
SOX3P41225 RNU6-887P-201ENST00000410660 100 ntBASIC0.12□□□□□ -2.39
SOX3P41225 AL035461.1-201ENST00000421490 332 ntBASIC0.12□□□□□ -2.39
SOX3P41225 AC006210.1-201ENST00000424882 111 ntBASIC0.12□□□□□ -2.39
SOX3P41225 RNU7-74P-201ENST00000459104 62 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms