Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 Y_RNA.205-201ENST00000364128 113 ntBASIC0.89□□□□□ -2.27
ERCC3P19447 Y_RNA.596-201ENST00000410462 109 ntBASIC0.89□□□□□ -2.27
ERCC3P19447 SNORA40.8-201ENST00000411034 126 ntBASIC0.89□□□□□ -2.27
ERCC3P19447 MIR216A-201ENST00000385063 110 ntBASIC0.88□□□□□ -2.27
ERCC3P19447 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.88□□□□□ -2.27
ERCC3P19447 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
ERCC3P19447 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
ERCC3P19447 RNU6-1131P-201ENST00000364955 107 ntBASIC0.87□□□□□ -2.27
ERCC3P19447 MIR488-201ENST00000365739 83 ntBASIC0.87□□□□□ -2.27
ERCC3P19447 RNY1P4-201ENST00000384595 115 ntBASIC0.87□□□□□ -2.27
ERCC3P19447 RNU6-1265P-201ENST00000516342 103 ntBASIC0.87□□□□□ -2.27
ERCC3P19447 RNA5SP121-201ENST00000516537 101 ntBASIC0.87□□□□□ -2.27
ERCC3P19447 MIR7107-201ENST00000611489 80 ntBASIC0.87□□□□□ -2.27
ERCC3P19447 SNORD101-201ENST00000384027 73 ntBASIC0.86□□□□□ -2.27
ERCC3P19447 RNY1P7-201ENST00000384743 110 ntBASIC0.86□□□□□ -2.27
ERCC3P19447 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
ERCC3P19447 RNU7-85P-201ENST00000458851 63 ntBASIC0.86□□□□□ -2.27
ERCC3P19447 RNU4-54P-201ENST00000516428 129 ntBASIC0.86□□□□□ -2.27
ERCC3P19447 RNU6-1057P-201ENST00000517162 102 ntBASIC0.86□□□□□ -2.27
ERCC3P19447 AC026421.1-201ENST00000519101 163 ntBASIC0.86□□□□□ -2.27
ERCC3P19447 MIR6513-201ENST00000621188 64 ntBASIC0.86□□□□□ -2.27
ERCC3P19447 RNU4-32P-201ENST00000363404 141 ntBASIC0.85□□□□□ -2.27
ERCC3P19447 RNU6-726P-201ENST00000364680 107 ntBASIC0.85□□□□□ -2.27
ERCC3P19447 SNORD115-44-201ENST00000365391 82 ntBASIC0.85□□□□□ -2.27
ERCC3P19447 AC018659.1-201ENST00000551083 169 ntBASIC0.85□□□□□ -2.27
ERCC3P19447 MIR6828-201ENST00000636181 60 ntBASIC0.85□□□□□ -2.27
ERCC3P19447 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
ERCC3P19447 SNORD4B-201ENST00000459083 72 ntBASIC0.84□□□□□ -2.27
ERCC3P19447 MIR3920-201ENST00000581751 86 ntBASIC0.84□□□□□ -2.27
ERCC3P19447 MIRLET7F1-201ENST00000362202 87 ntBASIC0.83□□□□□ -2.28
ERCC3P19447 Y_RNA.239-201ENST00000364444 113 ntBASIC0.83□□□□□ -2.28
ERCC3P19447 MIR518A1-201ENST00000385068 85 ntBASIC0.83□□□□□ -2.28
ERCC3P19447 RNU6-287P-201ENST00000516230 98 ntBASIC0.83□□□□□ -2.28
ERCC3P19447 RNU6-664P-201ENST00000362381 107 ntBASIC0.82□□□□□ -2.28
ERCC3P19447 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.82□□□□□ -2.28
ERCC3P19447 MIR548U-201ENST00000390728 81 ntBASIC0.81□□□□□ -2.28
ERCC3P19447 MIR936-201ENST00000401264 98 ntBASIC0.81□□□□□ -2.28
ERCC3P19447 RNU7-74P-201ENST00000459104 62 ntBASIC0.81□□□□□ -2.28
ERCC3P19447 Y_RNA.694-201ENST00000516677 117 ntBASIC0.81□□□□□ -2.28
ERCC3P19447 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.81□□□□□ -2.28
ERCC3P19447 RNU6-1134P-201ENST00000365156 101 ntBASIC0.8□□□□□ -2.28
ERCC3P19447 AC069271.1-201ENST00000445577 156 ntBASIC0.8□□□□□ -2.28
ERCC3P19447 RNU6-75P-201ENST00000515944 104 ntBASIC0.8□□□□□ -2.28
ERCC3P19447 MIR4696-201ENST00000581431 70 ntBASIC0.8□□□□□ -2.28
ERCC3P19447 SNORD118-201ENST00000363593 134 ntBASIC0.79□□□□□ -2.28
ERCC3P19447 Y_RNA.207-201ENST00000364142 106 ntBASIC0.79□□□□□ -2.28
ERCC3P19447 RNU6-811P-201ENST00000384069 107 ntBASIC0.79□□□□□ -2.28
ERCC3P19447 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
ERCC3P19447 MIR2113-201ENST00000459007 91 ntBASIC0.79□□□□□ -2.28
ERCC3P19447 RNU6-1126P-201ENST00000384002 107 ntBASIC0.78□□□□□ -2.28
ERCC3P19447 SNORD41.1-201ENST00000391000 69 ntBASIC0.78□□□□□ -2.28
ERCC3P19447 RNU6-269P-201ENST00000391077 97 ntBASIC0.78□□□□□ -2.28
ERCC3P19447 SNORD116-22-201ENST00000384430 92 ntBASIC0.77□□□□□ -2.29
ERCC3P19447 MIR193B-201ENST00000384907 83 ntBASIC0.77□□□□□ -2.29
ERCC3P19447 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ERCC3P19447 MIR4752-201ENST00000579672 72 ntBASIC0.77□□□□□ -2.29
ERCC3P19447 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.77□□□□□ -2.29
ERCC3P19447 Y_RNA.423-201ENST00000384057 113 ntBASIC0.76□□□□□ -2.29
ERCC3P19447 RNU6-49P-201ENST00000384256 107 ntBASIC0.76□□□□□ -2.29
ERCC3P19447 RNU6-509P-201ENST00000363519 107 ntBASIC0.75□□□□□ -2.29
ERCC3P19447 RNU6-132P-201ENST00000383863 107 ntBASIC0.75□□□□□ -2.29
ERCC3P19447 RNA5SP193-201ENST00000410353 107 ntBASIC0.75□□□□□ -2.29
ERCC3P19447 RN7SKP12-201ENST00000516275 143 ntBASIC0.75□□□□□ -2.29
ERCC3P19447 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
ERCC3P19447 MIR617-201ENST00000385030 97 ntBASIC0.74□□□□□ -2.29
ERCC3P19447 RNU6-935P-201ENST00000410371 100 ntBASIC0.74□□□□□ -2.29
ERCC3P19447 RNA5SP170-201ENST00000517150 101 ntBASIC0.74□□□□□ -2.29
ERCC3P19447 MIR1273G-201ENST00000577677 100 ntBASIC0.74□□□□□ -2.29
ERCC3P19447 MIR4668-201ENST00000582284 70 ntBASIC0.74□□□□□ -2.29
ERCC3P19447 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
ERCC3P19447 RNU2-59P-201ENST00000410482 191 ntBASIC0.73□□□□□ -2.29
ERCC3P19447 RNU6-844P-201ENST00000517175 102 ntBASIC0.73□□□□□ -2.29
ERCC3P19447 MIR4711-201ENST00000578274 70 ntBASIC0.73□□□□□ -2.29
ERCC3P19447 MIR5582-201ENST00000579697 68 ntBASIC0.73□□□□□ -2.29
ERCC3P19447 MIR548AG2-201ENST00000581228 64 ntBASIC0.73□□□□□ -2.29
ERCC3P19447 AC104996.3-201ENST00000590718 94 ntBASIC0.73□□□□□ -2.29
ERCC3P19447 SNORD114-23-201ENST00000363536 72 ntBASIC0.72□□□□□ -2.29
ERCC3P19447 Y_RNA.491-201ENST00000384417 107 ntBASIC0.72□□□□□ -2.29
ERCC3P19447 AC098934.3-201ENST00000430450 190 ntBASIC0.72□□□□□ -2.29
ERCC3P19447 SNORA68.3-201ENST00000515906 83 ntBASIC0.72□□□□□ -2.29
ERCC3P19447 MIR3064-201ENST00000581130 66 ntBASIC0.72□□□□□ -2.29
ERCC3P19447 AL162376.1-201ENST00000624117 175 ntBASIC0.72□□□□□ -2.29
ERCC3P19447 AC010487.4-201ENST00000637027 61 ntBASIC0.72□□□□□ -2.29
ERCC3P19447 MIR451A-201ENST00000385059 72 ntBASIC0.71□□□□□ -2.3
ERCC3P19447 MIR519E-201ENST00000385075 84 ntBASIC0.71□□□□□ -2.3
ERCC3P19447 RNU6-402P-201ENST00000410678 103 ntBASIC0.71□□□□□ -2.3
ERCC3P19447 FGF7P7-201ENST00000514120 227 ntBASIC0.71□□□□□ -2.3
ERCC3P19447 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
ERCC3P19447 MIR1236-201ENST00000408340 102 ntBASIC0.7□□□□□ -2.3
ERCC3P19447 RNU6-1052P-201ENST00000411398 104 ntBASIC0.7□□□□□ -2.3
ERCC3P19447 RNU6-719P-201ENST00000516671 104 ntBASIC0.7□□□□□ -2.3
ERCC3P19447 NAMPTP3-201ENST00000569273 224 ntBASIC0.7□□□□□ -2.3
ERCC3P19447 MTRNR2L2-201ENST00000604882 87 ntBASIC0.7□□□□□ -2.3
ERCC3P19447 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.7□□□□□ -2.3
ERCC3P19447 AC073869.9-201ENST00000641610 120 ntBASIC0.7□□□□□ -2.3
ERCC3P19447 RNA5SP292-201ENST00000390974 118 ntBASIC0.69□□□□□ -2.3
ERCC3P19447 AC006210.1-201ENST00000424882 111 ntBASIC0.69□□□□□ -2.3
ERCC3P19447 RNA5SP484-201ENST00000458857 111 ntBASIC0.69□□□□□ -2.3
ERCC3P19447 RNU6-229P-201ENST00000516614 102 ntBASIC0.69□□□□□ -2.3
ERCC3P19447 RNU7-129P-201ENST00000516128 62 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 370.4 ms