Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SCARNA16.5-201ENST00000517114 183 ntBASIC0.52□□□□□ -2.33
CD53P19397 RNA5SP47-201ENST00000517230 109 ntBASIC0.52□□□□□ -2.33
CD53P19397 RNU6-957P-201ENST00000363652 99 ntBASIC0.51□□□□□ -2.33
CD53P19397 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
CD53P19397 RNA5SP517-201ENST00000364724 117 ntBASIC0.51□□□□□ -2.33
CD53P19397 RNA5SP268-201ENST00000516828 124 ntBASIC0.51□□□□□ -2.33
CD53P19397 SNORA25.18-201ENST00000607153 114 ntBASIC0.51□□□□□ -2.33
CD53P19397 U7.3-201ENST00000616123 62 ntBASIC0.51□□□□□ -2.33
CD53P19397 TRDV1-202ENST00000621643 102 ntBASIC0.51□□□□□ -2.33
CD53P19397 AC067863.3-201ENST00000624172 122 ntBASIC0.51□□□□□ -2.33
CD53P19397 MIR2052-201ENST00000636055 55 ntBASIC0.51□□□□□ -2.33
CD53P19397 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
CD53P19397 SNORA8.2-201ENST00000384372 139 ntBASIC0.5□□□□□ -2.33
CD53P19397 RNA5SP89-201ENST00000410300 108 ntBASIC0.5□□□□□ -2.33
CD53P19397 SNORD71-201ENST00000411292 86 ntBASIC0.5□□□□□ -2.33
CD53P19397 RNU7-13P-201ENST00000516413 62 ntBASIC0.5□□□□□ -2.33
CD53P19397 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
CD53P19397 RNA5SP403-201ENST00000363598 108 ntBASIC0.49□□□□□ -2.33
CD53P19397 SNORD58A-201ENST00000383875 65 ntBASIC0.49□□□□□ -2.33
CD53P19397 Y_RNA.681-201ENST00000516445 113 ntBASIC0.49□□□□□ -2.33
CD53P19397 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
CD53P19397 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.49□□□□□ -2.33
CD53P19397 Y_RNA.283-201ENST00000364798 112 ntBASIC0.48□□□□□ -2.33
CD53P19397 Y_RNA.348-201ENST00000365403 103 ntBASIC0.48□□□□□ -2.33
CD53P19397 Y_RNA.648-201ENST00000459455 110 ntBASIC0.48□□□□□ -2.33
CD53P19397 RNU6-65P-201ENST00000516332 98 ntBASIC0.48□□□□□ -2.33
CD53P19397 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
CD53P19397 RNA5SP257-201ENST00000363023 116 ntBASIC0.47□□□□□ -2.33
CD53P19397 SNORD116-10-201ENST00000363791 102 ntBASIC0.47□□□□□ -2.33
CD53P19397 RNU6-519P-201ENST00000410590 108 ntBASIC0.47□□□□□ -2.33
CD53P19397 SNORA40.8-201ENST00000411034 126 ntBASIC0.47□□□□□ -2.33
CD53P19397 RNU6-158P-201ENST00000517104 100 ntBASIC0.47□□□□□ -2.33
CD53P19397 MIR4536-1-201ENST00000583537 88 ntBASIC0.47□□□□□ -2.33
CD53P19397 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.47□□□□□ -2.33
CD53P19397 MIR7107-201ENST00000611489 80 ntBASIC0.47□□□□□ -2.33
CD53P19397 U6.100-201ENST00000636230 99 ntBASIC0.47□□□□□ -2.33
CD53P19397 AC090625.1-201ENST00000357130 210 ntBASIC0.46□□□□□ -2.34
CD53P19397 Y_RNA.68-201ENST00000362881 102 ntBASIC0.46□□□□□ -2.34
CD53P19397 Y_RNA.190-201ENST00000363964 101 ntBASIC0.46□□□□□ -2.34
CD53P19397 Y_RNA.290-201ENST00000364879 114 ntBASIC0.46□□□□□ -2.34
CD53P19397 RNU6-905P-201ENST00000384434 107 ntBASIC0.46□□□□□ -2.34
CD53P19397 MIR1197-201ENST00000408818 88 ntBASIC0.46□□□□□ -2.34
CD53P19397 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
CD53P19397 RNU6-1265P-201ENST00000516342 103 ntBASIC0.46□□□□□ -2.34
CD53P19397 MIRLET7D-201ENST00000362263 87 ntBASIC0.45□□□□□ -2.34
CD53P19397 RNU6-640P-201ENST00000363693 105 ntBASIC0.45□□□□□ -2.34
CD53P19397 Y_RNA.178-201ENST00000363832 102 ntBASIC0.45□□□□□ -2.34
CD53P19397 RNU6-726P-201ENST00000364680 107 ntBASIC0.45□□□□□ -2.34
CD53P19397 Y_RNA.609-201ENST00000410669 89 ntBASIC0.45□□□□□ -2.34
CD53P19397 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
CD53P19397 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.45□□□□□ -2.34
CD53P19397 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
CD53P19397 MALAT1.1-201ENST00000618249 95 ntBASIC0.45□□□□□ -2.34
CD53P19397 MIR6828-201ENST00000636181 60 ntBASIC0.45□□□□□ -2.34
CD53P19397 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
CD53P19397 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
CD53P19397 RNY4P30-201ENST00000410216 95 ntBASIC0.44□□□□□ -2.34
CD53P19397 Y_RNA.596-201ENST00000410462 109 ntBASIC0.44□□□□□ -2.34
CD53P19397 RNU7-85P-201ENST00000458851 63 ntBASIC0.44□□□□□ -2.34
CD53P19397 MIR3920-201ENST00000581751 86 ntBASIC0.44□□□□□ -2.34
CD53P19397 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
CD53P19397 SNORD118-201ENST00000363593 134 ntBASIC0.43□□□□□ -2.34
CD53P19397 SNORD101-201ENST00000384027 73 ntBASIC0.43□□□□□ -2.34
CD53P19397 AC069271.1-201ENST00000445577 156 ntBASIC0.43□□□□□ -2.34
CD53P19397 AC026421.1-201ENST00000519101 163 ntBASIC0.43□□□□□ -2.34
CD53P19397 MIRLET7F1-201ENST00000362202 87 ntBASIC0.42□□□□□ -2.34
CD53P19397 Y_RNA.220-201ENST00000364244 109 ntBASIC0.42□□□□□ -2.34
CD53P19397 SNORD115-44-201ENST00000365391 82 ntBASIC0.42□□□□□ -2.34
CD53P19397 MIR488-201ENST00000365739 83 ntBASIC0.42□□□□□ -2.34
CD53P19397 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
CD53P19397 RNU6-287P-201ENST00000516230 98 ntBASIC0.42□□□□□ -2.34
CD53P19397 MIR4752-201ENST00000579672 72 ntBASIC0.42□□□□□ -2.34
CD53P19397 RNU6-664P-201ENST00000362381 107 ntBASIC0.41□□□□□ -2.34
CD53P19397 RNU4-32P-201ENST00000363404 141 ntBASIC0.41□□□□□ -2.34
CD53P19397 RNU6-1131P-201ENST00000364955 107 ntBASIC0.41□□□□□ -2.34
CD53P19397 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
CD53P19397 RNU6-1126P-201ENST00000384002 107 ntBASIC0.41□□□□□ -2.34
CD53P19397 Y_RNA.423-201ENST00000384057 113 ntBASIC0.41□□□□□ -2.34
CD53P19397 SNORD41.1-201ENST00000391000 69 ntBASIC0.41□□□□□ -2.34
CD53P19397 RNU6-269P-201ENST00000391077 97 ntBASIC0.41□□□□□ -2.34
CD53P19397 SNORD4B-201ENST00000459083 72 ntBASIC0.41□□□□□ -2.34
CD53P19397 RNU6-75P-201ENST00000515944 104 ntBASIC0.41□□□□□ -2.34
CD53P19397 RNA5SP134-201ENST00000516492 96 ntBASIC0.41□□□□□ -2.34
CD53P19397 RNU6-1057P-201ENST00000517162 102 ntBASIC0.41□□□□□ -2.34
CD53P19397 Y_RNA.207-201ENST00000364142 106 ntBASIC0.4□□□□□ -2.35
CD53P19397 Y_RNA.239-201ENST00000364444 113 ntBASIC0.4□□□□□ -2.35
CD53P19397 RNY1P7-201ENST00000384743 110 ntBASIC0.4□□□□□ -2.35
CD53P19397 MIR2113-201ENST00000459007 91 ntBASIC0.4□□□□□ -2.35
CD53P19397 RNU7-74P-201ENST00000459104 62 ntBASIC0.4□□□□□ -2.35
CD53P19397 MIR4696-201ENST00000581431 70 ntBASIC0.4□□□□□ -2.35
CD53P19397 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.4□□□□□ -2.35
CD53P19397 Y_RNA.433-201ENST00000384089 102 ntBASIC0.39□□□□□ -2.35
CD53P19397 MIR548AG2-201ENST00000581228 64 ntBASIC0.39□□□□□ -2.35
CD53P19397 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.39□□□□□ -2.35
CD53P19397 MIR2909-201ENST00000617113 69 ntBASIC0.39□□□□□ -2.35
CD53P19397 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
CD53P19397 RNU6-811P-201ENST00000384069 107 ntBASIC0.38□□□□□ -2.35
CD53P19397 MIR548U-201ENST00000390728 81 ntBASIC0.38□□□□□ -2.35
CD53P19397 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CD53P19397 RNU2-59P-201ENST00000410482 191 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms