Protein–RNA interactions for Protein: P0CI25

TRIM49, Tripartite motif-containing protein 49, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49P0CI25 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
TRIM49P0CI25 MIR488-201ENST00000365739 83 ntBASIC0.39□□□□□ -2.35
TRIM49P0CI25 RNU6-269P-201ENST00000391077 97 ntBASIC0.39□□□□□ -2.35
TRIM49P0CI25 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
TRIM49P0CI25 U7.3-201ENST00000616123 62 ntBASIC0.39□□□□□ -2.35
TRIM49P0CI25 MIRLET7F1-201ENST00000362202 87 ntBASIC0.38□□□□□ -2.35
TRIM49P0CI25 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
TRIM49P0CI25 RNU6-153P-201ENST00000364422 104 ntBASIC0.38□□□□□ -2.35
TRIM49P0CI25 Y_RNA.283-201ENST00000364798 112 ntBASIC0.38□□□□□ -2.35
TRIM49P0CI25 Y_RNA.290-201ENST00000364879 114 ntBASIC0.38□□□□□ -2.35
TRIM49P0CI25 RNA5SP330-201ENST00000517096 96 ntBASIC0.38□□□□□ -2.35
TRIM49P0CI25 RNU7-10P-201ENST00000607194 63 ntBASIC0.38□□□□□ -2.35
TRIM49P0CI25 MIR924-201ENST00000638017 53 ntBASIC0.38□□□□□ -2.35
TRIM49P0CI25 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 RNU4-45P-201ENST00000365469 141 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 RNU6-132P-201ENST00000383863 107 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 Y_RNA.423-201ENST00000384057 113 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 RNU6-905P-201ENST00000384434 107 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 MIR548L-201ENST00000408303 86 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 AP001318.4-201ENST00000616637 121 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
TRIM49P0CI25 MIR330-201ENST00000362196 94 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 Y_RNA.495-201ENST00000384435 112 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 RNY1P7-201ENST00000384743 110 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 SNORD90-201ENST00000391145 111 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 RNA5SP89-201ENST00000410300 108 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 RNA5SP484-201ENST00000458857 111 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 RNU7-13P-201ENST00000516413 62 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 AC026421.1-201ENST00000519101 163 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 AC067863.3-201ENST00000624172 122 ntBASIC0.36□□□□□ -2.35
TRIM49P0CI25 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TRIM49P0CI25 Y_RNA.81-201ENST00000362997 102 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 RNU6-1125P-201ENST00000363601 107 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 RNU6-1126P-201ENST00000384002 107 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 RNU6-480P-201ENST00000384332 107 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 MTATP8P2-201ENST00000435212 202 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 RNU6-287P-201ENST00000516230 98 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 MIR8087-201ENST00000612745 78 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 AL162376.1-201ENST00000624117 175 ntBASIC0.35□□□□□ -2.35
TRIM49P0CI25 Y_RNA.10-201ENST00000362371 110 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 SNORD58A-201ENST00000383875 65 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 RNU6-815P-201ENST00000384080 113 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 MIR519E-201ENST00000385075 84 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 SNORD41.1-201ENST00000391000 69 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 RNU6-887P-201ENST00000410660 100 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.34□□□□□ -2.36
TRIM49P0CI25 Y_RNA.648-201ENST00000459455 110 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 RN7SKP12-201ENST00000516275 143 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 RNU6-135P-201ENST00000516769 101 ntBASIC0.34□□□□□ -2.36
TRIM49P0CI25 Y_RNA.115-201ENST00000363272 98 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 RNA5SP457-201ENST00000363657 124 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 Y_RNA.207-201ENST00000364142 106 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 RNA5SP292-201ENST00000390974 118 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 RNU6-466P-201ENST00000391224 103 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 SNORD71-201ENST00000411292 86 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 MIR2113-201ENST00000459007 91 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 Y_RNA.705-201ENST00000516862 110 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 NAMPTP3-201ENST00000569273 224 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 MIR4696-201ENST00000581431 70 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 Y_RNA.818-201ENST00000618813 71 ntBASIC0.33□□□□□ -2.36
TRIM49P0CI25 Y_RNA.93-201ENST00000363066 109 ntBASIC0.32□□□□□ -2.36
TRIM49P0CI25 SNORD115-27-201ENST00000364430 82 ntBASIC0.32□□□□□ -2.36
TRIM49P0CI25 Y_RNA.609-201ENST00000410669 89 ntBASIC0.32□□□□□ -2.36
TRIM49P0CI25 SNORD4B-201ENST00000459083 72 ntBASIC0.32□□□□□ -2.36
TRIM49P0CI25 RNU6-168P-201ENST00000516189 101 ntBASIC0.32□□□□□ -2.36
TRIM49P0CI25 MIR4439-201ENST00000583746 80 ntBASIC0.32□□□□□ -2.36
TRIM49P0CI25 RNU6-32P-201ENST00000383948 107 ntBASIC0.31□□□□□ -2.36
TRIM49P0CI25 RNU6-13P-201ENST00000384248 107 ntBASIC0.31□□□□□ -2.36
TRIM49P0CI25 RNU6-12P-201ENST00000384604 107 ntBASIC0.31□□□□□ -2.36
TRIM49P0CI25 RNU6-41P-201ENST00000384741 107 ntBASIC0.31□□□□□ -2.36
TRIM49P0CI25 RNU7-129P-201ENST00000516128 62 ntBASIC0.31□□□□□ -2.36
TRIM49P0CI25 MTRNR2L2-201ENST00000604882 87 ntBASIC0.31□□□□□ -2.36
TRIM49P0CI25 MALAT1.1-201ENST00000618249 95 ntBASIC0.31□□□□□ -2.36
TRIM49P0CI25 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.31□□□□□ -2.36
TRIM49P0CI25 MIR499B-201ENST00000636498 73 ntBASIC0.31□□□□□ -2.36
TRIM49P0CI25 SNORD101-201ENST00000384027 73 ntBASIC0.3□□□□□ -2.36
TRIM49P0CI25 RNU6-49P-201ENST00000384256 107 ntBASIC0.3□□□□□ -2.36
TRIM49P0CI25 RNU6-1113P-201ENST00000384348 107 ntBASIC0.3□□□□□ -2.36
TRIM49P0CI25 Y_RNA.544-201ENST00000384650 113 ntBASIC0.3□□□□□ -2.36
TRIM49P0CI25 MIR1197-201ENST00000408818 88 ntBASIC0.3□□□□□ -2.36
TRIM49P0CI25 Y_RNA.596-201ENST00000410462 109 ntBASIC0.3□□□□□ -2.36
TRIM49P0CI25 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
TRIM49P0CI25 RNU6-664P-201ENST00000362381 107 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 RNU4-32P-201ENST00000363404 141 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 RNU6-1131P-201ENST00000364955 107 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 SNORA2A-201ENST00000383885 135 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 MIR760-201ENST00000390220 80 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 RNU6-1052P-201ENST00000411398 104 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 Y_RNA.677-201ENST00000516401 85 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 RNU6-719P-201ENST00000516671 104 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 MIR4514-201ENST00000581410 57 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 MIR3140-201ENST00000583685 90 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 AL109933.3-201ENST00000619095 188 ntBASIC0.29□□□□□ -2.36
TRIM49P0CI25 Y_RNA.30-201ENST00000362572 97 ntBASIC0.28□□□□□ -2.36
TRIM49P0CI25 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms