Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-972P-201ENST00000391208 107 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 RNU6-887P-201ENST00000410660 100 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.22□□□□□ -2.37
COL5A1P20908 RNU6-75P-201ENST00000515944 104 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 Y_RNA.659-201ENST00000515994 113 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 RNA5SP94-201ENST00000516917 108 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 RNA5SP47-201ENST00000517230 109 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 AC141557.1-201ENST00000540982 400 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 RNU6-86P-201ENST00000606534 107 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 SNORA36.1-201ENST00000363424 132 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 RNU6-1014P-201ENST00000383940 103 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 MIR181B2-201ENST00000385004 89 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 RNY4P18-201ENST00000391107 89 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 SNORA40.8-201ENST00000411034 126 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 SPINT5P-201ENST00000448174 155 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 U6.100-201ENST00000636230 99 ntBASIC0.22□□□□□ -2.37
COL5A1P20908 RNU6-957P-201ENST00000363652 99 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 Y_RNA.185-201ENST00000363894 100 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 MIR599-201ENST00000385069 95 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 MIR216B-201ENST00000390186 82 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 SNORD41.1-201ENST00000391000 69 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 RNU2-59P-201ENST00000410482 191 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 RNU7-106P-201ENST00000459514 67 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 SNORA40.13-201ENST00000516379 120 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 MIR4667-201ENST00000578933 66 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
COL5A1P20908 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.21□□□□□ -2.38
COL5A1P20908 MIR450A1-201ENST00000362262 91 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 SNORA63.4-201ENST00000362763 126 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 Y_RNA.95-201ENST00000363079 95 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 Y_RNA.173-201ENST00000363776 113 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 SNORD116-10-201ENST00000363791 102 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 Y_RNA.190-201ENST00000363964 101 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-215P-201ENST00000365169 102 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-945P-201ENST00000383947 107 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-1113P-201ENST00000384348 107 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MTATP8P2-201ENST00000435212 202 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.2□□□□□ -2.38
COL5A1P20908 AC109327.2-201ENST00000448339 378 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 SNRPGP12-201ENST00000449481 213 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 AL031737.1-201ENST00000450125 223 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-848P-201ENST00000515948 107 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-617P-201ENST00000516147 107 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-473P-201ENST00000516164 107 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-1049P-201ENST00000516414 107 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 Y_RNA.705-201ENST00000516862 110 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MIR4777-201ENST00000583710 86 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 AC025521.1-201ENST00000621624 286 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MIR6828-201ENST00000636181 60 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MIRLET7F1-201ENST00000362202 87 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 Y_RNA.107-201ENST00000363190 121 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-755P-201ENST00000364400 103 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-905P-201ENST00000384434 107 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-291P-201ENST00000384720 107 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MIR590-201ENST00000385008 97 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 SNORD71-201ENST00000411292 86 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MIR5706-201ENST00000579841 80 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MIR4493-201ENST00000584016 73 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
COL5A1P20908 RNU6-766P-201ENST00000362478 107 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 Y_RNA.93-201ENST00000363066 109 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 Y_RNA.239-201ENST00000364444 113 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 RNA5SP517-201ENST00000364724 117 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 RNU6-524P-201ENST00000384270 107 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 Y_RNA.649-201ENST00000459077 103 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 snoU13.11-201ENST00000459219 104 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.19□□□□□ -2.38
COL5A1P20908 SNORD44.1-201ENST00000363202 61 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 RNY4P30-201ENST00000410216 95 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 AL353813.1-201ENST00000440700 253 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 SNORA68.3-201ENST00000515906 83 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 Y_RNA.809-201ENST00000516058 95 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 RNU6-904P-201ENST00000516206 101 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 RNU6-795P-201ENST00000516323 103 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 RNU6-1057P-201ENST00000517162 102 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 AP001180.6-201ENST00000584918 159 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 uc_338.28-201ENST00000612082 187 ntBASIC0.18□□□□□ -2.38
COL5A1P20908 SNORD115-24-201ENST00000363528 82 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 SNORD95.1-201ENST00000364099 68 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 RNA5SP89-201ENST00000410300 108 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 MTATP6P29-201ENST00000415057 132 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 RNU7-85P-201ENST00000458851 63 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 RNU7-74P-201ENST00000459104 62 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 RNU6-1265P-201ENST00000516342 103 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 RNU7-13P-201ENST00000516413 62 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 SCARNA16.5-201ENST00000517114 183 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 AC108676.2-201ENST00000605225 163 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 MIR760-201ENST00000390220 80 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 AL035461.1-201ENST00000421490 332 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 AL161932.1-201ENST00000437408 146 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 SNORD4B-201ENST00000459083 72 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 RNU7-104P-201ENST00000459398 79 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms