Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNY4P20-201ENST00000516678 93 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 MIR4801-201ENST00000582704 82 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 AC138207.3-201ENST00000585289 166 ntBASIC-0.91□□□□□ -2.56
COL18A1P39060 RNU6-502P-201ENST00000362419 108 ntBASIC-0.92□□□□□ -2.56
COL18A1P39060 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.92□□□□□ -2.56
COL18A1P39060 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.92□□□□□ -2.56
COL18A1P39060 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.92□□□□□ -2.56
COL18A1P39060 SNORD54-201ENST00000459159 67 ntBASIC-0.92□□□□□ -2.56
COL18A1P39060 U6.100-201ENST00000636230 99 ntBASIC-0.92□□□□□ -2.56
COL18A1P39060 AL512310.12-203ENST00000640543 90 ntBASIC-0.92□□□□□ -2.56
COL18A1P39060 SNORD114-25-201ENST00000363742 72 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 MIR548O2-201ENST00000616090 70 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 SNORD115-19-201ENST00000363098 82 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 SNORD115-18-201ENST00000363293 82 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 SNORD115-17-201ENST00000364612 82 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 MIR548H3-201ENST00000408771 118 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 MIR3179-1-201ENST00000578940 84 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 MIR3179-2-201ENST00000579107 84 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 MIR3179-3-201ENST00000579566 84 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 MIR3179-4-201ENST00000617599 84 ntBASIC-0.93□□□□□ -2.56
COL18A1P39060 MTND5P18-201ENST00000445624 1801 ntBASIC-0.94□□□□□ -2.56
COL18A1P39060 RNU6-226P-201ENST00000363778 107 ntBASIC-0.94□□□□□ -2.56
COL18A1P39060 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.94□□□□□ -2.56
COL18A1P39060 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.94□□□□□ -2.56
COL18A1P39060 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.94□□□□□ -2.56
COL18A1P39060 RNU6-957P-201ENST00000363652 99 ntBASIC-0.95□□□□□ -2.56
COL18A1P39060 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.95□□□□□ -2.56
COL18A1P39060 SNORD101-201ENST00000384027 73 ntBASIC-0.95□□□□□ -2.56
COL18A1P39060 AL161932.1-201ENST00000437408 146 ntBASIC-0.95□□□□□ -2.56
COL18A1P39060 snoU13.13-201ENST00000458842 104 ntBASIC-0.95□□□□□ -2.56
COL18A1P39060 MIR3163-201ENST00000581592 73 ntBASIC-0.95□□□□□ -2.56
COL18A1P39060 RNU6-86P-201ENST00000606534 107 ntBASIC-0.95□□□□□ -2.56
COL18A1P39060 RNU6-508P-201ENST00000363231 103 ntBASIC-0.96□□□□□ -2.56
COL18A1P39060 RNU6-973P-201ENST00000364690 107 ntBASIC-0.96□□□□□ -2.56
COL18A1P39060 U3.27-201ENST00000391237 200 ntBASIC-0.96□□□□□ -2.56
COL18A1P39060 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.96□□□□□ -2.56
COL18A1P39060 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.96□□□□□ -2.56
COL18A1P39060 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.96□□□□□ -2.56
COL18A1P39060 MIR4696-201ENST00000581431 70 ntBASIC-0.96□□□□□ -2.56
COL18A1P39060 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.96□□□□□ -2.56
COL18A1P39060 MIR6854-201ENST00000614935 69 ntBASIC-0.96□□□□□ -2.56
COL18A1P39060 SNORD127-201ENST00000458892 86 ntBASIC-0.97□□□□□ -2.56
COL18A1P39060 AC026421.1-201ENST00000519101 163 ntBASIC-0.97□□□□□ -2.56
COL18A1P39060 SNORD38.1-201ENST00000363863 68 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 SNORD58.1-201ENST00000391313 66 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 MIR548G-201ENST00000408442 89 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 MIR4770-201ENST00000579149 58 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 AC145423.2-201ENST00000610631 239 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 SNORD37.2-201ENST00000391075 66 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 RNU6-721P-201ENST00000410155 105 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.98□□□□□ -2.57
COL18A1P39060 RNU6-983P-201ENST00000516004 103 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.98□□□□□ -2.57
COL18A1P39060 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 SNORA49-201ENST00000386157 136 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 RNU6-239P-201ENST00000390990 99 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 RNU6-918P-201ENST00000391219 106 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 RNA5SP272-201ENST00000516095 111 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 SNORD22.1-201ENST00000516331 125 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 MIR5591-201ENST00000578248 65 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 AC108081.1-201ENST00000604358 221 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 snoR1.1-201ENST00000628177 80 ntBASIC-0.99□□□□□ -2.57
COL18A1P39060 RNU6-235P-201ENST00000362644 107 ntBASIC-1□□□□□ -2.57
COL18A1P39060 Y_RNA.239-201ENST00000364444 113 ntBASIC-1□□□□□ -2.57
COL18A1P39060 Y_RNA.535-201ENST00000384612 99 ntBASIC-1□□□□□ -2.57
COL18A1P39060 Y_RNA.574-201ENST00000384766 95 ntBASIC-1□□□□□ -2.57
COL18A1P39060 RNU6-466P-201ENST00000391224 103 ntBASIC-1□□□□□ -2.57
COL18A1P39060 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1□□□□□ -2.57
COL18A1P39060 MIR3121-201ENST00000579680 77 ntBASIC-1□□□□□ -2.57
COL18A1P39060 DNAJC19P2-201ENST00000593340 302 ntBASIC-1□□□□□ -2.57
COL18A1P39060 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 SNORA7.5-201ENST00000410672 110 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 MTND2P23-201ENST00000422990 651 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 AL500527.2-201ENST00000454105 95 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 RNU6-363P-201ENST00000362895 105 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 AC022137.1-201ENST00000483735 151 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 AC044792.1-201ENST00000593294 196 ntBASIC-1.01□□□□□ -2.57
COL18A1P39060 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.02□□□□□ -2.57
COL18A1P39060 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.02□□□□□ -2.57
COL18A1P39060 RNU6-476P-201ENST00000384726 107 ntBASIC-1.02□□□□□ -2.57
COL18A1P39060 RNU4-71P-201ENST00000516258 113 ntBASIC-1.02□□□□□ -2.57
COL18A1P39060 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.02□□□□□ -2.57
COL18A1P39060 RNU7-121P-201ENST00000516604 62 ntBASIC-1.02□□□□□ -2.57
COL18A1P39060 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.02□□□□□ -2.57
COL18A1P39060 MIR1255B1-201ENST00000636325 63 ntBASIC-1.02□□□□□ -2.57
COL18A1P39060 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 323 ms