Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MIR6734-201ENST00000621166 68 ntBASIC0.74□□□□□ -2.29
CD40P25942 Y_RNA.43-201ENST00000362670 111 ntBASIC0.73□□□□□ -2.29
CD40P25942 RNU6-1255P-201ENST00000363434 112 ntBASIC0.73□□□□□ -2.29
CD40P25942 RNU6-811P-201ENST00000384069 107 ntBASIC0.73□□□□□ -2.29
CD40P25942 SNORD41.1-201ENST00000391000 69 ntBASIC0.73□□□□□ -2.29
CD40P25942 snoU13.18-201ENST00000459483 104 ntBASIC0.73□□□□□ -2.29
CD40P25942 RNU6-287P-201ENST00000516230 98 ntBASIC0.73□□□□□ -2.29
CD40P25942 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CD40P25942 Y_RNA.207-201ENST00000364142 106 ntBASIC0.72□□□□□ -2.29
CD40P25942 Y_RNA.239-201ENST00000364444 113 ntBASIC0.72□□□□□ -2.29
CD40P25942 RNU6-1126P-201ENST00000384002 107 ntBASIC0.72□□□□□ -2.29
CD40P25942 MIR548U-201ENST00000390728 81 ntBASIC0.72□□□□□ -2.29
CD40P25942 Y_RNA.620-201ENST00000411009 88 ntBASIC0.72□□□□□ -2.29
CD40P25942 RNU6-1223P-201ENST00000517124 104 ntBASIC0.72□□□□□ -2.29
CD40P25942 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
CD40P25942 Y_RNA.17-201ENST00000362433 111 ntBASIC0.71□□□□□ -2.3
CD40P25942 Y_RNA.118-201ENST00000363300 101 ntBASIC0.71□□□□□ -2.3
CD40P25942 RNU6-945P-201ENST00000383947 107 ntBASIC0.71□□□□□ -2.3
CD40P25942 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.71□□□□□ -2.3
CD40P25942 SNORA40.8-201ENST00000411034 126 ntBASIC0.71□□□□□ -2.3
CD40P25942 MIR2113-201ENST00000459007 91 ntBASIC0.71□□□□□ -2.3
CD40P25942 RNU6-267P-201ENST00000516714 103 ntBASIC0.71□□□□□ -2.3
CD40P25942 MIR3064-201ENST00000581130 66 ntBASIC0.71□□□□□ -2.3
CD40P25942 MIR548AG2-201ENST00000581228 64 ntBASIC0.71□□□□□ -2.3
CD40P25942 AC104996.3-201ENST00000590718 94 ntBASIC0.71□□□□□ -2.3
CD40P25942 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.71□□□□□ -2.3
CD40P25942 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
CD40P25942 RNU6-219P-201ENST00000364728 107 ntBASIC0.7□□□□□ -2.3
CD40P25942 RNA5SP292-201ENST00000390974 118 ntBASIC0.7□□□□□ -2.3
CD40P25942 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CD40P25942 SNORD71-201ENST00000411292 86 ntBASIC0.7□□□□□ -2.3
CD40P25942 SNORD115-27-201ENST00000364430 82 ntBASIC0.69□□□□□ -2.3
CD40P25942 Y_RNA.593-201ENST00000410292 98 ntBASIC0.69□□□□□ -2.3
CD40P25942 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
CD40P25942 RNU6-633P-201ENST00000362612 103 ntBASIC0.68□□□□□ -2.3
CD40P25942 SNORD118-201ENST00000363593 134 ntBASIC0.68□□□□□ -2.3
CD40P25942 Y_RNA.491-201ENST00000384417 107 ntBASIC0.68□□□□□ -2.3
CD40P25942 Y_RNA.558-201ENST00000384685 113 ntBASIC0.68□□□□□ -2.3
CD40P25942 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CD40P25942 RNU6-269P-201ENST00000391077 97 ntBASIC0.68□□□□□ -2.3
CD40P25942 RNU6-935P-201ENST00000410371 100 ntBASIC0.68□□□□□ -2.3
CD40P25942 RNU6-1057P-201ENST00000517162 102 ntBASIC0.68□□□□□ -2.3
CD40P25942 AC006254.2-201ENST00000603259 279 ntBASIC0.68□□□□□ -2.3
CD40P25942 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
CD40P25942 MIR617-201ENST00000385030 97 ntBASIC0.67□□□□□ -2.3
CD40P25942 MIR519C-201ENST00000385053 87 ntBASIC0.67□□□□□ -2.3
CD40P25942 MIR518A1-201ENST00000385068 85 ntBASIC0.67□□□□□ -2.3
CD40P25942 MIR1236-201ENST00000408340 102 ntBASIC0.67□□□□□ -2.3
CD40P25942 RNU7-74P-201ENST00000459104 62 ntBASIC0.67□□□□□ -2.3
CD40P25942 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
CD40P25942 AL162376.1-201ENST00000624117 175 ntBASIC0.67□□□□□ -2.3
CD40P25942 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
CD40P25942 MIR519E-201ENST00000385075 84 ntBASIC0.66□□□□□ -2.3
CD40P25942 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
CD40P25942 SNORA18.5-201ENST00000516616 101 ntBASIC0.66□□□□□ -2.3
CD40P25942 AC018659.1-201ENST00000551083 169 ntBASIC0.66□□□□□ -2.3
CD40P25942 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
CD40P25942 RNU6-509P-201ENST00000363519 107 ntBASIC0.65□□□□□ -2.31
CD40P25942 RNU6-675P-201ENST00000384236 104 ntBASIC0.65□□□□□ -2.31
CD40P25942 MIR489-201ENST00000384923 84 ntBASIC0.65□□□□□ -2.31
CD40P25942 MIR451A-201ENST00000385059 72 ntBASIC0.65□□□□□ -2.31
CD40P25942 AC069271.1-201ENST00000445577 156 ntBASIC0.65□□□□□ -2.31
CD40P25942 MIR7111-201ENST00000619751 72 ntBASIC0.65□□□□□ -2.31
CD40P25942 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.65□□□□□ -2.31
CD40P25942 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
CD40P25942 RNU7-153P-201ENST00000516455 62 ntBASIC0.64□□□□□ -2.31
CD40P25942 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
CD40P25942 MIR4752-201ENST00000579672 72 ntBASIC0.64□□□□□ -2.31
CD40P25942 IGLL4P-201ENST00000614590 133 ntBASIC0.64□□□□□ -2.31
CD40P25942 RNY1P1-201ENST00000364372 112 ntBASIC0.63□□□□□ -2.31
CD40P25942 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
CD40P25942 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
CD40P25942 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.63□□□□□ -2.31
CD40P25942 MIR6515-201ENST00000619843 57 ntBASIC0.63□□□□□ -2.31
CD40P25942 MIR494-201ENST00000349529 81 ntBASIC0.62□□□□□ -2.31
CD40P25942 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
CD40P25942 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
CD40P25942 MIR4796-201ENST00000580742 81 ntBASIC0.62□□□□□ -2.31
CD40P25942 SNORD115-37-201ENST00000363768 82 ntBASIC0.61□□□□□ -2.31
CD40P25942 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
CD40P25942 Y_RNA.611-201ENST00000410682 108 ntBASIC0.61□□□□□ -2.31
CD40P25942 RNA5SP484-201ENST00000458857 111 ntBASIC0.61□□□□□ -2.31
CD40P25942 FGF7P7-201ENST00000514120 227 ntBASIC0.61□□□□□ -2.31
CD40P25942 RNU6-762P-201ENST00000517107 102 ntBASIC0.61□□□□□ -2.31
CD40P25942 MIR548BB-201ENST00000626714 66 ntBASIC0.61□□□□□ -2.31
CD40P25942 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CD40P25942 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
CD40P25942 Y_RNA.73-201ENST00000362910 113 ntBASIC0.6□□□□□ -2.31
CD40P25942 MIR450A2-201ENST00000385022 100 ntBASIC0.6□□□□□ -2.31
CD40P25942 MIR146A-201ENST00000385201 99 ntBASIC0.6□□□□□ -2.31
CD40P25942 RNU2-59P-201ENST00000410482 191 ntBASIC0.6□□□□□ -2.31
CD40P25942 RNU6-1052P-201ENST00000411398 104 ntBASIC0.6□□□□□ -2.31
CD40P25942 SNORA68.3-201ENST00000515906 83 ntBASIC0.6□□□□□ -2.31
CD40P25942 RNU6-719P-201ENST00000516671 104 ntBASIC0.6□□□□□ -2.31
CD40P25942 AC073869.9-201ENST00000641610 120 ntBASIC0.6□□□□□ -2.31
CD40P25942 RNU6-497P-201ENST00000365316 104 ntBASIC0.59□□□□□ -2.31
CD40P25942 SNORD90-201ENST00000391145 111 ntBASIC0.59□□□□□ -2.31
CD40P25942 NAMPTP3-201ENST00000569273 224 ntBASIC0.59□□□□□ -2.31
CD40P25942 RNU1-141P-201ENST00000364623 158 ntBASIC0.58□□□□□ -2.32
CD40P25942 RNU6-1051P-201ENST00000365471 102 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms