Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 MIR924-201ENST00000638017 53 ntBASIC0.56□□□□□ -2.32
RXRAP19793 RNU6-957P-201ENST00000363652 99 ntBASIC0.55□□□□□ -2.32
RXRAP19793 Y_RNA.190-201ENST00000363964 101 ntBASIC0.55□□□□□ -2.32
RXRAP19793 Y_RNA.283-201ENST00000364798 112 ntBASIC0.55□□□□□ -2.32
RXRAP19793 SNORD28-201ENST00000384706 75 ntBASIC0.55□□□□□ -2.32
RXRAP19793 RNY1P7-201ENST00000384743 110 ntBASIC0.55□□□□□ -2.32
RXRAP19793 RNU7-104P-201ENST00000459398 79 ntBASIC0.55□□□□□ -2.32
RXRAP19793 RNU6-1265P-201ENST00000516342 103 ntBASIC0.55□□□□□ -2.32
RXRAP19793 AC092634.7-201ENST00000621022 103 ntBASIC0.55□□□□□ -2.32
RXRAP19793 AC244669.1-204ENST00000621564 178 ntBASIC0.55□□□□□ -2.32
RXRAP19793 TRDV1-202ENST00000621643 102 ntBASIC0.55□□□□□ -2.32
RXRAP19793 RNU6-1298P-201ENST00000362456 101 ntBASIC0.54□□□□□ -2.32
RXRAP19793 RNA5SP403-201ENST00000363598 108 ntBASIC0.54□□□□□ -2.32
RXRAP19793 RNU6-519P-201ENST00000410590 108 ntBASIC0.54□□□□□ -2.32
RXRAP19793 RNA5SP170-201ENST00000517150 101 ntBASIC0.54□□□□□ -2.32
RXRAP19793 RNA5SP47-201ENST00000517230 109 ntBASIC0.54□□□□□ -2.32
RXRAP19793 RNU7-161P-201ENST00000517289 62 ntBASIC0.54□□□□□ -2.32
RXRAP19793 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
RXRAP19793 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
RXRAP19793 RNA5SP517-201ENST00000364724 117 ntBASIC0.53□□□□□ -2.32
RXRAP19793 RNU6-49P-201ENST00000384256 107 ntBASIC0.53□□□□□ -2.32
RXRAP19793 Y_RNA.609-201ENST00000410669 89 ntBASIC0.53□□□□□ -2.32
RXRAP19793 RNU7-85P-201ENST00000458851 63 ntBASIC0.53□□□□□ -2.32
RXRAP19793 SCARNA16.5-201ENST00000517114 183 ntBASIC0.53□□□□□ -2.32
RXRAP19793 AC243829.3-201ENST00000622177 108 ntBASIC0.53□□□□□ -2.32
RXRAP19793 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
RXRAP19793 RNU6-65P-201ENST00000516332 98 ntBASIC0.52□□□□□ -2.33
RXRAP19793 AC026421.1-201ENST00000519101 163 ntBASIC0.52□□□□□ -2.33
RXRAP19793 MIR5582-201ENST00000579697 68 ntBASIC0.52□□□□□ -2.33
RXRAP19793 U6.100-201ENST00000636230 99 ntBASIC0.52□□□□□ -2.33
RXRAP19793 SNORA36.1-201ENST00000363424 132 ntBASIC0.51□□□□□ -2.33
RXRAP19793 MIR518A1-201ENST00000385068 85 ntBASIC0.51□□□□□ -2.33
RXRAP19793 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
RXRAP19793 SNORA40.8-201ENST00000411034 126 ntBASIC0.51□□□□□ -2.33
RXRAP19793 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.51□□□□□ -2.33
RXRAP19793 SNORD4B-201ENST00000459083 72 ntBASIC0.51□□□□□ -2.33
RXRAP19793 RNU6-75P-201ENST00000515944 104 ntBASIC0.51□□□□□ -2.33
RXRAP19793 RNU7-13P-201ENST00000516413 62 ntBASIC0.51□□□□□ -2.33
RXRAP19793 RNU6-844P-201ENST00000517175 102 ntBASIC0.51□□□□□ -2.33
RXRAP19793 MIR4536-1-201ENST00000583537 88 ntBASIC0.51□□□□□ -2.33
RXRAP19793 AC067863.3-201ENST00000624172 122 ntBASIC0.51□□□□□ -2.33
RXRAP19793 SNORD118-201ENST00000363593 134 ntBASIC0.5□□□□□ -2.33
RXRAP19793 MIR548L-201ENST00000408303 86 ntBASIC0.5□□□□□ -2.33
RXRAP19793 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.5□□□□□ -2.33
RXRAP19793 MIR6828-201ENST00000636181 60 ntBASIC0.5□□□□□ -2.33
RXRAP19793 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
RXRAP19793 RNU6-716P-201ENST00000365621 103 ntBASIC0.49□□□□□ -2.33
RXRAP19793 SNORA8.2-201ENST00000384372 139 ntBASIC0.49□□□□□ -2.33
RXRAP19793 Y_RNA.596-201ENST00000410462 109 ntBASIC0.49□□□□□ -2.33
RXRAP19793 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
RXRAP19793 RNA5SP227-201ENST00000516184 113 ntBASIC0.49□□□□□ -2.33
RXRAP19793 RNA5SP268-201ENST00000516828 124 ntBASIC0.49□□□□□ -2.33
RXRAP19793 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.49□□□□□ -2.33
RXRAP19793 RNA5SP457-201ENST00000363657 124 ntBASIC0.48□□□□□ -2.33
RXRAP19793 RNU6-1134P-201ENST00000365156 101 ntBASIC0.48□□□□□ -2.33
RXRAP19793 SNORD115-44-201ENST00000365391 82 ntBASIC0.48□□□□□ -2.33
RXRAP19793 Y_RNA.369-201ENST00000365568 117 ntBASIC0.48□□□□□ -2.33
RXRAP19793 SNORD101-201ENST00000384027 73 ntBASIC0.48□□□□□ -2.33
RXRAP19793 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
RXRAP19793 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
RXRAP19793 MIR3920-201ENST00000581751 86 ntBASIC0.48□□□□□ -2.33
RXRAP19793 MTRNR2L2-201ENST00000604882 87 ntBASIC0.48□□□□□ -2.33
RXRAP19793 MIRLET7F1-201ENST00000362202 87 ntBASIC0.47□□□□□ -2.33
RXRAP19793 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
RXRAP19793 RNU4-32P-201ENST00000363404 141 ntBASIC0.47□□□□□ -2.33
RXRAP19793 RNU6-726P-201ENST00000364680 107 ntBASIC0.47□□□□□ -2.33
RXRAP19793 RNU6-294P-201ENST00000364999 102 ntBASIC0.47□□□□□ -2.33
RXRAP19793 RNU6-811P-201ENST00000384069 107 ntBASIC0.47□□□□□ -2.33
RXRAP19793 SNORD116-22-201ENST00000384430 92 ntBASIC0.47□□□□□ -2.33
RXRAP19793 RNU6-402P-201ENST00000410678 103 ntBASIC0.47□□□□□ -2.33
RXRAP19793 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
RXRAP19793 MIR4668-201ENST00000582284 70 ntBASIC0.47□□□□□ -2.33
RXRAP19793 MIR7107-201ENST00000611489 80 ntBASIC0.47□□□□□ -2.33
RXRAP19793 RNU6-664P-201ENST00000362381 107 ntBASIC0.46□□□□□ -2.34
RXRAP19793 Y_RNA.43-201ENST00000362670 111 ntBASIC0.46□□□□□ -2.34
RXRAP19793 RNU6-1255P-201ENST00000363434 112 ntBASIC0.46□□□□□ -2.34
RXRAP19793 RNU6-132P-201ENST00000383863 107 ntBASIC0.46□□□□□ -2.34
RXRAP19793 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
RXRAP19793 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
RXRAP19793 MIR548U-201ENST00000390728 81 ntBASIC0.46□□□□□ -2.34
RXRAP19793 SNORD41.1-201ENST00000391000 69 ntBASIC0.46□□□□□ -2.34
RXRAP19793 MIR4696-201ENST00000581431 70 ntBASIC0.46□□□□□ -2.34
RXRAP19793 AC104996.3-201ENST00000590718 94 ntBASIC0.46□□□□□ -2.34
RXRAP19793 SNORA25.18-201ENST00000607153 114 ntBASIC0.46□□□□□ -2.34
RXRAP19793 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
RXRAP19793 MIR8087-201ENST00000612745 78 ntBASIC0.46□□□□□ -2.34
RXRAP19793 Y_RNA.115-201ENST00000363272 98 ntBASIC0.45□□□□□ -2.34
RXRAP19793 Y_RNA.207-201ENST00000364142 106 ntBASIC0.45□□□□□ -2.34
RXRAP19793 RNU6-219P-201ENST00000364728 107 ntBASIC0.45□□□□□ -2.34
RXRAP19793 Y_RNA.620-201ENST00000411009 88 ntBASIC0.45□□□□□ -2.34
RXRAP19793 MIR2113-201ENST00000459007 91 ntBASIC0.45□□□□□ -2.34
RXRAP19793 RNU6-287P-201ENST00000516230 98 ntBASIC0.45□□□□□ -2.34
RXRAP19793 MIR3064-201ENST00000581130 66 ntBASIC0.45□□□□□ -2.34
RXRAP19793 MIR548AG2-201ENST00000581228 64 ntBASIC0.45□□□□□ -2.34
RXRAP19793 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.45□□□□□ -2.34
RXRAP19793 Y_RNA.17-201ENST00000362433 111 ntBASIC0.44□□□□□ -2.34
RXRAP19793 Y_RNA.239-201ENST00000364444 113 ntBASIC0.44□□□□□ -2.34
RXRAP19793 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
RXRAP19793 Y_RNA.593-201ENST00000410292 98 ntBASIC0.44□□□□□ -2.34
RXRAP19793 RNU6-935P-201ENST00000410371 100 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms