Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.43□□□□□ -2.48
HOXD13P35453 MTND4LP9-201ENST00000427694 174 ntBASIC-0.43□□□□□ -2.48
HOXD13P35453 RNU7-200P-201ENST00000516105 62 ntBASIC-0.43□□□□□ -2.48
HOXD13P35453 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
HOXD13P35453 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.44□□□□□ -2.48
HOXD13P35453 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.44□□□□□ -2.48
HOXD13P35453 SNORA32.3-201ENST00000384772 121 ntBASIC-0.44□□□□□ -2.48
HOXD13P35453 RNU6-794P-201ENST00000517261 64 ntBASIC-0.44□□□□□ -2.48
HOXD13P35453 MIR4645-201ENST00000583158 77 ntBASIC-0.44□□□□□ -2.48
HOXD13P35453 AC090425.1-201ENST00000610007 140 ntBASIC-0.44□□□□□ -2.48
HOXD13P35453 RN7SL660P-201ENST00000614852 299 ntBASIC-0.44□□□□□ -2.48
HOXD13P35453 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.45□□□□□ -2.48
HOXD13P35453 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.45□□□□□ -2.48
HOXD13P35453 AL353813.1-201ENST00000440700 253 ntBASIC-0.45□□□□□ -2.48
HOXD13P35453 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.45□□□□□ -2.48
HOXD13P35453 MIR8064-201ENST00000612863 90 ntBASIC-0.45□□□□□ -2.48
HOXD13P35453 MIR4788-201ENST00000639104 80 ntBASIC-0.45□□□□□ -2.48
HOXD13P35453 RNU6-957P-201ENST00000363652 99 ntBASIC-0.46□□□□□ -2.48
HOXD13P35453 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.46□□□□□ -2.48
HOXD13P35453 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.46□□□□□ -2.48
HOXD13P35453 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.46□□□□□ -2.48
HOXD13P35453 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.46□□□□□ -2.48
HOXD13P35453 AL161932.1-201ENST00000437408 146 ntBASIC-0.46□□□□□ -2.48
HOXD13P35453 MIR4802-201ENST00000581881 80 ntBASIC-0.46□□□□□ -2.48
HOXD13P35453 AL157777.2-201ENST00000258070 137 ntBASIC-0.47□□□□□ -2.48
HOXD13P35453 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.47□□□□□ -2.48
HOXD13P35453 MT-TY-201ENST00000387409 66 ntBASIC-0.47□□□□□ -2.48
HOXD13P35453 RNU6-284P-201ENST00000411105 106 ntBASIC-0.47□□□□□ -2.48
HOXD13P35453 AC244250.2-201ENST00000418731 148 ntBASIC-0.47□□□□□ -2.48
HOXD13P35453 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
HOXD13P35453 uc_338.36-201ENST00000622331 158 ntBASIC-0.47□□□□□ -2.48
HOXD13P35453 U6.100-201ENST00000636230 99 ntBASIC-0.47□□□□□ -2.48
HOXD13P35453 RNA5SP98-201ENST00000363158 137 ntBASIC-0.48□□□□□ -2.49
HOXD13P35453 RNU6-811P-201ENST00000384069 107 ntBASIC-0.48□□□□□ -2.49
HOXD13P35453 RNU6-154P-201ENST00000384306 106 ntBASIC-0.48□□□□□ -2.49
HOXD13P35453 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.48□□□□□ -2.49
HOXD13P35453 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.48□□□□□ -2.49
HOXD13P35453 MIR6507-201ENST00000613630 70 ntBASIC-0.48□□□□□ -2.49
HOXD13P35453 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 SNORD114-28-201ENST00000363610 72 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 SNORD114-11-201ENST00000363738 75 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 SNORD101-201ENST00000384027 73 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 RNU6-772P-201ENST00000516042 105 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 MIR4679-2-201ENST00000578358 77 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 MIR548AE1-201ENST00000583292 70 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.49□□□□□ -2.49
HOXD13P35453 MIR655-201ENST00000362159 97 ntBASIC-0.5□□□□□ -2.49
HOXD13P35453 RPS29P8-201ENST00000445109 171 ntBASIC-0.5□□□□□ -2.49
HOXD13P35453 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.5□□□□□ -2.49
HOXD13P35453 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.5□□□□□ -2.49
HOXD13P35453 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.51□□□□□ -2.49
HOXD13P35453 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.51□□□□□ -2.49
HOXD13P35453 RNU6-257P-201ENST00000410238 98 ntBASIC-0.51□□□□□ -2.49
HOXD13P35453 MIR4694-201ENST00000578534 80 ntBASIC-0.51□□□□□ -2.49
HOXD13P35453 MIR5589-201ENST00000579442 60 ntBASIC-0.51□□□□□ -2.49
HOXD13P35453 MIR4432-201ENST00000581823 84 ntBASIC-0.51□□□□□ -2.49
HOXD13P35453 RNU6-664P-201ENST00000362381 107 ntBASIC-0.52□□□□□ -2.49
HOXD13P35453 RNA5SP205-201ENST00000364653 136 ntBASIC-0.52□□□□□ -2.49
HOXD13P35453 RNY1P5-201ENST00000383890 115 ntBASIC-0.52□□□□□ -2.49
HOXD13P35453 AC114755.3-201ENST00000481111 251 ntBASIC-0.52□□□□□ -2.49
HOXD13P35453 MIR4636-201ENST00000582271 80 ntBASIC-0.52□□□□□ -2.49
HOXD13P35453 AP001180.6-201ENST00000584918 159 ntBASIC-0.52□□□□□ -2.49
HOXD13P35453 AL590491.3-201ENST00000610731 82 ntBASIC-0.52□□□□□ -2.49
HOXD13P35453 AL391099.1-201ENST00000624635 187 ntBASIC-0.52□□□□□ -2.49
HOXD13P35453 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.53□□□□□ -2.49
HOXD13P35453 AC007012.1-201ENST00000567192 175 ntBASIC-0.53□□□□□ -2.49
HOXD13P35453 MIR20A-201ENST00000362279 71 ntBASIC-0.54□□□□□ -2.5
HOXD13P35453 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.54□□□□□ -2.5
HOXD13P35453 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.54□□□□□ -2.5
HOXD13P35453 MIR4493-201ENST00000584016 73 ntBASIC-0.54□□□□□ -2.5
HOXD13P35453 RNU6-455P-201ENST00000384681 107 ntBASIC-0.55□□□□□ -2.5
HOXD13P35453 RNU6-935P-201ENST00000410371 100 ntBASIC-0.55□□□□□ -2.5
HOXD13P35453 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.55□□□□□ -2.5
HOXD13P35453 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.55□□□□□ -2.5
HOXD13P35453 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.55□□□□□ -2.5
HOXD13P35453 RNU6-175P-201ENST00000516896 107 ntBASIC-0.55□□□□□ -2.5
HOXD13P35453 MIR4696-201ENST00000581431 70 ntBASIC-0.55□□□□□ -2.5
HOXD13P35453 MIR4436A-201ENST00000585278 85 ntBASIC-0.55□□□□□ -2.5
HOXD13P35453 MIR577-201ENST00000385196 96 ntBASIC-0.56□□□□□ -2.5
HOXD13P35453 SNORD75.1-201ENST00000408373 60 ntBASIC-0.56□□□□□ -2.5
HOXD13P35453 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.56□□□□□ -2.5
HOXD13P35453 snoU13.11-201ENST00000459219 104 ntBASIC-0.56□□□□□ -2.5
HOXD13P35453 MIR4439-201ENST00000583746 80 ntBASIC-0.56□□□□□ -2.5
HOXD13P35453 MIR101-1-201ENST00000362265 75 ntBASIC-0.57□□□□□ -2.5
HOXD13P35453 RNY3P2-201ENST00000362918 102 ntBASIC-0.57□□□□□ -2.5
HOXD13P35453 RNU6-832P-201ENST00000363319 107 ntBASIC-0.57□□□□□ -2.5
HOXD13P35453 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.57□□□□□ -2.5
HOXD13P35453 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.57□□□□□ -2.5
HOXD13P35453 AC068339.1-201ENST00000526965 141 ntBASIC-0.57□□□□□ -2.5
HOXD13P35453 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.58□□□□□ -2.5
HOXD13P35453 RNU6-65P-201ENST00000516332 98 ntBASIC-0.58□□□□□ -2.5
HOXD13P35453 AP000676.1-201ENST00000533307 52 ntBASIC-0.58□□□□□ -2.5
HOXD13P35453 RNU6-80P-201ENST00000384195 107 ntBASIC-0.59□□□□□ -2.5
HOXD13P35453 MIR652-201ENST00000385278 98 ntBASIC-0.59□□□□□ -2.5
HOXD13P35453 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
HOXD13P35453 AC244090.1-201ENST00000441884 93 ntBASIC-0.59□□□□□ -2.5
HOXD13P35453 RNU6-255P-201ENST00000516957 105 ntBASIC-0.59□□□□□ -2.5
HOXD13P35453 RNA5SP66-201ENST00000517178 101 ntBASIC-0.59□□□□□ -2.5
HOXD13P35453 U6.95-201ENST00000636931 70 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 322.9 ms