Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 RNA5SP292-201ENST00000390974 118 ntBASIC1.25□□□□□ -2.21
COL6A1P12109 RNU6-129P-201ENST00000391022 107 ntBASIC1.25□□□□□ -2.21
COL6A1P12109 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.25□□□□□ -2.21
COL6A1P12109 FABP5P4-201ENST00000437203 171 ntBASIC1.25□□□□□ -2.21
COL6A1P12109 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
COL6A1P12109 MIRLET7F1-201ENST00000362202 87 ntBASIC1.24□□□□□ -2.21
COL6A1P12109 Y_RNA.174-201ENST00000363781 105 ntBASIC1.24□□□□□ -2.21
COL6A1P12109 Y_RNA.244-201ENST00000364484 109 ntBASIC1.24□□□□□ -2.21
COL6A1P12109 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
COL6A1P12109 RNU6-132P-201ENST00000383863 107 ntBASIC1.24□□□□□ -2.21
COL6A1P12109 MIR19B1-201ENST00000384829 87 ntBASIC1.24□□□□□ -2.21
COL6A1P12109 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.24□□□□□ -2.21
COL6A1P12109 AC211469.2-201ENST00000605461 205 ntBASIC1.24□□□□□ -2.21
COL6A1P12109 RNU6-315P-201ENST00000362666 107 ntBASIC1.23□□□□□ -2.21
COL6A1P12109 Y_RNA.239-201ENST00000364444 113 ntBASIC1.23□□□□□ -2.21
COL6A1P12109 MIR200A-201ENST00000384875 90 ntBASIC1.23□□□□□ -2.21
COL6A1P12109 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL6A1P12109 RNU6-380P-201ENST00000410207 107 ntBASIC1.23□□□□□ -2.21
COL6A1P12109 AC244505.6-201ENST00000452829 130 ntBASIC1.23□□□□□ -2.21
COL6A1P12109 MIR4712-201ENST00000583750 82 ntBASIC1.23□□□□□ -2.21
COL6A1P12109 RNU6-624P-201ENST00000363411 107 ntBASIC1.22□□□□□ -2.21
COL6A1P12109 SNORD101-201ENST00000384027 73 ntBASIC1.22□□□□□ -2.21
COL6A1P12109 FGF7P7-201ENST00000514120 227 ntBASIC1.22□□□□□ -2.21
COL6A1P12109 Y_RNA.660-201ENST00000516002 120 ntBASIC1.22□□□□□ -2.21
COL6A1P12109 RNU6-1110P-201ENST00000516462 101 ntBASIC1.22□□□□□ -2.21
COL6A1P12109 RNA5SP245-201ENST00000364239 121 ntBASIC1.21□□□□□ -2.22
COL6A1P12109 MIR520H-201ENST00000385126 88 ntBASIC1.21□□□□□ -2.22
COL6A1P12109 MIR942-201ENST00000401111 86 ntBASIC1.21□□□□□ -2.22
COL6A1P12109 Y_RNA.596-201ENST00000410462 109 ntBASIC1.21□□□□□ -2.22
COL6A1P12109 AL606490.4-201ENST00000423117 127 ntBASIC1.21□□□□□ -2.22
COL6A1P12109 CYP3A137P-201ENST00000562436 69 ntBASIC1.21□□□□□ -2.22
COL6A1P12109 RNU6-664P-201ENST00000362381 107 ntBASIC1.2□□□□□ -2.22
COL6A1P12109 Y_RNA.94-201ENST00000363068 106 ntBASIC1.2□□□□□ -2.22
COL6A1P12109 U7.7-201ENST00000459276 60 ntBASIC1.2□□□□□ -2.22
COL6A1P12109 RNU6-557P-201ENST00000516842 110 ntBASIC1.2□□□□□ -2.22
COL6A1P12109 SNORA63.2-201ENST00000362603 126 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 Y_RNA.221-201ENST00000364248 96 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 RNY4P3-201ENST00000365254 95 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 MIR216A-201ENST00000385063 110 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL6A1P12109 SNORD89-201ENST00000390981 114 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 AL450471.1-201ENST00000447509 127 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 RNU6-1265P-201ENST00000516342 103 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 uc_338.16-201ENST00000621804 95 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 U6.100-201ENST00000636230 99 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 MIR4662A-201ENST00000637499 67 ntBASIC1.19□□□□□ -2.22
COL6A1P12109 RNU6-1094P-201ENST00000362416 104 ntBASIC1.18□□□□□ -2.22
COL6A1P12109 Y_RNA.30-201ENST00000362572 97 ntBASIC1.18□□□□□ -2.22
COL6A1P12109 Y_RNA.32-201ENST00000362589 110 ntBASIC1.18□□□□□ -2.22
COL6A1P12109 Y_RNA.264-201ENST00000364665 102 ntBASIC1.18□□□□□ -2.22
COL6A1P12109 RNA5SP117-201ENST00000365294 118 ntBASIC1.18□□□□□ -2.22
COL6A1P12109 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A1P12109 SNORA31.14-201ENST00000516728 116 ntBASIC1.18□□□□□ -2.22
COL6A1P12109 MIR3973-201ENST00000579824 107 ntBASIC1.18□□□□□ -2.22
COL6A1P12109 MIR4696-201ENST00000581431 70 ntBASIC1.18□□□□□ -2.22
COL6A1P12109 RNU5F-1-201ENST00000362507 117 ntBASIC1.17□□□□□ -2.22
COL6A1P12109 RNU6-686P-201ENST00000364839 107 ntBASIC1.17□□□□□ -2.22
COL6A1P12109 SNORD115-44-201ENST00000365391 82 ntBASIC1.17□□□□□ -2.22
COL6A1P12109 SNORD105-201ENST00000386910 85 ntBASIC1.17□□□□□ -2.22
COL6A1P12109 RNU6-135P-201ENST00000516769 101 ntBASIC1.17□□□□□ -2.22
COL6A1P12109 MTRNR2L2-201ENST00000604882 87 ntBASIC1.17□□□□□ -2.22
COL6A1P12109 RNU6-478P-201ENST00000363904 110 ntBASIC1.16□□□□□ -2.22
COL6A1P12109 SNORD77.2-201ENST00000391045 68 ntBASIC1.16□□□□□ -2.22
COL6A1P12109 RNU6-935P-201ENST00000410371 100 ntBASIC1.16□□□□□ -2.22
COL6A1P12109 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
COL6A1P12109 RNU6-469P-201ENST00000516253 101 ntBASIC1.16□□□□□ -2.22
COL6A1P12109 RNU6-1057P-201ENST00000517162 102 ntBASIC1.16□□□□□ -2.22
COL6A1P12109 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.16□□□□□ -2.22
COL6A1P12109 RNU6-161P-201ENST00000363051 106 ntBASIC1.15□□□□□ -2.23
COL6A1P12109 SNORD115-24-201ENST00000363528 82 ntBASIC1.15□□□□□ -2.23
COL6A1P12109 AC002350.1-201ENST00000490759 375 ntBASIC1.15□□□□□ -2.23
COL6A1P12109 RNU6-1108P-201ENST00000516308 104 ntBASIC1.15□□□□□ -2.23
COL6A1P12109 RNU7-13P-201ENST00000516413 62 ntBASIC1.15□□□□□ -2.23
COL6A1P12109 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
COL6A1P12109 MIR6857-201ENST00000613267 93 ntBASIC1.15□□□□□ -2.23
COL6A1P12109 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
COL6A1P12109 RNU6-208P-201ENST00000362431 107 ntBASIC1.14□□□□□ -2.23
COL6A1P12109 RNU6-1051P-201ENST00000365471 102 ntBASIC1.14□□□□□ -2.23
COL6A1P12109 RNU6-1296P-201ENST00000383879 107 ntBASIC1.14□□□□□ -2.23
COL6A1P12109 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
COL6A1P12109 AC025627.3-201ENST00000582078 182 ntBASIC1.14□□□□□ -2.23
COL6A1P12109 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A1P12109 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.14□□□□□ -2.23
COL6A1P12109 MIRLET7A1-201ENST00000362295 80 ntBASIC1.13□□□□□ -2.23
COL6A1P12109 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
COL6A1P12109 Y_RNA.207-201ENST00000364142 106 ntBASIC1.12□□□□□ -2.23
COL6A1P12109 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
COL6A1P12109 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.12□□□□□ -2.23
COL6A1P12109 RNA5SP403-201ENST00000363598 108 ntBASIC1.11□□□□□ -2.23
COL6A1P12109 Y_RNA.178-201ENST00000363832 102 ntBASIC1.11□□□□□ -2.23
COL6A1P12109 RNU6-776P-201ENST00000364403 104 ntBASIC1.11□□□□□ -2.23
COL6A1P12109 RNU6-1022P-201ENST00000365049 104 ntBASIC1.11□□□□□ -2.23
COL6A1P12109 MIR451A-201ENST00000385059 72 ntBASIC1.11□□□□□ -2.23
COL6A1P12109 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
COL6A1P12109 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.11□□□□□ -2.23
COL6A1P12109 RNU6-807P-201ENST00000516805 107 ntBASIC1.11□□□□□ -2.23
COL6A1P12109 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.11□□□□□ -2.23
COL6A1P12109 RNU6-1229P-201ENST00000364295 107 ntBASIC1.1□□□□□ -2.23
COL6A1P12109 RNU7-104P-201ENST00000459398 79 ntBASIC1.1□□□□□ -2.23
COL6A1P12109 RNU6-287P-201ENST00000516230 98 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms