Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MIR635-201ENST00000384830 98 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 RNU6-466P-201ENST00000391224 103 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 SNORD83.1-201ENST00000411362 77 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 RNU7-195P-201ENST00000458793 62 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 TRAJ51-201ENST00000504127 63 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 RNA5SP255-201ENST00000516370 107 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 AC023827.1-201ENST00000569247 97 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 MIR3134-201ENST00000579433 74 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 MIR3064-201ENST00000581130 66 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 AC104996.3-201ENST00000590718 94 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.88□□□□□ -2.27
HOXC13P31276 MIR101-2-201ENST00000362195 79 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 Y_RNA.13-201ENST00000362403 112 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 RNU6-110P-201ENST00000384508 104 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 Y_RNA.536-201ENST00000384621 113 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 RNU6-788P-201ENST00000390967 104 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HOXC13P31276 SNORD100-201ENST00000408573 76 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 MIR18B-201ENST00000454574 71 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 RNU7-185P-201ENST00000459215 60 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 RNU6-557P-201ENST00000516842 110 ntBASIC0.87□□□□□ -2.27
HOXC13P31276 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.87□□□□□ -2.27
HOXC13P31276 Y_RNA.532-201ENST00000384590 113 ntBASIC0.86□□□□□ -2.27
HOXC13P31276 MIR548U-201ENST00000390728 81 ntBASIC0.86□□□□□ -2.27
HOXC13P31276 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.86□□□□□ -2.27
HOXC13P31276 RNU6-1194P-201ENST00000516208 104 ntBASIC0.86□□□□□ -2.27
HOXC13P31276 RNU6-523P-201ENST00000516304 54 ntBASIC0.86□□□□□ -2.27
HOXC13P31276 SNORD92-201ENST00000585078 85 ntBASIC0.86□□□□□ -2.27
HOXC13P31276 MIR664A-201ENST00000626086 82 ntBASIC0.86□□□□□ -2.27
HOXC13P31276 MIR377-201ENST00000362145 69 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 RNU6-208P-201ENST00000362431 107 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 RNU6-580P-201ENST00000365159 107 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 SNORD77.2-201ENST00000391045 68 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 MIR1257-201ENST00000408490 117 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 RNU6-380P-201ENST00000410207 107 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 snoU13.17-201ENST00000458802 104 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 MIR4771-2-201ENST00000577758 74 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 MIR4771-1-201ENST00000582617 74 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 MIR6082-201ENST00000613604 109 ntBASIC0.85□□□□□ -2.27
HOXC13P31276 RNU6-934P-201ENST00000365154 107 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
HOXC13P31276 SNORD111-201ENST00000408139 94 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 AC092628.1-201ENST00000436250 252 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 FGF7P7-201ENST00000514120 227 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 Y_RNA.809-201ENST00000516058 95 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 RNU6-70P-201ENST00000516438 60 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 Y_RNA.697-201ENST00000516776 113 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 RNU6-448P-201ENST00000517052 107 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 MIR548H5-201ENST00000580314 60 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 AC025627.3-201ENST00000582078 182 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 TRDV1-202ENST00000621643 102 ntBASIC0.84□□□□□ -2.27
HOXC13P31276 Y_RNA.12-201ENST00000362393 112 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 RNU6-411P-201ENST00000384451 107 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 MIR936-201ENST00000401264 98 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 RNA5SP193-201ENST00000410353 107 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 RNU6-1052P-201ENST00000411398 104 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 AC067940.1-201ENST00000458411 300 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 AC114801.3-201ENST00000510231 177 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 Y_RNA.660-201ENST00000516002 120 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 RNU6-719P-201ENST00000516671 104 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 RNU6-1015P-201ENST00000517121 99 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 MIR3140-201ENST00000583685 90 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 AC106800.4-201ENST00000614905 153 ntBASIC0.83□□□□□ -2.28
HOXC13P31276 Y_RNA.56-201ENST00000362798 112 ntBASIC0.82□□□□□ -2.28
HOXC13P31276 RNU6-1051P-201ENST00000365471 102 ntBASIC0.82□□□□□ -2.28
HOXC13P31276 Y_RNA.371-201ENST00000365591 113 ntBASIC0.82□□□□□ -2.28
HOXC13P31276 MIR125B2-201ENST00000385128 89 ntBASIC0.82□□□□□ -2.28
HOXC13P31276 RNU7-156P-201ENST00000517214 74 ntBASIC0.82□□□□□ -2.28
HOXC13P31276 AC036111.3-201ENST00000526389 112 ntBASIC0.82□□□□□ -2.28
HOXC13P31276 AL136317.1-201ENST00000612653 226 ntBASIC0.82□□□□□ -2.28
HOXC13P31276 U6.100-201ENST00000636230 99 ntBASIC0.82□□□□□ -2.28
HOXC13P31276 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
HOXC13P31276 RNU6-664P-201ENST00000362381 107 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 RNU6-1260P-201ENST00000362944 107 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 RNU6-330P-201ENST00000363015 107 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 Y_RNA.207-201ENST00000364142 106 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 RNA5SP245-201ENST00000364239 121 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 Y_RNA.239-201ENST00000364444 113 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 Y_RNA.258-201ENST00000364613 105 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 Y_RNA.264-201ENST00000364665 102 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 MIR599-201ENST00000385069 95 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 MIR520H-201ENST00000385126 88 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 SNORD89-201ENST00000390981 114 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 RNU6-994P-201ENST00000410507 111 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 Y_RNA.681-201ENST00000516445 113 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 RNU6-807P-201ENST00000516805 107 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 MIR4696-201ENST00000581431 70 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 RNU7-10P-201ENST00000607194 63 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 MIR6513-201ENST00000621188 64 ntBASIC0.81□□□□□ -2.28
HOXC13P31276 SNORD101-201ENST00000384027 73 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 RNU6-364P-201ENST00000384387 107 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 RNU6-535P-201ENST00000384722 107 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
HOXC13P31276 MIR193B-201ENST00000384907 83 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 279.5 ms